Gchil8638.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8638.t1
Unique NameGchil8638.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length318
Homology
BLAST of Gchil8638.t1 vs. uniprot
Match: A0A2V3IMV5_9FLOR (Protein LAS1 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMV5_9FLOR)

HSP 1 Score: 287 bits (735), Expect = 1.560e-92
Identity = 165/323 (51.08%), Postives = 203/323 (62.85%), Query Frame = 0
Query:    1 MLTAGKIEQAKARIALYQVRRRGSVPISVLSSVALACQLKNPSPDPYTQRLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQHTNLINRLPKSLLDLKVVFESRPGHTHENVGFDYASFLSTNLCSEDDEVDTTVYKINTIIRKLQSRGAQYVRQLPIYKNSP--SRKRWRRCKNPEAWKRLSLGLIPGQTRPPRLKEIKIYSGSLSIEGDDVNDTPHKYGASSKQFDG------LPMV-AISEESARKRNRIPTAGEVEKIETLTNHFTSLVAA 314
            MLTAG +EQA AR+ALYQ+RRR SVPISVL+SV LA QLKNPSPD +TQRLSLSM ITR VNGLTDR QPR QGA+ARSV+ LAV LGLPL LVDIRHQSCHNLLPRLTALESGAKQAL WLEQ YW+PQH ++  +LP+   +LK V ES      E  G  + +    +  S +D     + K+     +L+ +  +   +  I    P    KRWRRC N EAWK + LGLIPGQ RPPRLK  K  SG  +        T    G S  Q +G      +P + ++ E+  +   R  T  + E++    NHF  L++A
Sbjct:   25 MLTAGDVEQASARVALYQIRRRSSVPISVLTSVTLARQLKNPSPDTFTQRLSLSMAITRFVNGLTDRFQPRGQGASARSVHTLAVGLGLPLILVDIRHQSCHNLLPRLTALESGAKQALVWLEQHYWEPQHRSIALQLPEEYRELKEVIESDASLDVEKAGLWFQTASERSSDSANDSTAILLSKMKEAAERLEEKQRKATTEPRIISKRPRPGTKRWRRCTNSEAWKTVPLGLIPGQERPPRLKVHKPNSGFRA-------HTTKTTGTSLVQENGELETPDMPAIESMGEKPVQSHVRRLTEEDDERVTHFVNHFRGLISA 340          
BLAST of Gchil8638.t1 vs. uniprot
Match: R7QAV5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QAV5_CHOCR)

HSP 1 Score: 201 bits (510), Expect = 1.750e-58
Identity = 115/303 (37.95%), Postives = 173/303 (57.10%), Query Frame = 0
Query:    1 MLTAGKIEQAKARIALYQVRRRGSVPISVLSSVALACQLKNPSPDPYTQRLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQHTNLINRLPKSLLDLKVVFESRPGHTH----ENVGFDYASFLSTNLCSEDDEVDTTVYKINTIIRKLQSRGAQYVRQLPIYKNSPSRKRWRRCKNPEAWKRLSLGLIPGQTRPPRLKEIKIYS---------GSLSIEGDDVNDT-PHKYGASSKQFDGLPMVAISEESARKR 289
            M+ +G  E+A  R+ALY++RRR +VPI + S++ L  QL+NP PDPY QRL+LSMT+ RLVNG TD++QPR + + ARSVY LAV+L LPL LV+IRHQ+ HN LPRL+ L+  A++AL WLE+ YW+PQ   + + L  +   ++ VF +     +    +N   + AS   T    E     + + ++  +  KL+       + +P    +  R RW  C N EAW+   LGL+PGQTR   L  ++            G + +E ++ ++  P    A+ ++ DG    A   + ARKR
Sbjct:   21 MIHSGTTERAAKRVALYRLRRRDAVPIRMASTITLMRQLENPDPDPYLQRLALSMTLIRLVNGTTDQLQPRGERSIARSVYSLAVDLKLPLILVEIRHQASHNALPRLSVLKKAAEKALVWLEENYWEPQRKGISSALEGTATGIRKVFGAATDDMNYEILKNGPEEIASTAVTEGGYETPIHHSVLDRMRELSEKLECNAGNKKKTVPTQHRTTDRPRWALCNNHEAWRITPLGLVPGQTRFTHLVSVETRPQNSMEQESRGFIEMEQNETDENHPRIASATIRKRDGCESEADRPQKARKR 323          
BLAST of Gchil8638.t1 vs. uniprot
Match: A0A7S2Z3E6_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z3E6_9CHLO)

