Gchil8668.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8668.t1
Unique NameGchil8668.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length210
Homology
BLAST of Gchil8668.t1 vs. uniprot
Match: A0A2V3IMX4_9FLOR (Ubiquitin-conjugating enzyme E2 5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMX4_9FLOR)

HSP 1 Score: 357 bits (917), Expect = 6.900e-124
Identity = 173/201 (86.07%), Postives = 181/201 (90.05%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFPTGDTANGDDDDDASNFSMSDXXXXXXXXXXXXXXXPLAPLSVADEKD 201
            MASPGKRRETDLMKLMMADYEIQMADGDRVGEF+VKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYV+KYAKPEDFPTGD A+G++DDDASNFSMS+                L+ L V DEK+
Sbjct:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFYVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVHKYAKPEDFPTGDGADGENDDDASNFSMSESEGEAADDILAGDEGALSALDVDDEKN 201          
BLAST of Gchil8668.t1 vs. uniprot
Match: R7QGH1_CHOCR (Ubiquitin-conjugating enzyme, E2 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QGH1_CHOCR)

HSP 1 Score: 320 bits (821), Expect = 2.360e-109
Identity = 151/174 (86.78%), Postives = 161/174 (92.53%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFPTGDTANGDDDDDASNFSMSD 174
            MASPGKRRETDLMKLMMAD+EIQMADGDRVGEF+VKFHGPK TPYEGGVWKVHVELP+ YPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQ+WSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREP+RYKQKV EYV +YAKPEDFP+G   +      AS+FSM+D
Sbjct:    1 MASPGKRRETDLMKLMMADHEIQMADGDRVGEFYVKFHGPKQTPYEGGVWKVHVELPETYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQTWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPDRYKQKVREYVQRYAKPEDFPSGSADDXXXXXXASSFSMTD 174          
BLAST of Gchil8668.t1 vs. uniprot
Match: A0A1X6P6P2_PORUM (UBC core domain-containing protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P6P2_PORUM)

HSP 1 Score: 294 bits (753), Expect = 1.140e-98
Identity = 134/159 (84.28%), Postives = 147/159 (92.45%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFPTGDTA 159
            MASPGKRRE DLMKLMMADY++QM DGD VG F+V+FHGPK TPYEGGVWKVHVELP+AYPYKSPSIGFINRL+HPNVDEMSGSVCLDVINQ+WSPMYDL NIF++FLPQLLTYPNPTDPLNGEAAALQ+REPERY+ KV + V KYAKPED+P G TA
Sbjct:    1 MASPGKRREMDLMKLMMADYDVQMCDGDNVGAFYVRFHGPKDTPYEGGVWKVHVELPEAYPYKSPSIGFINRLFHPNVDEMSGSVCLDVINQTWSPMYDLKNIFDIFLPQLLTYPNPTDPLNGEAAALQLREPERYEAKVKDMVAKYAKPEDYPQGSTA 159          
BLAST of Gchil8668.t1 vs. uniprot
Match: A0A5J4YJ08_PORPP (Ubiquitin-conjugating enzyme E2 5 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJ08_PORPP)

HSP 1 Score: 291 bits (745), Expect = 6.700e-98
Identity = 131/156 (83.97%), Postives = 145/156 (92.95%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFPTG 156
            MASPGKRRE DLMKLMMADY++ M D DRVGEF+VKFHGPK TPYEGG+WKVH ELPDAYPYKSPSIGF+NR+YHPNVDE+SGSVCLDVINQ+WSPMYDL NIFEVFLPQLLTYPNPTDPLNGEAAALQMREPE +K++  EYV +YA+PEDFP+G
Sbjct:    1 MASPGKRREMDLMKLMMADYDVVMCDEDRVGEFYVKFHGPKDTPYEGGLWKVHCELPDAYPYKSPSIGFVNRIYHPNVDEVSGSVCLDVINQTWSPMYDLINIFEVFLPQLLTYPNPTDPLNGEAAALQMREPEEFKKRCREYVQRYARPEDFPSG 156          
BLAST of Gchil8668.t1 vs. uniprot
Match: R7QF75_CHOCR (UBC core domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF75_CHOCR)

HSP 1 Score: 286 bits (732), Expect = 3.910e-92
Identity = 132/151 (87.42%), Postives = 142/151 (94.04%), Query Frame = 0
Query:   24 MADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFPTGDTANGDDDDDASNFSMSD 174
            MADGDRVG+F+VKFHGPK TPYEGGVWKVHVELP+ YPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQ+WSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREP+RYKQKV EYV +YAKPEDFP+G   + +DDDDAS FSM+D
Sbjct:    1 MADGDRVGKFYVKFHGPKQTPYEGGVWKVHVELPENYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQTWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPDRYKQKVREYVQRYAKPEDFPSGSADDKEDDDDASRFSMTD 151          
BLAST of Gchil8668.t1 vs. uniprot
Match: M2Y2Q8_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2Y2Q8_GALSU)

