Gchil8580.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8580.t1
Unique NameGchil8580.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length283
Homology
BLAST of Gchil8580.t1 vs. uniprot
Match: A0A2V3ICD1_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ICD1_9FLOR)

HSP 1 Score: 124 bits (310), Expect = 5.230e-30
Identity = 111/279 (39.78%), Postives = 150/279 (53.76%), Query Frame = 0
Query:   11 GSNRQADSVPPAPPRSRSSILEGRNDSGIDPDTRRAPSVVSGPREVLAVGPAPVVETPSAAPRSRADP-ELQRLETRIDIANAAHVELLQEVTTLRRKVEDAQVRGVADDLRTLRRDVNSFLESFGTPGVFIQEYRSLVEEHRVQAERFRSRLDTLEAIIRMDGDAEASKDKPDVSED--EEHRSAKRDRRNSKKKVHLQEDLSDSDPN----RSPSSSFSESSDSEDERRSSRATRSKATYTSQGAIRTRKKGRKHLGLRELKPTNPLYRKLLSYRYY 282
            GS     S+PP P   R ++    ND  + P +R   SV   P    A GPA      + A  SR+D   L+ LE ++ I  ++ V L+Q++T LR + +DA VR V++D+R LR DVN+ +E     G  +QE          +  R  +RL+T+E  I  D     +     VSE   + HR+  R RR   KKV ++E LS S  +    RS  S         + R  SRA+RSK T  + GA+RTR+KGRKHLGL+ELKPTN LYRKLLSYRYY
Sbjct:   23 GSTGLPQSLPPLP---RDALTMPGNDDPV-PASRGPRSVNEVPE---AQGPADPAMAAAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVSGTLLQEVAE-------RLNRLAARLETVEQTIIHDAVPPGAP----VSEGSRKSHRATDRHRR---KKVKMEEGLSSSSSSESDVRSHGSXXXXXXXXXNHR--SRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRKLLSYRYY 278          
BLAST of Gchil8580.t1 vs. uniprot
Match: A0A2V3IMI9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMI9_9FLOR)

HSP 1 Score: 125 bits (314), Expect = 8.630e-29
Identity = 110/277 (39.71%), Postives = 148/277 (53.43%), Query Frame = 0
Query:   11 GSNRQADSVPPAPPRSRSSILEGRNDSGIDPDTRRAPSVVSGPREVLAVGPAPVVETPSAAPRSRADP-ELQRLETRIDIANAAHVELLQEVTTLRRKVEDAQVRGVADDLRTLRRDVNSFLESFGTPGVFIQEYRSLVEEHRVQAERFRSRLDTLEAIIRMDGDAEASKDKPDVSEDEE--HRSAKRDRRNSKKKVHLQEDLSDSDPNRSP--SSSFSESSDSEDERRSSRATRSKATYTSQGAIRTRKKGRKHLGLRELKPTNPLYRKLLSYRYY 282
            GS     S+PP P   R ++    ND  + P +R   SV   P    A GPA      + A  SR+D   L+ LE ++ I  ++ V L+Q++T LR + +DA VR V++D+R LR DVN+ +E     G  +QE          +  R   RL+T+E  I  D     +     VSE     HR+    RR   KKV ++EDLS S  + S   S  FS      +    SRA+RSK T  + GA+RTR+KGRKHLGL+ELKPTN LYR+LLSYRYY
Sbjct:   23 GSTGLPQSLPPLP---RDALTMPGNDDPV-PASRGPRSVNEVPE---AQGPADPALAVAQAMSSRSDEFTLRELEAQVRILQSSQVNLIQDITKLRTRFDDADVRDVSNDVRVLRADVNTVMEGRKVLGTLLQEVAE-------RLNRLADRLETVEQTIIHDAVPPGAP----VSEGSRKWHRAMDCHRR---KKVKMEEDLSSSSSSESDVRSHGFSXXXXXXEPNHRSRASRSKYTEATHGAVRTREKGRKHLGLKELKPTNLLYRRLLSYRYY 278          
The following BLAST results are available for this feature:
BLAST of Gchil8580.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ICD1_9FLOR5.230e-3039.78Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
A0A2V3IMI9_9FLOR8.630e-2939.71Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 141..168
NoneNo IPR availableCOILSCoilCoilcoord: 80..114
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..78
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..261
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..195

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:437526..438374 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8580.t1Gchil8580.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 437526..438374 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8580.t1 ID=Gchil8580.t1|Name=Gchil8580.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=283bp
MSPPTRGSRTGSNRQADSVPPAPPRSRSSILEGRNDSGIDPDTRRAPSVV
SGPREVLAVGPAPVVETPSAAPRSRADPELQRLETRIDIANAAHVELLQE
VTTLRRKVEDAQVRGVADDLRTLRRDVNSFLESFGTPGVFIQEYRSLVEE
HRVQAERFRSRLDTLEAIIRMDGDAEASKDKPDVSEDEEHRSAKRDRRNS
KKKVHLQEDLSDSDPNRSPSSSFSESSDSEDERRSSRATRSKATYTSQGA
IRTRKKGRKHLGLRELKPTNPLYRKLLSYRYY*
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