HSP 1 Score: 96.3 bits (238), Expect = 2.530e-19
Identity = 56/134 (41.79%), Postives = 76/134 (56.72%), Query Frame = 0
Query:   20 RRRGSVPISVLSSVALACQLKNPSPDPYTQRLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQHTNL------INRLPKSLLDLKV 147
            R RG VP++V ++  L        P  Y QRL+LSM + RLVNG++  +Q   +G  A+SV  LA  +GLP  LVD+RH++ H+ LP L  L   A QAL WL   YW+PQ   L      +  + K LLDL +
Sbjct:    1 RARGRVPLAVDATAELVQIRLQAHPSVYMQRLTLSMALVRLVNGISGALQ---KGVYAKSVASLASSVGLPRVLVDVRHEATHSGLPSLALLSVAADQALDWLRANYWRPQANQLRQQDARVAAILKELLDLSL 131          
BLAST of Gchil8638.t1 vs. uniprot
Match: A0A7S3D9J9_9EUKA (Hypothetical protein n=1 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3D9J9_9EUKA)

HSP 1 Score: 90.5 bits (223), Expect = 1.300e-16
Identity = 55/123 (44.72%), Postives = 72/123 (58.54%), Query Frame = 0
Query:   15 ALYQV---RRRGSVPISVLSSVALA---CQLKNPSPDPYTQRLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQH 131
            AL+Q+    RRG VP+SV  + AL      L+    + +  RLSLSM I RLVNG+T+   P  QG  + SV GLA ++GLP  LVD+RH + H  LP L  LE    +AL W+ + YW  QH
Sbjct:    3 ALHQISVWERRGHVPLSVEVTGALLRTRSSLRRGETNEFEARLSLSMAILRLVNGVTE---PMQQGRHSLSVAGLAGKIGLPRLLVDVRHDATHQTLPSLQMLELATDRALEWMWESYWCAQH 122          
BLAST of Gchil8638.t1 vs. uniprot
Match: A0A5B8MU70_9CHLO (Ribosomal biogenesis protein LAS1 n=2 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MU70_9CHLO)

HSP 1 Score: 89.0 bits (219), Expect = 4.350e-16
Identity = 49/114 (42.98%), Postives = 74/114 (64.91%), Query Frame = 0
Query:   20 RRRGSVPISV-LSSVALACQLKNPSPD--PYTQRLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQ 130
            R RG VP++V +++  +  +L++   D   +  RL+LSMT+TRLVNG++  +Q   +G  A+SV  LA  +GLP  LVD+RH++ HN LP ++ L   A+QAL WL   YW+ Q
Sbjct:   75 RARGRVPMAVGVTADIVQIKLRSCGGDHSSHVNRLALSMTLTRLVNGVSGELQ---KGVYAKSVANLAESVGLPRILVDLRHEATHNALPSMSVLSIAAEQALVWLRDNYWRRQ 185          
BLAST of Gchil8638.t1 vs. uniprot
Match: A0A0H5RDE0_9EUKA (Uncharacterized protein (Fragment) n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RDE0_9EUKA)

HSP 1 Score: 82.4 bits (202), Expect = 7.120e-14
Identity = 47/112 (41.96%), Postives = 67/112 (59.82%), Query Frame = 0
Query:   20 RRRGSVPISVLSSVALACQLKNPSP-DPYTQRLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQ 130
            RRRGSVPISV  + +L   L N        QRL++SM ITRLVNG+ D++Q       ARS+  +A ++ +P+  V++RH + HN LP L  L     +AL W+ + YWK +
Sbjct:   49 RRRGSVPISVDITGSLLESLVNEKRLSSNQQRLAISMAITRLVNGIADKLQT---SLFARSIRDIARDIDMPVVFVEVRHLATHNDLPSLPLLIETRSRALSWIRERYWKAE 157          
BLAST of Gchil8638.t1 vs. uniprot
Match: T0R2P0_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0R2P0_SAPDV)

HSP 1 Score: 80.1 bits (196), Expect = 4.520e-13
Identity = 51/139 (36.69%), Postives = 74/139 (53.24%), Query Frame = 0
Query:   12 ARIALYQVRRRGSVPISVLSSVA-LACQ-----LKNPSPDPYTQ----RLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQHTNLINRLPK 140
            ARIA ++ R    + I V + +A ++C      L  P    Y      RL  + TI R VNGL D  Q   +GA A  V  LA+ +G+PL +VDIRH+S H  LP L  L+  A+    WL + YW+PQ  + ++R+ +
Sbjct:   66 ARIAAWRARSDVPIAIEVTAQLAEISCHDGAYGLATPGRSMYRSYEELRLLYAATILRCVNGLVDASQ---KGAYAMPVSTLAMRIGIPLWVVDIRHESAHTKLPALPTLQLAAQTLWKWLFEHYWQPQEASFLDRVAR 201          
BLAST of Gchil8638.t1 vs. uniprot
Match: A0A1Y3NBS5_PIRSE (Uncharacterized protein n=2 Tax=Piromyces TaxID=4821 RepID=A0A1Y3NBS5_PIRSE)

