Gchil8645.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8645.t1
Unique NameGchil8645.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length762
Homology
BLAST of Gchil8645.t1 vs. uniprot
Match: A0A2V3IDM5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IDM5_9FLOR)

HSP 1 Score: 567 bits (1462), Expect = 3.050e-189
Identity = 321/742 (43.26%), Postives = 460/742 (61.99%), Query Frame = 0
Query:   38 RQLFNITASYGFKTNEKANKTILLNNGAAENRITYILHLQSNEAITAIIHISTDPKIITTTSEIRQQLPHQSKTLVNFTLLHEFDGHVGVANYNLLVYTNVSQYRASGTYTVAGIVVFASEKRTPMSIASGINSPGLAF-NPSSSENNADGGYIRLELLYQPVGSDIIEIPPSLKHVLSNARVEVKDVMYGINSTLVSYDDSCSLVKNPME--SIAPSKPSMRCGICFNDTDQNLYITVNPERSGTSIIQLTIPDIEVDEEIFETDIRVFVKKPAIVHPVVLIQPDTKFVLDYFGTEVIYLQMYNIIQPDQPFNATDFIIDLDMGRYASIDISLSRFEQPIQTIAFVVQPPGKEDPGVLKKIQVALASMEDSVLDSLEQTPDVLSDMEPMPTGSIRPGQELFETKFSLGPFALENTTVFQAESEYPKFHLPVVSINDPYSIEQLPESSVHSVY---IRMGQNSDYYESNVHVIIPPPKSLRTAKNVLNNPLLTIFASNETAIVSSVLEGGNVEHVLVFLFLADYSIPTFSEHKSRQLSQALANAIGNKPDETVMSGNLTQLISNSSGIVVTYAIPVPNDSKIIANDVKNNRVDIRDKVASEIWIPPSRLALLNAVQYDPSSPSIIDAV--SSPESVLGGLSGPLLAVIIVLVIVALIPLSALCFGYMMA-------GTEQT---NSSSPQSGQSS--ESPPKMPPVLRDTLGRASEEENQDSFKMDEEMRQQGYYDASVASS 759
            R +F +   YGF T++K N TILL +GAAEN+ITYIL L+  EAITAIIHI TDP I+T+TSE R Q+ H S+   N TL H+FD HVGV  +NLLV+TN ++Y A+GTYTVAGIV +AS+  + ++IASGINSPG++F +P S  N      +RL+L YQPVG DI   PPSL  + S AR+   ++M   NSTL++Y  SC++        S+ P   ++ CGI +N +DQ L +T+ PER+G +++ +  PD++V  ++FETDI + V       P+ L+QP+T   LDYFG+E++Y+ MYN+IQPDQ FNATD++IDLD GRYA ID  LS FEQP+Q IAFVV PPG+E P + K+I  AL  ++ S  D +EQ+P  L   EP     +R G    +T  S   +           +++         ++ PY  E L    + S+Y    R      +Y S+VHV+IPP  SL TAK++L+ PLLTIFA N TAI+ S+    N  +VLV  +LA+YSI TFSEHKSRQ++ +L+ AI    +  V SGNLT L +N +G+  T+ + V  D+K I  ++  N+     ++A+++++  SRL +   + +DPSS S  D +  S   S L GL+  ++A I +L  VAL+P+  +C G++         G+ +T   N+ SP     S   S P    ++RD  GR +EE+ + SFK+++EMRQ+GY+DA   +S
Sbjct:   50 RNIF-LNTFYGFSTSQKTNTTILLIDGAAENQITYILRLRKYEAITAIIHIPTDPTILTSTSESRSQISHPSRNAFNLTLFHQFDAHVGVVTFNLLVFTNFTKYHAAGTYTVAGIVAYASQNISTLAIASGINSPGISFKSPLSLANLTAQSTVRLKLSYQPVGPDITSNPPSLLQLFSTARIHTTNLMRAANSTLINYAHSCNITSTTSNATSLLPES-AVHCGIAYNSSDQTLALTLLPERNGAAVVNIAFPDLQVHGDVFETDITLSVNISKRATPIALVQPNTTLTLDYFGSELLYVYMYNVIQPDQRFNATDYVIDLDNGRYARIDFELSTFEQPLQRIAFVVVPPGQEYPAIQKQILNALKDLKGSAQDVVEQSPTPLFTAEPEMLPGVRSGDFSRDTNLSSLSYDEHLDPTLPISADFYALENSQAVLDGPYVTEDLRMPHIRSLYDQEARRDPTKGFYVSHVHVLIPPSSSLETAKSILDTPLLTIFAPNRTAIIGSITITENYRNVLVSFWLANYSISTFSEHKSRQIASSLSKAIATMTEVQVKSGNLTHLKANVTGVEATFDVRVSTDAKKIVANLFKNKTHHEQEIAADVYLHVSRLKITRTMLHDPSSASESDLLGDSHGNSSLSGLTTAIVAAIAILAFVALLPVFVMCIGFLTVEHNHPDEGSSETGRNNAGSPPDADVSTASSAPGPGAIVRDKFGRGNEEDYE-SFKLNQEMRQRGYFDAREVTS 788          
The following BLAST results are available for this feature:
BLAST of Gchil8645.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IDM5_9FLOR3.050e-18943.26Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 728..748
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..717
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 703..761
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 12..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 699..761
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..672
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 673..698
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..25
NoneNo IPR availableTMHMMTMhelixcoord: 673..695
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:874373..876658 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8645.t1Gchil8645.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 874373..876658 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8645.t1 ID=Gchil8645.t1|Name=Gchil8645.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=762bp
MVSLQVFTVRSFIVLLVVVGTVTNAAPVQHHGGRASYRQLFNITASYGFK
TNEKANKTILLNNGAAENRITYILHLQSNEAITAIIHISTDPKIITTTSE
IRQQLPHQSKTLVNFTLLHEFDGHVGVANYNLLVYTNVSQYRASGTYTVA
GIVVFASEKRTPMSIASGINSPGLAFNPSSSENNADGGYIRLELLYQPVG
SDIIEIPPSLKHVLSNARVEVKDVMYGINSTLVSYDDSCSLVKNPMESIA
PSKPSMRCGICFNDTDQNLYITVNPERSGTSIIQLTIPDIEVDEEIFETD
IRVFVKKPAIVHPVVLIQPDTKFVLDYFGTEVIYLQMYNIIQPDQPFNAT
DFIIDLDMGRYASIDISLSRFEQPIQTIAFVVQPPGKEDPGVLKKIQVAL
ASMEDSVLDSLEQTPDVLSDMEPMPTGSIRPGQELFETKFSLGPFALENT
TVFQAESEYPKFHLPVVSINDPYSIEQLPESSVHSVYIRMGQNSDYYESN
VHVIIPPPKSLRTAKNVLNNPLLTIFASNETAIVSSVLEGGNVEHVLVFL
FLADYSIPTFSEHKSRQLSQALANAIGNKPDETVMSGNLTQLISNSSGIV
VTYAIPVPNDSKIIANDVKNNRVDIRDKVASEIWIPPSRLALLNAVQYDP
SSPSIIDAVSSPESVLGGLSGPLLAVIIVLVIVALIPLSALCFGYMMAGT
EQTNSSSPQSGQSSESPPKMPPVLRDTLGRASEEENQDSFKMDEEMRQQG
YYDASVASSEQ*
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