Gchil3058.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male
|
Overview
Homology
BLAST of Gchil3058.t1 vs. uniprot
Match: A0A2V3J4D4_9FLOR (Cytochrome c oxidase assembly protein COX20, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4D4_9FLOR) HSP 1 Score: 137 bits (344), Expect = 2.590e-39 Identity = 67/110 (60.91%), Postives = 88/110 (80.00%), Query Frame = 0
Query: 5 DRSDVG-DEEQGNYSFLFELWSAPCFRESTMYGIGGGVAIGSMQMLRSKAIMESAETMVKTGCAISLLSWMICRRRYYQEREATYETMEKLKRRQAQAAAARANKHRPQR 113
D+ +V D + SF+++L SAPCFR ST+YGIGGG AIG+M +LR++++M SAETMVKTGCAISLLSW++CR++YY ERE TY ME+L++RQA AAA RA + R QR
Sbjct: 3 DKKEVSSDGARSEMSFMYDLTSAPCFRRSTLYGIGGGAAIGAMHLLRTRSVMPSAETMVKTGCAISLLSWVVCRKQYYDEREVTYGAMEQLRKRQAAAAAKRAQQLRTQR 112
BLAST of Gchil3058.t1 vs. uniprot
Match: A0A1X6NLZ9_PORUM (Cytochrome c oxidase assembly protein COX20, mitochondrial n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NLZ9_PORUM) HSP 1 Score: 65.1 bits (157), Expect = 1.310e-10 Identity = 29/91 (31.87%), Postives = 53/91 (58.24%), Query Frame = 0
Query: 13 EQGNYSFLFELWSAPCFRESTMYGIGGGVAIGSMQMLRSKAIMESAETMVKTGCAISLLSWMICRRRYYQEREATYETMEKLKRRQAQAAA 103
++ +++FL EL PCFRES +YG GGG +G++ R+++ +A+ VK + W++CRR Y +R + +++ + R A+ A
Sbjct: 40 DEDSFAFLHELHRVPCFRESVLYGGGGGALLGALHFQRTRSGERAADVAVKASLVFASAYWLMCRRNYRAQRASVRTSIDAVGRAAAEGVA 130
BLAST of Gchil3058.t1 vs. uniprot
Match: A0A7S0YK55_9CRYP (Cytochrome c oxidase assembly protein COX20, mitochondrial n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0YK55_9CRYP) HSP 1 Score: 57.4 bits (137), Expect = 4.750e-8 Identity = 34/96 (35.42%), Postives = 53/96 (55.21%), Query Frame = 0
Query: 21 FELWSAPCFRESTMYGIGGGVAIGSMQMLRSKAIMESAETMVKTGCAISLLSWMICRRRYYQEREATYETMEKLKRRQAQAAAARANKHRPQRERS 116
+ L SAPCFRE+ M+ IGG +GS+Q++R + M+ V T +SL W +CR +A E + + RQAQ RAN+ + +E++
Sbjct: 35 WNLRSAPCFRETMMWSIGGSSLMGSLQIIRRRPAMQIGNVFVGTFTFLSLACWGVCRYETSMRHKAVSEAIVEQNSRQAQIE--RANREQAAKEKA 128
BLAST of Gchil3058.t1 vs. uniprot
Match: A0A7S0ZEF4_9RHOD (Cytochrome c oxidase assembly protein COX20, mitochondrial n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZEF4_9RHOD) HSP 1 Score: 56.6 bits (135), Expect = 1.120e-7 Identity = 27/86 (31.40%), Postives = 46/86 (53.49%), Query Frame = 0
Query: 11 DEEQGNYSFLFELWSAPCFRESTMYGIGGGVAIGSMQMLRSKAIMESAETMVKTGCAISLLSWMICRRRYYQEREATYETMEKLKR 96
D + +FLF+L PCFR+S ++G+ G A+G+ + R + ++A+ VK S +W CR Y Q R+ E ++ +R
Sbjct: 31 DIDASQLNFLFQLAKVPCFRDSLLFGMPAGFALGAFRFYRIRDADKAADLTVKGMLLFSAAAWTACRYEYRQRRKTIREAFDEQQR 116
BLAST of Gchil3058.t1 vs. uniprot
Match: A0A0G4IHL0_PLABS (Cytochrome c oxidase assembly protein COX20, mitochondrial n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IHL0_PLABS) HSP 1 Score: 53.1 bits (126), Expect = 1.810e-6 Identity = 21/74 (28.38%), Postives = 48/74 (64.86%), Query Frame = 0
Query: 20 LFELWSAPCFRESTMYGIGGGVAIGSMQMLRSKAIMESAETMVKTGCAISLLSWMICRRRYYQEREATYETMEK 93
+F + PCFR + ++GI G+A+G+ + R++++ + + +KT +SL++W++CRR +++ + A M++
Sbjct: 37 MFSVKRMPCFRNACLWGIFTGLAMGAHRYRRTQSLWLATDRGIKTMLGMSLVTWVMCRRSFFERKAAIDSIMKR 110 The following BLAST results are available for this feature:
BLAST of Gchil3058.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Gchil3058.t1 ID=Gchil3058.t1|Name=Gchil3058.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=124bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
|