HSP 1 Score: 273 bits (699), Expect = 8.820e-91
Identity = 126/166 (75.90%), Postives = 144/166 (86.75%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFPTGDTANGDDDDD 166
            MASP KRRETDLMKLMMA+YE+++A+ DRVG+FFVKF GP  TPYEGGVWKVHV LP+AYPYKSPSIGF+NR+YHPNVDEMSGSVCLDVINQ+WSPM+DL NIFEVFLPQLLTYPNP+DPLNGEAAAL+MREPE+Y  KV +YV +YA P  F +      +DD D
Sbjct:    1 MASPSKRRETDLMKLMMAEYEVELAENDRVGDFFVKFCGPVDTPYEGGVWKVHVTLPEAYPYKSPSIGFVNRIYHPNVDEMSGSVCLDVINQTWSPMFDLVNIFEVFLPQLLTYPNPSDPLNGEAAALEMREPEKYVAKVKDYVQRYAHPSLFASSSKKELEDDSD 166          
BLAST of Gchil8668.t1 vs. uniprot
Match: M2W4S3_GALSU (Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W4S3_GALSU)

HSP 1 Score: 264 bits (675), Expect = 3.690e-87
Identity = 117/164 (71.34%), Postives = 142/164 (86.59%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFPTGDTANGDDD 164
            M+SP KRRE DLMKL+MADYE+++++ ++V +F+VKFHGP  T YEGGVWKVHV+LPDAYPYKSPSIGF+N++YHPNVDE SGSVCLDVINQ+WSPM+DL NIFEVFLPQLLTYPNPTDPLNGEAAALQ+++PE++  KV EYV K+A PE FP+    +   D
Sbjct:    1 MSSPSKRREMDLMKLLMADYELELSEENQVSDFYVKFHGPPETAYEGGVWKVHVQLPDAYPYKSPSIGFVNKIYHPNVDEASGSVCLDVINQTWSPMFDLVNIFEVFLPQLLTYPNPTDPLNGEAAALQLKDPEKFTSKVKEYVQKFALPEHFPSSKAEDSSSD 164          
BLAST of Gchil8668.t1 vs. uniprot
Match: A0A7J7IEX2_9RHOD (Ubiquitin-conjugating enzyme E2 8 n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IEX2_9RHOD)

HSP 1 Score: 265 bits (676), Expect = 9.960e-87
Identity = 116/154 (75.32%), Postives = 139/154 (90.26%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFP 154
            M+SPG+RRE D+MKL+MADYE++MA  D   EF+VKF GPK TPYEGGVWKVHVELP+AYPYKSPSIGF+N +YHPN+D+MSGSVCLDVINQ+WSPM+DL N+FEVFLPQLLTYPN  DPLNGEAAAL +REP+R++QKV E+VN+YA+ ED+P
Sbjct:    1 MSSPGRRREMDIMKLVMADYEVEMASEDSNAEFYVKFRGPKDTPYEGGVWKVHVELPEAYPYKSPSIGFVNAIYHPNIDQMSGSVCLDVINQTWSPMFDLLNVFEVFLPQLLTYPNSQDPLNGEAAALHLREPQRFQQKVREFVNRYARDEDYP 154          
BLAST of Gchil8668.t1 vs. uniprot
Match: M1VGP0_CYAM1 (Probable ubiquitin conjugating enzyme E2 n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VGP0_CYAM1)

HSP 1 Score: 264 bits (674), Expect = 2.140e-86
Identity = 115/154 (74.68%), Postives = 140/154 (90.91%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFP 154
            M+SPG+RRE D+MKL+MADYE++MA+ D   EF+VKF GPK TPYEGGVWKVHVELP+AYPYKSPSIGF+N +YHPN+D+MSGSVCLDVINQ+WSP++DL N+FEVFLPQLLTYPN  DPLNGEAAAL +REP+R++QKV E+VN+YA+ ED+P
Sbjct:    1 MSSPGRRREMDIMKLVMADYEVEMANEDSNAEFYVKFRGPKDTPYEGGVWKVHVELPEAYPYKSPSIGFVNAIYHPNIDQMSGSVCLDVINQTWSPLFDLLNVFEVFLPQLLTYPNSQDPLNGEAAALHLREPQRFQQKVREFVNRYAREEDYP 154          
BLAST of Gchil8668.t1 vs. uniprot
Match: A0A1Y1IJE8_KLENI (Ubiquitin-protein ligase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJE8_KLENI)

