Gchil8556.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8556.t1
Unique NameGchil8556.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length155
Homology
BLAST of Gchil8556.t1 vs. uniprot
Match: A0A2V3IXM7_9FLOR (40S ribosomal protein S18 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IXM7_9FLOR)

HSP 1 Score: 291 bits (745), Expect = 1.810e-99
Identity = 147/154 (95.45%), Postives = 152/154 (98.70%), Query Frame = 0
Query:    1 MAVIMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKRA 154
            MAV+MEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSL+NEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKT+QLIANQLDFK+REDLDRLRK R HRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKK+A
Sbjct:    1 MAVVMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLSNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTTQLIANQLDFKLREDLDRLRKTRCHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKKA 154          
BLAST of Gchil8556.t1 vs. uniprot
Match: R7QA05_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QA05_CHOCR)

HSP 1 Score: 292 bits (748), Expect = 7.020e-99
Identity = 147/154 (95.45%), Postives = 153/154 (99.35%), Query Frame = 0
Query:    1 MAVIMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKRA 154
            MAV+MEGEEFQHILRVLNTNI+GRQKVMYALTSIKGVGRRFSNLVLKKAD+DL KRAGSL+NEEIDRIVTIIQ+PRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKK+A
Sbjct:   71 MAVVMEGEEFQHILRVLNTNIEGRQKVMYALTSIKGVGRRFSNLVLKKADVDLAKRAGSLSNEEIDRIVTIIQNPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKKA 224          
BLAST of Gchil8556.t1 vs. uniprot
Match: A0A1X6NL25_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NL25_PORUM)

HSP 1 Score: 259 bits (661), Expect = 1.200e-86
Identity = 127/153 (83.01%), Postives = 144/153 (94.12%), Query Frame = 0
Query:    1 MAVIMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKR 153
            MAV+M+  EFQHILR+LNTNI+GR K M+ALT+IKGVGRRFSNLVLKKAD+DL+KRAG L++EEIDRIVTIIQ+PRQFKIPD+FLNRQ+DFKDGK SQLIAN LDFK+REDLDR+RKIR HRG+RHY GLRVRGQHTKTTGRRGRTVGVSK+R
Sbjct:    1 MAVVMQSAEFQHILRILNTNIEGRHKTMFALTAIKGVGRRFSNLVLKKADVDLSKRAGMLSSEEIDRIVTIIQNPRQFKIPDWFLNRQKDFKDGKYSQLIANNLDFKLREDLDRMRKIRCHRGIRHYAGLRVRGQHTKTTGRRGRTVGVSKRR 153          
BLAST of Gchil8556.t1 vs. uniprot
Match: A0A7S1XJJ9_9RHOD (Hypothetical protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1XJJ9_9RHOD)

HSP 1 Score: 257 bits (657), Expect = 1.100e-85
Identity = 125/153 (81.70%), Postives = 146/153 (95.42%), Query Frame = 0
Query:    1 MAVIMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKR 153
            M+ +M+  EFQHILRVLNTNIDGRQKVM+A+TSIKGVGRRF+NLVLKKAD+DL+KRAG L+NEEIDRIVTIIQ+P+QFKIPD+FLNRQ++FKDGK +QLIAN LDF++REDLDRLRKIR+HRG+RHY GLRVRGQHTKTTGRRG+TVGVSKK+
Sbjct:   26 MSAVMDSGEFQHILRVLNTNIDGRQKVMFAITSIKGVGRRFANLVLKKADVDLSKRAGELSNEEIDRIVTIIQNPQQFKIPDWFLNRQKNFKDGKYTQLIANALDFQLREDLDRLRKIRAHRGIRHYMGLRVRGQHTKTTGRRGKTVGVSKKK 178          
BLAST of Gchil8556.t1 vs. uniprot
Match: M2W5T7_GALSU (40S ribosomal protein S18 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W5T7_GALSU)

HSP 1 Score: 253 bits (647), Expect = 1.580e-84
Identity = 123/153 (80.39%), Postives = 145/153 (94.77%), Query Frame = 0
Query:    1 MAVIMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKR 153
            M+V+++  EFQHILR+LNTNIDG++KVMYALTSIKGVGRRFSNLVLKKA++D++KRAG LT EEIDRIVTIIQ+PRQFKIPD+FLNRQ+D +DGK +QLI+N LDFK+REDLDRLRKIR+HRG+RH +GLRVRGQHTKTTGRRGRTVGVSKK+
Sbjct:    1 MSVLLQSSEFQHILRILNTNIDGKRKVMYALTSIKGVGRRFSNLVLKKAEVDVSKRAGDLTAEEIDRIVTIIQNPRQFKIPDWFLNRQKDVRDGKYTQLISNNLDFKLREDLDRLRKIRAHRGLRHMWGLRVRGQHTKTTGRRGRTVGVSKKK 153          
BLAST of Gchil8556.t1 vs. uniprot
Match: A0A7S2ZCH8_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S2ZCH8_9RHOD)

