Gchil8571.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8571.t1
Unique NameGchil8571.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length865
Homology
BLAST of Gchil8571.t1 vs. uniprot
Match: A0A2V3INF6_9FLOR (Sec5 domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INF6_9FLOR)

HSP 1 Score: 171 bits (434), Expect = 1.650e-40
Identity = 120/307 (39.09%), Postives = 170/307 (55.37%), Query Frame = 0
Query:  563 VGVADDSXXXXXDERDPFRA-----LCRACALAPQRLAAAVEVAATPHFTRHPTVALSLAACVAELQHDTLRAVRLALISTPAPSPYPARAARRWLRTSAISLSATRERALRAFVALQGAPQRALAHSLVRGARIKTCVAHRHEDDAVRCGGAFRVAHVSDGARALVLALALVVVRAVPRARARATRPEMCVGVVTRLLADVGDTLVRALGVHKLAYRQAAQLWVDLSYVQTVVTAGADAELPALHHALDPLCIVKERAVQAVLADGFSFSLADMNALRELVVLPELARCTLLCQCFEETWRSVALR 864
            V + D       D   P +      L R CA AP      VE   +  +  + + AL +A C  E+  + L A+      T   SPY +RA +R L+  +  ++  ++RAL+A+V L   P + +A +LV+  + K        DD+V      ++  VS  AR LVL LALV++  V R     + PE+  G++ +L++ +G TL+  LG  KLAY +AAQLWVD+ Y+Q +VT GA+A+   L  +LD    VKERAVQAVLADGFSFSLADM  LRE VV  EL +  ++C+CF ETW  V  R
Sbjct:  537 VTITDQISDSDDDHESPTKGPSVDCLSRTCAEAPLVFVKTVENMMSD-YKENESAALQVAVCCTEMVANVLSAIEE---KTGLSSPYDSRATQRQLQQVSRQIAEIKDRALKAYVVLVFEPFQRMAGALVKFPKNKL-------DDSVSRTVPIKIVGVSKAARELVLRLALVMITTVKRT----SHPELLSGIMMKLISGIGQTLIGTLGTDKLAYNRAAQLWVDVMYMQAMVTKGANADTSGLQASLDGFSKVKERAVQAVLADGFSFSLADMKTLREQVVESELQQAPMICECFMETWSLVVSR 828          
BLAST of Gchil8571.t1 vs. uniprot
Match: R7QQ33_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQ33_CHOCR)

HSP 1 Score: 115 bits (287), Expect = 9.770e-23
Identity = 76/197 (38.58%), Postives = 107/197 (54.31%), Query Frame = 0
Query:  665 ERALRAFVALQGAPQRALAHSLVRGARIKTCVAHRHEDDAVRCGGAFRVAHVSDGARALVLALALVVVRAVPRARARATRPEMCVGVVTRLLADVGDTLVRALGVHKLAYRQAAQLWVDLSYVQTVVTAGADAELPALHHALDPLCIVKERAVQAVLADGFSFSLADMNALRELVVLPELARCTLLCQCFEETWRSV 861
            ER+   +V L  AP  ALA +LV              +D+       ++  +S  A  + L LAL+ +      R  +    +   ++  L+  VG TLV  L   KL Y +AAQLWVD++Y+Q ++T GAD++ P L  ALD    VKERAVQAVLADG+SFS+ADM+ LR  VV   +    ++  CF ETW S+
Sbjct:  462 ERSTDTYVRLVSAPLEALAANLV-------AFPEEELEDSFSRAVPIKIEGISKSACEVTLQLALITITT----RKSSGNTRLLREILLSLIQAVGQTLVDVLSTDKLIYHRAAQLWVDVTYIQDMITRGADSDTPGLQEALDGYSRVKERAVQAVLADGYSFSIADMSVLRSSVVAIGMELAQMVQDCFRETWLSL 647          
The following BLAST results are available for this feature:
BLAST of Gchil8571.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3INF6_9FLOR1.650e-4039.09Sec5 domain-containing protein n=1 Tax=Gracilariop... [more]
R7QQ33_CHOCR9.770e-2338.58Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 335..372
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 40..83
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 336..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 552..575
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 343..366
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 540..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 58..76
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 395..413
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 498..516
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 517..864
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..394
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 414..497

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:349978..352572 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8571.t1Gchil8571.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 349978..352572 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8571.t1 ID=Gchil8571.t1|Name=Gchil8571.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=865bp
MAPAPPPFEPSTWAEVCEAAANERAAARRPPPFVARVHAFTSASQRAHAQ
HHALMLADAPPPPSPPSPPPPPPWRAAAAAAAGEETGAGAGALDVSSAAF
CSAHYLARVHARAPLAELRAARVALRQSALKLDEARARARQRVYIQCALA
HAQLRAAATRDKDAATTRCATRVAASTAAVEAARLHARYAALDAREATLA
RLRGARRVVRASHWLFDATRALRAALSARHNKDDDDYGDLDALRRALQTG
ARAREWLLAQPLPRVGEGVLQALGEVADAVEERVGDGGADDDDDDERHDA
LLRALLAAGRARCVQRVVMRRAAAAGRDLDDALRAAEARTQGEVVEEEEE
EEEEEEEEEEEEEEEVVEQGARALLAALRRVWAVGRLRVTRQQCAALVTA
QLAELCASYAAALQRRQLLRRRHAALSTRAVRSVWRARHVALHSLCVPYA
AVAPLGLLGAALRAALVRSLAAAVRAAAPPLAVEAARRRRAAPRAARLLR
AVVVEALAQAAAVAALSPPPPPPPPPVSAAAPAAVCVLQHADDHHDLHDD
DDDHDDHDDGDGVGVADDSDADEDDERDPFRALCRACALAPQRLAAAVEV
AATPHFTRHPTVALSLAACVAELQHDTLRAVRLALISTPAPSPYPARAAR
RWLRTSAISLSATRERALRAFVALQGAPQRALAHSLVRGARIKTCVAHRH
EDDAVRCGGAFRVAHVSDGARALVLALALVVVRAVPRARARATRPEMCVG
VVTRLLADVGDTLVRALGVHKLAYRQAAQLWVDLSYVQTVVTAGADAELP
ALHHALDPLCIVKERAVQAVLADGFSFSLADMNALRELVVLPELARCTLL
CQCFEETWRSVALR*
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