HSP 1 Score: 79.0 bits (193), Expect = 6.570e-13
Identity = 43/87 (49.43%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   50 RLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQHTNLIN 136
            RL  +MT  R VNG+ D +Q   +GA A S+  LA +LGLP   VD+RH+  H+ LP L  L +G KQAL WL  FYW  Q  N IN
Sbjct:   95 RLLYTMTFIRFVNGIIDPLQ---KGAYAVSISSLAEQLGLPQWFVDLRHEGTHDQLPSLKVLRNGCKQALDWLNNFYWMKQK-NFIN 177          
BLAST of Gchil8638.t1 vs. uniprot
Match: A0A1Y1X7H1_9FUNG (Las1-domain-containing protein (Fragment) n=1 Tax=Anaeromyces robustus TaxID=1754192 RepID=A0A1Y1X7H1_9FUNG)

HSP 1 Score: 78.6 bits (192), Expect = 1.600e-12
Identity = 42/87 (48.28%), Postives = 53/87 (60.92%), Query Frame = 0
Query:   50 RLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQHTNLIN 136
            RL  +MT  R VNG+ D +Q   +GA A S+  LA +LGLP   VD+RH+  H+ LP L  L +G KQAL WL  FYW  Q  N +N
Sbjct:   95 RLLYTMTFIRFVNGIIDPLQ---KGAYAVSISSLAEQLGLPQWFVDLRHEGTHDQLPSLKVLRNGCKQALDWLNNFYWMKQK-NFVN 177          
BLAST of Gchil8638.t1 vs. uniprot
Match: A0A1V9ZWT0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZWT0_9STRA)

HSP 1 Score: 78.2 bits (191), Expect = 1.990e-12
Identity = 52/144 (36.11%), Postives = 76/144 (52.78%), Query Frame = 0
Query:    9 QAKARIALYQVRRRGSVPISVLSSVALA---CQ-----LKNPSPDPYTQ----RLSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQSCHNLLPRLTALESGAKQALFWLEQFYWKPQHTNLINRLPK 140
            +A ARIA ++ R    VP+++ ++  LA   C      L  P    Y      RL  S  I R VNGL D  Q   +GA A ++  LA+ +G+PL +VDIRH++ H  LP L  L+  A+    WL + YW+PQ T +  R+ +
Sbjct:   64 RALARIAAWKAR--SDVPVAIEATAHLAEISCHDQAFGLATPGRSMYRSHEELRLLYSAAILRCVNGLVDASQ---KGAYAMAISTLAMRIGIPLWVVDIRHEAAHTKLPALATLQLAAQTLWQWLFEHYWQPQETAINQRVER 202          
The following BLAST results are available for this feature:
BLAST of Gchil8638.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMV5_9FLOR1.560e-9251.08Protein LAS1 n=1 Tax=Gracilariopsis chorda TaxID=4... [more]
R7QAV5_CHOCR1.750e-5837.95Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S2Z3E6_9CHLO2.530e-1941.79Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A7S3D9J9_9EUKA1.300e-1644.72Hypothetical protein n=1 Tax=Palpitomonas bilix Ta... [more]
A0A5B8MU70_9CHLO4.350e-1642.98Ribosomal biogenesis protein LAS1 n=2 Tax=Chloropi... [more]
A0A0H5RDE0_9EUKA7.120e-1441.96Uncharacterized protein (Fragment) n=1 Tax=Spongos... [more]
T0R2P0_SAPDV4.520e-1336.69Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
A0A1Y3NBS5_PIRSE6.570e-1349.43Uncharacterized protein n=2 Tax=Piromyces TaxID=48... [more]
A0A1Y1X7H1_9FUNG1.600e-1248.28Las1-domain-containing protein (Fragment) n=1 Tax=... [more]
A0A1V9ZWT0_9STRA1.990e-1236.11Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007174Las1PFAMPF04031Las1coord: 6..128
e-value: 1.7E-26
score: 93.1
IPR007174Las1PANTHERPTHR15002UNCHARACTERIZEDcoord: 7..133

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:859424..860377 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8638.t1Gchil8638.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 859424..860377 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8638.t1 ID=Gchil8638.t1|Name=Gchil8638.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=318bp
MLTAGKIEQAKARIALYQVRRRGSVPISVLSSVALACQLKNPSPDPYTQR
LSLSMTITRLVNGLTDRIQPRAQGATARSVYGLAVELGLPLTLVDIRHQS
CHNLLPRLTALESGAKQALFWLEQFYWKPQHTNLINRLPKSLLDLKVVFE
SRPGHTHENVGFDYASFLSTNLCSEDDEVDTTVYKINTIIRKLQSRGAQY
VRQLPIYKNSPSRKRWRRCKNPEAWKRLSLGLIPGQTRPPRLKEIKIYSG
SLSIEGDDVNDTPHKYGASSKQFDGLPMVAISEESARKRNRIPTAGEVEK
IETLTNHFTSLVAAQDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007174Las1