HSP 1 Score: 246 bits (628), Expect = 1.240e-81
Identity = 120/154 (77.92%), Postives = 142/154 (92.21%), Query Frame = 0
Query:    1 MAVIMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKRA 154
            M+VIM   EFQHILRV+NTNIDGR K+M+ALT+IKGVGRR+SNLVLKKAD+DL KRAG L+NEEIDRIV I+Q+P Q+KIP++FLNRQ+DFK+G  SQLI+NQLDFK+REDLDR+RKI+ HRG+RHY+GLRVRGQ TKTTGRRGRTVGVSKK+A
Sbjct:    1 MSVIMNQGEFQHILRVMNTNIDGRHKIMFALTAIKGVGRRYSNLVLKKADVDLNKRAGELSNEEIDRIVQIMQNPSQYKIPNWFLNRQKDFKEGTYSQLISNQLDFKLREDLDRMRKIKCHRGLRHYWGLRVRGQRTKTTGRRGRTVGVSKKKA 154          
BLAST of Gchil8556.t1 vs. uniprot
Match: E3PQX3_MICSQ (40S ribosomal protein S18 n=3 Tax=Ascidiacea TaxID=7713 RepID=E3PQX3_MICSQ)

HSP 1 Score: 239 bits (611), Expect = 4.530e-79
Identity = 113/153 (73.86%), Postives = 144/153 (94.12%), Query Frame = 0
Query:    1 MAVIMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKR 153
            MA+++  E+FQHILR+ NTNIDGR+K+MYA+T++KGVGRRFSNL+ KKAD+DLTKRAG LT++EIDR+VTI+Q+PRQ+KIPD+FLNRQ+D KDGK SQ+++NQLD K+RED +R++KIR+HRG+RHY+GLRVRGQHTKTTGRRGRTVGVSKK+
Sbjct:    1 MALVIP-EKFQHILRISNTNIDGRRKIMYAMTAVKGVGRRFSNLICKKADVDLTKRAGELTDDEIDRVVTIMQNPRQYKIPDWFLNRQKDVKDGKFSQVLSNQLDNKLREDTERMKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152          
BLAST of Gchil8556.t1 vs. uniprot
Match: A9P8I9_POPTR (Uncharacterized protein n=9 Tax=rosids TaxID=71275 RepID=A9P8I9_POPTR)

HSP 1 Score: 237 bits (605), Expect = 3.710e-78
Identity = 108/150 (72.00%), Postives = 140/150 (93.33%), Query Frame = 0
Query:    4 IMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKR 153
            ++  EEFQHILRVLNTN+DG+QK+M+ALTSIKG+GRRF+N+V KKAD+D+ KRAG L+ EE+D+++TI+ +PRQFKIPD+FLNRQ+D+KDGK SQ+++N LD K+R+DL+RL+KIR+HRG+RHY+GLRVRGQHTKTTGRRG+TVGVSKKR
Sbjct:    3 LVANEEFQHILRVLNTNVDGKQKIMFALTSIKGIGRRFANIVCKKADVDMNKRAGELSAEELDKLMTIVANPRQFKIPDWFLNRQKDYKDGKYSQVVSNALDMKLRDDLERLKKIRNHRGLRHYWGLRVRGQHTKTTGRRGKTVGVSKKR 152          
BLAST of Gchil8556.t1 vs. uniprot
Match: RS18_BRABE (40S ribosomal protein S18 n=3 Tax=Bilateria TaxID=33213 RepID=RS18_BRABE)

HSP 1 Score: 237 bits (605), Expect = 3.710e-78
Identity = 112/146 (76.71%), Postives = 140/146 (95.89%), Query Frame = 0
Query:    8 EEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKR 153
            E+FQHILRV+NTNIDGR+K+M+ALTSIKGVGRR+SN+V KKADIDL+KRAG L++EE++R++TI+Q+PRQ+KIPD+FLNRQ+D KDGK SQ++AN LD K+REDL+RL+KIR+HRG+RHY+GLRVRGQHTKTTGRRGRTVGVSKK+
Sbjct:    7 EKFQHILRVMNTNIDGRRKIMFALTSIKGVGRRYSNIVCKKADIDLSKRAGELSDEEVERLITIMQNPRQYKIPDWFLNRQKDVKDGKYSQVMANSLDNKLREDLERLKKIRAHRGLRHYWGLRVRGQHTKTTGRRGRTVGVSKKK 152          
BLAST of Gchil8556.t1 vs. uniprot
Match: T2MEP2_HYDVU (40S ribosomal protein S18 n=2 Tax=Hydroidolina TaxID=37516 RepID=T2MEP2_HYDVU)

