Gchil8587.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8587.t1
Unique NameGchil8587.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length115
Homology
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BLAST of Gchil8587.t1 vs. uniprot
Match: A0A2V3IMH8_9FLOR (Chromo domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMH8_9FLOR)

HSP 1 Score: 82.4 bits (202), Expect = 7.480e-17
Identity = 34/70 (48.57%), Postives = 49/70 (70.00%), Query Frame = 0 
Query:   10 VYPQEFVIDRIVRHIYTPEGEVRYQVRWYGFSPDEDTVEPIEHLPRSKVLSYHRRARVTLPPSLDRAQVG 79
            VYP++FVID IV H Y P  E+  +VRW+ + P  DT EP++ LP+SK++ YHRR +  +P ++D A VG
Sbjct:  172 VYPKKFVIDHIVGHRYKPTREIECRVRWFSYPPSADTDEPVDRLPQSKIVQYHRREKTGVPANIDNALVG 241
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BLAST of Gchil8587.t1 vs. uniprot
Match: A0A2V3IM99_9FLOR (Chromo domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM99_9FLOR)

HSP 1 Score: 69.7 bits (169), Expect = 8.760e-12
Identity = 32/67 (47.76%), Postives = 48/67 (71.64%), Query Frame = 0 
Query:   13 QEFVIDRIVRHIYTPEGEVRYQVRWYGFSPDEDTVEPIEHLPRSKVLSYHRRARVTLPPSLDRAQVG 79
            +E+VI+RIV H    +  +  +VRWYG++P  DT+EPI +LPR  VLSY +RA + +P ++D A+VG
Sbjct:  236 REYVIERIVFHGRDADNCLLCKVRWYGYAPSSDTLEPIGNLPRPHVLSYCKRANLAIPDNIDDARVG 302
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BLAST of Gchil8587.t1 vs. uniprot
Match: R7QIA9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA9_CHOCR)

HSP 1 Score: 67.4 bits (163), Expect = 9.250e-11
Identity = 28/67 (41.79%), Postives = 48/67 (71.64%), Query Frame = 0 
Query:   13 QEFVIDRIVRHIYTPEGEVRYQVRWYGFSPDEDTVEPIEHLPRSKVLSYHRRARVTLPPSLDRAQVG 79
            +E+V+D +V H Y  +G++ ++VR YG++P++DT EPI HL R+ V+ Y +R  + +P S+ RA+ G
Sbjct:  425 EEYVVDHVVAHRYDDDGKLVFRVRLYGYTPEDDTEEPISHLRRNHVILYCKRKGLNVPDSIIRARQG 491
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BLAST of Gchil8587.t1 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR)

HSP 1 Score: 63.9 bits (154), Expect = 1.610e-9
Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:   13 QEFVIDRIVRHIYTPEGEVRYQVRWYGFSPDEDTVEPIEHLPRSKVLSYHRRARVTLPPSLDRAQVG 79
            QE+VID+IV H Y  E  +  +VRWYG++ ++ T EPIE +PRS V+ Y RR ++ LP     AQ G
Sbjct:  799 QEYVIDKIVDHGYDEEKLI-LKVRWYGYTIEDATWEPIEQIPRSAVVIYFRRKKLPLPTQASHAQPG 864
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BLAST of Gchil8587.t1 vs. uniprot
Match: A0A2V3ITV0_9FLOR (DNA (Cytosine-5)-methyltransferase CMT2 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITV0_9FLOR)

HSP 1 Score: 60.5 bits (145), Expect = 4.900e-9
Identity = 32/71 (45.07%), Postives = 46/71 (64.79%), Query Frame = 0 
Query:   10 VYPQEFVIDRIVRHIYTPEG-EVRYQVRWYGFSPDEDTVEPIEHLPRSKVLSYHRRARVTLPPSLDRAQVG 79
            V   E+VI  IV   +  +G +++Y+VRW G+ P+ D   PIE+LPRS V+ YHRR ++ LP +L  A VG
Sbjct:   82 VEDSEYVIACIVDKAFHEDGPKLQYRVRWCGYPPNVDAWYPIENLPRSHVVRYHRRKKLPLPANLVDALVG 152
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BLAST of Gchil8587.t1 vs. uniprot
Match: UPI001E1DDCB5 (M-phase phosphoprotein 8-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DDCB5)

HSP 1 Score: 55.1 bits (131), Expect = 5.320e-7
Identity = 24/51 (47.06%), Postives = 34/51 (66.67%), Query Frame = 0 
Query:   14 EFVIDRIVRHIYTPEGEVRYQVRWYGFSPDEDTVEPIEHLPRSKVLSYHRR 64
            E+V +RIV      +G + Y VRW+G++ D+DT EP EH+P S +  YHRR
Sbjct:  107 EYVFERIVCTKQAKDGPMLYPVRWFGYTRDDDTWEPKEHIPISALRRYHRR 157
The following BLAST results are available for this feature:
BLAST of Gchil8587.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IMH8_9FLOR7.480e-1748.57Chromo domain-containing protein n=1 Tax=Gracilari... [more]
A0A2V3IM99_9FLOR8.760e-1247.76Chromo domain-containing protein n=1 Tax=Gracilari... [more]
R7QIA9_CHOCR9.250e-1141.79Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QG36_CHOCR1.610e-947.76Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A2V3ITV0_9FLOR4.900e-945.07DNA (Cytosine-5)-methyltransferase CMT2 n=1 Tax=Gr... [more]
UPI001E1DDCB55.320e-747.06M-phase phosphoprotein 8-like n=1 Tax=Mercenaria m... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000953Chromo/chromo shadow domainSMARTSM00298chromo_7coord: 14..66
e-value: 6.8E-6
score: 35.6
IPR000953Chromo/chromo shadow domainPROSITEPS50013CHROMO_2coord: 15..74
score: 9.317601
IPR023780Chromo domainPFAMPF00385Chromocoord: 15..64
e-value: 3.0E-7
score: 30.3
NoneNo IPR availableGENE3D2.40.50.40coord: 12..68
e-value: 2.9E-10
score: 41.7
NoneNo IPR availableCDDcd00024CD_CSDcoord: 15..53
e-value: 4.1029E-7
score: 41.6937
IPR016197Chromo-like domain superfamilySUPERFAMILY54160Chromo domain-likecoord: 9..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:450500..450975 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8587.t1Gchil8587.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 450500..450975 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8587.t1 ID=Gchil8587.t1|Name=Gchil8587.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=115bp
MEEKPEQGKVYPQEFVIDRIVRHIYTPEGEVRYQVRWYGFSPDEDTVEPI
EHLPRSKVLSYHRRARVTLPPSLDRAQVGAVNRGTQHRLSGHFMMKKEKK
THEVEKKSKKKIGP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000953Chromo/chromo_shadow_dom
IPR023780Chromo_domain
IPR016197Chromo-like_dom_sf