Gchil7389.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7389.t1
Unique NameGchil7389.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length636
Homology
BLAST of Gchil7389.t1 vs. uniprot
Match: A0A2V3J5V5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5V5_9FLOR)

HSP 1 Score: 281 bits (720), Expect = 8.770e-87
Identity = 150/303 (49.50%), Postives = 197/303 (65.02%), Query Frame = 0
Query:  333 ALGDDNESLHAYIAATHQTLFAQFSALVFGDATVAKAAFRGALAVQGRAELSHFDIGADQTCDVTRPTLLVRGALVARAGALHGGHAVVGARSRLHHSVQRTCSQRVEAYDAVHTAAHLDFDAARRAVLRETAELCVAHSSGHVTLRNDTLLLTPRSRARSVSCYALFHVRAADLRLARRWRLLSPRDDDDDQXXXXXXXXXXXXXXXQRWGGRSAFRNVVLVVSGMRAELRDVRMRAFNARRTLLVFCAVYGTLDMYNVKLRASVLAPTASLTAMDSVVNGSLVVGGLRGSLAALHAAYATC 635
            A  D+ ES++AYIAA H+ +F QF+ LV GD +VAKAAFRGA+AVQG+AEL+ FD+G+D  CD     + V   L AR G+++GG+ VVG  S++HHSV   CS RVE YD+VH    ++F   RR+VLRE AE+CV+  +G V   N+TL   P  +    SCY  F V   DLRL +RW                             + G   +RN+V+VVSG+R+E RD+RM  FN RRTL+VFCAVYG+ ++YN K++ASVLAPTAS+T MDS+VNGSL++G LRGSLA L+  Y TC
Sbjct:   20 ATSDETESINAYIAAAHERIFKQFNVLVLGDLSVAKAAFRGAIAVQGKAELADFDVGSDLGCDKDFRAVTVGKTLNARMGSVNGGYTVVGRGSKVHHSVSMKCSNRVEQYDSVHNG-DVEFSEVRRSVLREAAEMCVSTPTGTVESANETLRFVPGEKG--FSCYTFFKVSTDDLRLVQRWE----------------------------YAGDDYYRNIVIVVSGLRSEFRDLRMHGFNPRRTLIVFCAVYGSFELYNAKVQASVLAPTASITTMDSIVNGSLIIGALRGSLATLNVPYVTC 291          
BLAST of Gchil7389.t1 vs. uniprot
Match: A0A2V3J6P3_9FLOR (Desert hedgehog protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J6P3_9FLOR)

HSP 1 Score: 267 bits (682), Expect = 6.360e-79
Identity = 152/294 (51.70%), Postives = 186/294 (63.27%), Query Frame = 0
Query:   34 KLSISLSDLTDGLFTSVSQYVPHSSCALLSAEYTRILHTTQGMRMPHSTMMVDGMRCGQLPPNATDEQLYTDSYMQLVPIDALRDEDSARAQNAYNVFYELMVQSRPIPRSFLQFMQRERAERALQTYVGLERFAARECGNGREMVQLARGTVVFFGSVGGKNVSISALIDGVAGGRDVYLPPQSPYHVSFSARAAAA--EGVCALKLDWRNRASSTANKDXXXXXXXXXXXXXNARMCFPAAATVVMAKSGARRRMEALRVGDVVRARSHGGGDLNSAVFALSHADGATHTTM 325
            K SI+LSDLTDG FTS+S  VP +SC + S EYT IL T  G R+PHS + +DG+RCG +P NAT +QLY DSYM+L+ I+AL+ E SAR  N Y  FYEL V SRP P+SF  FM RE +ER + TY+G ER+  R C NG+E+V L R ++VF G+V GKNVS++ LI  +  G  VYLPP SPY +SFS     A  E VC LKLDWR R SS                  N RMCFPA AT+    +G   RM+ L+VGDVVRA   G    N+ VF  SH D  T +TM
Sbjct:   26 KGSITLSDLTDGPFTSLSYDVPQTSCPMSSVEYTYILSTPSGSRIPHSRIYMDGLRCGNVPDNATVDQLYKDSYMELMSIEALQSEQSARDNNVYRAFYELTVLSRPFPKSFFDFMSREFSERKVNTYIGFERYKDRVCSNGKEIVTLRRNSLVFIGAVAGKNVSVTQLITRLTKGAQVYLPPNSPYQISFSPAGGKADPEHVCPLKLDWRARISSQ-----NINSTATPTPSANVRMCFPAHATLD-GVNGETYRMDRLQVGDVVRAPFGG----NTEVFMFSHNDRRTFSTM 309          
BLAST of Gchil7389.t1 vs. uniprot
Match: R7QSE3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QSE3_CHOCR)