HSP 1 Score: 237 bits (605), Expect = 4.110e-78
Identity = 111/146 (76.03%), Postives = 138/146 (94.52%), Query Frame = 0
Query:    8 EEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKADIDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLIANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVSKKR 153
            E+FQHILRV+NTNIDG+ K+MYA+TSIKGVGRRFSN+ LKKADIDL KRAG LT+EE++R++TI+Q+PRQ+KIPDYFLNRQ+D KDGK +Q++AN LD K+REDL+RL+KI++HRG+RHY+GLRVRGQHTKTTGR+GRTVGVSKK+
Sbjct:    7 EKFQHILRVMNTNIDGKTKIMYAMTSIKGVGRRFSNICLKKADIDLKKRAGELTDEEVERVITIMQNPRQYKIPDYFLNRQKDIKDGKYTQVLANALDNKLREDLERLKKIKAHRGLRHYWGLRVRGQHTKTTGRKGRTVGVSKKK 152          
The following BLAST results are available for this feature:
BLAST of Gchil8556.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IXM7_9FLOR1.810e-9995.4540S ribosomal protein S18 n=1 Tax=Gracilariopsis c... [more]
R7QA05_CHOCR7.020e-9995.45Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NL25_PORUM1.200e-8683.01Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1XJJ9_9RHOD1.100e-8581.70Hypothetical protein n=1 Tax=Erythrolobus australi... [more]
M2W5T7_GALSU1.580e-8480.3940S ribosomal protein S18 n=1 Tax=Galdieria sulphu... [more]
A0A7S2ZCH8_9RHOD1.240e-8177.92Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
E3PQX3_MICSQ4.530e-7973.8640S ribosomal protein S18 n=3 Tax=Ascidiacea TaxID... [more]
A9P8I9_POPTR3.710e-7872.00Uncharacterized protein n=9 Tax=rosids TaxID=71275... [more]
RS18_BRABE3.710e-7876.7140S ribosomal protein S18 n=3 Tax=Bilateria TaxID=... [more]
T2MEP2_HYDVU4.110e-7876.0340S ribosomal protein S18 n=2 Tax=Hydroidolina Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001892Ribosomal protein S13PFAMPF00416Ribosomal_S13coord: 15..143
e-value: 5.0E-52
score: 175.6
IPR001892Ribosomal protein S13PIRSFPIRSF002134RPS13p_RPS13a_RPS18e_RPS13ocoord: 5..154
e-value: 5.3E-39
score: 131.1
IPR001892Ribosomal protein S13HAMAPMF_01315Ribosomal_S13_S18coord: 13..153
score: 23.335098
IPR001892Ribosomal protein S13PROSITEPS50159RIBOSOMAL_S13_2coord: 16..146
score: 33.98941
NoneNo IPR availableGENE3D1.10.8.50coord: 1..81
e-value: 4.5E-35
score: 121.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 135..154
NoneNo IPR availablePANTHERPTHR10871:SF340S RIBOSOMAL PROTEIN S18-RELATEDcoord: 4..153
NoneNo IPR availablePANTHERPTHR1087130S RIBOSOMAL PROTEIN S13/40S RIBOSOMAL PROTEIN S18coord: 4..153
IPR02743730s ribosomal protein S13, C-terminalGENE3D4.10.910.1030s ribosomal protein s13, domain 2coord: 93..144
e-value: 8.6E-26
score: 91.5
IPR018269Ribosomal protein S13, conserved sitePROSITEPS00646RIBOSOMAL_S13_1coord: 122..135
IPR010979Ribosomal protein S13-like, H2THSUPERFAMILY46946S13-like H2TH domaincoord: 14..153

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:278679..279143 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8556.t1Gchil8556.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 278679..279143 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8556.t1 ID=Gchil8556.t1|Name=Gchil8556.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=155bp
MAVIMEGEEFQHILRVLNTNIDGRQKVMYALTSIKGVGRRFSNLVLKKAD
IDLTKRAGSLTNEEIDRIVTIIQSPRQFKIPDYFLNRQRDFKDGKTSQLI
ANQLDFKMREDLDRLRKIRSHRGMRHYFGLRVRGQHTKTTGRRGRTVGVS
KKRA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001892Ribosomal_S13
IPR02743730s_Rbsml_prot_S13_C
IPR018269Ribosomal_S13_CS
IPR010979Ribosomal_S13-like_H2TH