Gchil8647.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil8647.t1
Unique Name	Gchil8647.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	382

Homology

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BLAST of Gchil8647.t1 vs. uniprot
Match: A0A2V3IDK2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDK2_9FLOR)

HSP 1 Score: 376 bits (966), Expect = 5.290e-126
Identity = 196/372 (52.69%), Postives = 262/372 (70.43%), Query Frame = 0

Query:   10 KDDASLSSDSSGLTLEPLPDHLRFHPSDADNSTEERNFVEANPAQEPHTTSHSSQLPATGLTLPISNVGKRNAAVLETPPKRVEHCKESYSIPQTNSEVKSQPSSNNESVEELTSPQIYRMAMNRVTYNHIGFSYRFGCQDYAQNLQEAYKAYSEAASMGSRDALVYLAIAHIHGIAVEKSLAKAHSSLRRAILQGSADAVEMKALCSLAGTFENKRDQDKFLYLIELGTQMNAPGCLIWIGFCFEIGIGVQPDHHTAKMAYLAVKDSVSLNYLVQASYPGALTAGDPWLLLKCALFLLHSVGSPSVLGYAMDYLKQAAVLDCKEAQVYLAICLNDGKWLQRNTELALFWYREAAKGNCPQPIATRLVAELD 381
            KDDASLSS+SSGL+L  LP+ + F+ SD D S+++    + +  +  H   H+ +   + LT PI    K    +L+   ++ +  +     P+++ E K +   +++ +++L SPQIYRMAMNRV+ + +GF++RFGCQ  +Q+L +AY  Y +AA  G  DAL YLA AHIHG+ V+KSL  AH  LRR ILQGSADAVE++ALC + GTF+  RD D FL L+ELG  MNAP CL+W G CFE+G+GVQ D HTAK AYLA   S S+ YLVQ  +PG LTAGDPWLLLKC LFLLH +G    LG+AMD LKQ+A+L CKEAQVYL ICL++GKWLQR+TE+AL+W++EAAKG    PIA ++V +L+
Sbjct:   10 KDDASLSSNSSGLSLASLPEFIHFN-SDLDESSQD--MSQHSYTENEHNFLHTGKPDVSQLTKPIPTT-KVELELLDDQQEKPDREETLTLRPKSDEEPKEK---SDDLIKQLRSPQIYRMAMNRVSLSDLGFNHRFGCQSVSQDLTKAYNFYLDAADTGCTDALAYLATAHIHGLGVDKSLGTAHHLLRRGILQGSADAVEIRALCWMNGTFDGIRDYDTFLQLLELGIAMNAPSCLLWAGLCFELGLGVQTDSHTAKQAYLAAASSNSMTYLVQNCFPGVLTAGDPWLLLKCTLFLLHGIGHSENLGHAMDCLKQSALLGCKEAQVYLGICLSEGKWLQRDTEVALYWFQEAAKGELAHPIAKKVVEQLE 374

The following BLAST results are available for this feature:

BLAST of Gchil8647.t1 vs. uniprot

BLAST of Gchil8647.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IDK2_9FLOR	5.290e-126	52.69	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006597	Sel1-like repeat	SMART	SM00671	sel1	coord: 171..206 e-value: 0.68 score: 19.0 coord: 134..170 e-value: 38.0 score: 8.6 coord: 333..368 e-value: 8.0E-4 score: 28.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 287..380 e-value: 8.7E-11 score: 44.0
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 126..286 e-value: 8.3E-18 score: 66.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 98..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..73
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 30..44
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..121
None	No IPR available	PANTHER	PTHR43628	ACTIVATOR OF C KINASE PROTEIN 1-RELATED	coord: 137..271
None	No IPR available	PANTHER	PTHR43628:SF9	SEL1-REPEAT-CONTAINING PROTEIN YBEQ	coord: 137..271
None	No IPR available	SUPERFAMILY	81901	HCP-like	coord: 152..369

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000088_pilon	contig	tig00000088_pilon:879147..880292 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil8647.t1	Gchil8647.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000088_pilon 879147..880292 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil8647.t1 ID=Gchil8647.t1|Name=Gchil8647.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=382bp
MTPIEKGSVKDDASLSSDSSGLTLEPLPDHLRFHPSDADNSTEERNFVEA
NPAQEPHTTSHSSQLPATGLTLPISNVGKRNAAVLETPPKRVEHCKESYS
IPQTNSEVKSQPSSNNESVEELTSPQIYRMAMNRVTYNHIGFSYRFGCQD
YAQNLQEAYKAYSEAASMGSRDALVYLAIAHIHGIAVEKSLAKAHSSLRR
AILQGSADAVEMKALCSLAGTFENKRDQDKFLYLIELGTQMNAPGCLIWI
GFCFEIGIGVQPDHHTAKMAYLAVKDSVSLNYLVQASYPGALTAGDPWLL
LKCALFLLHSVGSPSVLGYAMDYLKQAAVLDCKEAQVYLAICLNDGKWLQ
RNTELALFWYREAAKGNCPQPIATRLVAELD*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006597	Sel1-like
IPR011990	TPR-like_helical_dom_sf