HSP 1 Score: 247 bits (630), Expect = 1.770e-73
Identity = 133/302 (44.04%), Postives = 180/302 (59.60%), Query Frame = 0
Query:  334 LGDDNESLHAYIAATHQTLFAQFSALVFGDATVAKAAFRGALAVQGRAELSHFDIGADQTCDVTRPTLLVRGALVARAGALHGGHAVVGARSRLHHSVQRTCSQRVEAYDAVHTAAHLDFDAARRAVLRETAELCVAHSSGHVTLRNDTLLLTPRSRARSVSCYALFHVRAADLRLARRWRLLSPRDDDDDQXXXXXXXXXXXXXXXQRWGGRSAFRNVVLVVSGMRAELRDVRMRAFNARRTLLVFCAVYGTLDMYNVKLRASVLAPTASLTAMDSVVNGSLVVGGLRGSLAALHAAYATC 635
            L   +ES+ AYI A+H+ LF+ ++ ++FGD  +A+AA +G LAVQG AEL+ FD+  +  CD     L+V G L AR GA++ G+ VVG+RSR+ HSV+ TC+ RVE YD       ++FD  R  VLRET ++CV   +G V   N T+   P       SCY  F VR  +LRL  +W                             + G   +RN+V+VVSG++ + RD  M  FNARRTL+VFCAVYG+  +YN KL AS+LAPTAS T  ++++NGS+V G LRGSLA LH  Y TC
Sbjct:   20 LAGPSESVDAYIPASHKKLFSDYNVVIFGDVALARAAIKGPLAVQGSAELADFDVAGNGNCDKDARALVVAGKLTARMGAVNSGYTVVGSRSRIDHSVKMTCTSRVEQYDPQRNG-DIEFDVLRGNVLRETGDMCVTSPTGEVESENGTMTFRPGDPG--FSCYTFFKVRTDELRLITKWV----------------------------YAGDDFYRNIVIVVSGLKVDFRDFGMEGFNARRTLIVFCAVYGSFGLYNAKLHASLLAPTASFTTSNAIINGSVVAGNLRGSLATLHTNYVTC 290          
The following BLAST results are available for this feature:
BLAST of Gchil7389.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3J5V5_9FLOR8.770e-8749.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3J6P3_9FLOR6.360e-7951.70Desert hedgehog protein n=1 Tax=Gracilariopsis cho... [more]
R7QSE3_CHOCR1.770e-7344.04Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR026588Choice-of-anchor A domainTIGRFAMTIGR04215TIGR04215coord: 355..623
e-value: 3.2E-14
score: 51.2
NoneNo IPR availableGENE3D2.170.16.10Hedgehog/Intein (Hint) domaincoord: 270..353
e-value: 8.5E-6
score: 28.2
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 521..538
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 520..541
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..635
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:832830..835479 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7389.t1Gchil7389.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 832830..835479 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7389.t1 ID=Gchil7389.t1|Name=Gchil7389.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=636bp
MMVLTKLLLTGATTLVLLATLVLRARGVPLVDGKLSISLSDLTDGLFTSV
SQYVPHSSCALLSAEYTRILHTTQGMRMPHSTMMVDGMRCGQLPPNATDE
QLYTDSYMQLVPIDALRDEDSARAQNAYNVFYELMVQSRPIPRSFLQFMQ
RERAERALQTYVGLERFAARECGNGREMVQLARGTVVFFGSVGGKNVSIS
ALIDGVAGGRDVYLPPQSPYHVSFSARAAAAEGVCALKLDWRNRASSTAN
KDDDDDDDKDDDKGGNARMCFPAAATVVMAKSGARRRMEALRVGDVVRAR
SHGGGDLNSAVFALSHADGATHTTMSGSARAQALGDDNESLHAYIAATHQ
TLFAQFSALVFGDATVAKAAFRGALAVQGRAELSHFDIGADQTCDVTRPT
LLVRGALVARAGALHGGHAVVGARSRLHHSVQRTCSQRVEAYDAVHTAAH
LDFDAARRAVLRETAELCVAHSSGHVTLRNDTLLLTPRSRARSVSCYALF
HVRAADLRLARRWRLLSPRDDDDDQDDDDQDDDDQDDDDQQRWGGRSAFR
NVVLVVSGMRAELRDVRMRAFNARRTLLVFCAVYGTLDMYNVKLRASVLA
PTASLTAMDSVVNGSLVVGGLRGSLAALHAAYATC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026588Choice_anch_A