HSP 1 Score: 257 bits (657), Expect = 1.100e-84
Identity = 120/174 (68.97%), Postives = 142/174 (81.61%), Query Frame = 0
Query:    1 MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVWKVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDLTNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKPEDFPTGDTANGDDDDDASNFSMSD 174
            M+SP KRRE D+MKLMM+DY+++M + D + EFFV+F GPK +PYEGGVWK+HVELPDAYPYKSPSIGFINR++HPNVDE+SGSVCLDVINQ WSPM+DL N+FEVFLPQLL YPNPTDPLNGEAAAL MREP+ YK KV EY  ++AKPED         +D+ +     MSD
Sbjct:    1 MSSPSKRREMDVMKLMMSDYKVEMIN-DGMSEFFVEFLGPKESPYEGGVWKIHVELPDAYPYKSPSIGFINRIFHPNVDELSGSVCLDVINQRWSPMFDLINVFEVFLPQLLLYPNPTDPLNGEAAALLMREPDLYKSKVKEYCQRFAKPEDLGNKPEPESEDESEDDLSDMSD 173          
The following BLAST results are available for this feature:
BLAST of Gchil8668.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMX4_9FLOR6.900e-12486.07Ubiquitin-conjugating enzyme E2 5 n=1 Tax=Gracilar... [more]
R7QGH1_CHOCR2.360e-10986.78Ubiquitin-conjugating enzyme, E2 n=1 Tax=Chondrus ... [more]
A0A1X6P6P2_PORUM1.140e-9884.28UBC core domain-containing protein n=1 Tax=Porphyr... [more]
A0A5J4YJ08_PORPP6.700e-9883.97Ubiquitin-conjugating enzyme E2 5 n=1 Tax=Porphyri... [more]
R7QF75_CHOCR3.910e-9287.42UBC core domain-containing protein n=1 Tax=Chondru... [more]
M2Y2Q8_GALSU8.820e-9175.90Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
M2W4S3_GALSU3.690e-8771.34Ubiquitin-conjugating enzyme E2 n=1 Tax=Galdieria ... [more]
A0A7J7IEX2_9RHOD9.960e-8775.32Ubiquitin-conjugating enzyme E2 8 n=1 Tax=Cyanidio... [more]
M1VGP0_CYAM12.140e-8674.68Probable ubiquitin conjugating enzyme E2 n=1 Tax=C... [more]
A0A1Y1IJE8_KLENI1.100e-8468.97Ubiquitin-protein ligase n=1 Tax=Klebsormidium nit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00212ubc_7coord: 3..149
e-value: 1.2E-46
score: 170.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..171
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..209
NoneNo IPR availablePANTHERPTHR24068:SF321UBIQUITIN-CONJUGATING ENZYME E2-23 KDAcoord: 3..179
NoneNo IPR availablePANTHERPTHR24068UBIQUITIN-CONJUGATING ENZYME E2coord: 3..179
IPR000608Ubiquitin-conjugating enzyme E2PFAMPF00179UQ_concoord: 12..143
e-value: 4.1E-37
score: 126.9
IPR000608Ubiquitin-conjugating enzyme E2PROSITEPS50127UBC_2coord: 3..149
score: 38.9221
IPR000608Ubiquitin-conjugating enzyme E2CDDcd00195UBCccoord: 7..144
e-value: 8.60551E-47
score: 149.275
IPR016135Ubiquitin-conjugating enzyme/RWD-likeGENE3D3.10.110.10Ubiquitin Conjugating Enzymecoord: 2..156
e-value: 9.2E-47
score: 160.6
IPR016135Ubiquitin-conjugating enzyme/RWD-likeSUPERFAMILY54495UBC-likecoord: 6..149
IPR023313Ubiquitin-conjugating enzyme, active sitePROSITEPS00183UBC_1coord: 74..90

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:1106873..1107869 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8668.t1Gchil8668.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 1106873..1107869 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8668.t1 ID=Gchil8668.t1|Name=Gchil8668.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=210bp
MASPGKRRETDLMKLMMADYEIQMADGDRVGEFFVKFHGPKSTPYEGGVW
KVHVELPDAYPYKSPSIGFINRLYHPNVDEMSGSVCLDVINQSWSPMYDL
TNIFEVFLPQLLTYPNPTDPLNGEAAALQMREPERYKQKVIEYVNKYAKP
EDFPTGDTANGDDDDDASNFSMSDSDGEAADDILGDEDGPLAPLSVADEK
DLADGTAQR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000608UBQ-conjugat_E2
IPR016135UBQ-conjugating_enzyme/RWD
IPR023313UBQ-conjugating_AS