Gchil8609.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8609.t1
Unique Name	Gchil8609.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	515

Homology

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BLAST of Gchil8609.t1 vs. uniprot
Match: A0A2V3J3E9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3E9_9FLOR)

HSP 1 Score: 538 bits (1387), Expect = 1.410e-184
Identity = 274/514 (53.31%), Postives = 356/514 (69.26%), Query Frame = 0

Query:    2 TEKEPAAVVFPSSFVCVKYFCKDDPILHVQEG--DVDGVINREMLWHFCEGSCALQLSNGKAVVSKAGTEIRWELRHGDFLFRKTKSMRSFQIPGLEALG-LCAMFLFRFRTTRIFPALLSAMILFFWIRMQHFNTIPNYSLVVKKQNSVDAVNIGSFVLHNFSYSVVQRGDGRCAIYSCNHFKGVANIRFRTSCDVLNFRVPLVTRGGRPVKLNWLKVLTGIWLLEHHGYEHFVYIDRDLILDRDPGFIFGHQNVVFSDLGGLKPDSAMFIFRNANGVNHLSTLHSWLKRETGETSRRDDGEEQAALFTLSNNLTHVPGQKLYTFQCGRNSVNRAECLLRRRTPSLDANVFFSKLLLEILRPLSFDFIPHRFLAPTFLFRHIRQRALRELMPLMLPVLEIIIYQRWVAEAPVKELRCPPMSTKVISYGSFDNPYTQEFSGVSSFGVVSRTPKGWICTDIAQRQKAWNYPRLSAVESFAIAQALVLALSYLCGFKHFLDPAWNSKNLKRGKAKS 512
            TEK+  AV FP++F+CVKY C+D  I +VQEG  DV  V+NREMLW  C G C++ + +GKAVV+  G    WEL  G+FLF++TKS ++     L  L  LC++ L R R T +     S ++L  W+  +   T   Y+L V++        +  F LHNFS +  +RG  +C IY+CN FK V NIRFRT+CD++NFRVP V+R  R V+LNWLKVLTGIWLL++  YE  +YIDRDLILD+DP F F ++NV+FSDLGGLKPDSAMF+FR +  VNH STL+ WLK+ETGETSRRD GEEQAALF +  N  HV  Q LYTFQCGRNS+NRAECL R R+ S+DANV FSK+  E+LR + F F P+RF  P  L  + +   +    P++LPVLEII+YQ +VA+   +E+RCPP+S+K ISYGSFDNPYT+ F+  S+ G VSRTP GW CTD+++    W++PRLS VESFA+AQ L +AL          + + N++NLKR KAKS
Sbjct:   75 TEKKSVAVSFPNAFLCVKYICQDSLIENVQEGPGDVTTVVNREMLWSLCGGFCSVDVRHGKAVVTGHGKS--WELSQGNFLFQRTKSTKNNNWDYLPLLAALCSVPLMRRRGTPL--VFFSLVVLSVWLFTRSTKTDTRYALDVEEIGQGATTRVAGFALHNFSRAFERRGSSQCVIYTCNRFKKVRNIRFRTTCDIVNFRVPFVSRESRSVRLNWLKVLTGIWLLKNTKYEKLIYIDRDLILDKDPSFSFRNRNVIFSDLGGLKPDSAMFMFRGSQSVNHTSTLYEWLKKETGETSRRDGGEEQAALFDMQENSIHVSRQPLYTFQCGRNSMNRAECLRRHRSLSIDANVLFSKIAFEVLRLVIFPFFPYRFPKPETLLSNWKYGGISWTAPVLLPVLEIILYQHFVADPGPREVRCPPLSSKAISYGSFDNPYTKTFTSFSASGSVSRTPLGWRCTDLSRGGNDWDFPRLSVVESFAVAQFLAVALRLSLKAMRMPEKSGNARNLKRDKAKS 584

The following BLAST results are available for this feature:

BLAST of Gchil8609.t1 vs. uniprot

BLAST of Gchil8609.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3J3E9_9FLOR	1.410e-184	53.31	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 112..129
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..89
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 130..388
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 90..106
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 497..514
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 389..405
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 406..475
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 107..111
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 476..496
None	No IPR available	TMHMM	TMhelix		coord: 113..130

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:603624..605168 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8609.t1	Gchil8609.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000088_pilon 603624..605168 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8609.t1 ID=Gchil8609.t1|Name=Gchil8609.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=515bp
MTEKEPAAVVFPSSFVCVKYFCKDDPILHVQEGDVDGVINREMLWHFCEG
SCALQLSNGKAVVSKAGTEIRWELRHGDFLFRKTKSMRSFQIPGLEALGL
CAMFLFRFRTTRIFPALLSAMILFFWIRMQHFNTIPNYSLVVKKQNSVDA
VNIGSFVLHNFSYSVVQRGDGRCAIYSCNHFKGVANIRFRTSCDVLNFRV
PLVTRGGRPVKLNWLKVLTGIWLLEHHGYEHFVYIDRDLILDRDPGFIFG
HQNVVFSDLGGLKPDSAMFIFRNANGVNHLSTLHSWLKRETGETSRRDDG
EEQAALFTLSNNLTHVPGQKLYTFQCGRNSVNRAECLLRRRTPSLDANVF
FSKLLLEILRPLSFDFIPHRFLAPTFLFRHIRQRALRELMPLMLPVLEII
IYQRWVAEAPVKELRCPPMSTKVISYGSFDNPYTQEFSGVSSFGVVSRTP
KGWICTDIAQRQKAWNYPRLSAVESFAIAQALVLALSYLCGFKHFLDPAW
NSKNLKRGKAKSTS*