Gchil8636.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8636.t1
Unique NameGchil8636.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length986
Homology
BLAST of Gchil8636.t1 vs. uniprot
Match: A0A2V3IMX5_9FLOR (Sister chromatid cohesion 1 protein 4 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMX5_9FLOR)

HSP 1 Score: 738 bits (1904), Expect = 2.690e-251
Identity = 468/987 (47.42%), Postives = 580/987 (58.76%), Query Frame = 0
Query:    1 MKHHVASVSDGSDVVAIDLSPSMPAIRAPSSVQIATSAKAKRLPNAIPVRTEFVFCASQPHASVLLCGDWCDWHPIHMNIEQELVWSVITVVPTGYREFFYIVDGTTMLSTKHPTNAQGTRNWRTVYGPPHRLRNRQSSLHCTQFERAIDSLSDSLRKFLIAAFQPDQLSKRTERRLQSQLQPELVRDIENSLVPADNSRLWYHSCANPIRVVVFFFVCYGAGICVGPLGKVWVAATLGESKIPKSYALSCRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQSIVDALKRLDVHTQSKSSGRKRGRDVAPSLSTRGGGIKGISLEEGQDLARLDMITLPVSKKHRTRTYAIPSLGKGRSLKSRYNEVKIDGEQSVASLGDISISMAPELDVFEAMETLFPSVVVPRFGQQQRGTSRTPSSDLQSETQRSLLHRAREEDITLVP-STGFGNLRQELFLEDLPVSLESQQPSVLIQPEPVLSSGEDQDG--IRPFAVGSDVPSSAMEDVYPPRDSLPPQDDFVAALEPEDIEPLQIVPFALGDTPSQLIEGRNAIEETREGIPALTMKASVKSAKSSSEDRSTKKTVDPMSAVPLSTRTKRISRVRFDDITELSPEQIRASLQDTSDIVLADGEERYSRRRGKHFRGVASKSSEIPLSLFSFPESIVDMWNELNEGLAEDSQPAPSVSHARSPELQLSFSDERXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQPIQTTPRQRSAEILRDSVMRQGTPAVLSDHSRSLVGTSGSKSFPSRSGSLRTRAARLRDHIFEMITEADEKSFRDAREKSGTLRKSAG-----PDFSVDSKNEGFGTAAAVGQGERDAARLELRASDFQLVEETDKDDDQNEKKRAPFESIGIHAYKMLELLRAEADSRELPSDVEQEGEVTTFGTLVKDCSRGVTARAFFNVLSLASSGFIRVSQERPYASIQIRKGSFF 979
            MKHH    S  +D V IDLSPSMPAI APS  +  +S  AKR PNAIPVRTEFVFCA+Q H+SVLLCGDW DWHPIHM +EQE +WSVITVVPTGYR+FFY+VDG+ MLSTKHPTNA GT                                                L+K+                                                      GPLGKVWVAATLGESKIPKSYALSCRIHVLC+NIE+PAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQ+IV+ALKR DVH+ SKS  R+R RD A S ST   G  GISLE+G D+ARLD+ITLP +KK R RTYAIP+  + RS +S+  E + +      SLGDISI  A EL+V EAME LFP+VVVPR    Q G SRTP     ++++RSL+++AREEDITL P +T  G+L QE+FL DLPVSL+S+  S+  QP   + SG D D   IRPF V S+VPSSA +           + D +A  EP+D++PL+I PF L D  S L     +       +P  + + SV S + +S+ RS KK++   S    STRTKR + +RFD++TELS +QIR SL DT+DIVLA GE RY ++RGK   G + +   +P  + SFP+ I D+W EL   L   S+   +   +    L                                                +   +T P   + E+LR   + + +PA LS HSRS+   SG+ S PS S SL+ R ARLRDHI E ITEAD KSF  AR    + R S G     P+ S ++K+ G  T     + E D  RLELRASDFQLVEET+KD+ + E  RA F S+GI ++K+LELLRAEA+SR++ ++ E E  +TTF  LV+DCSRGV ARAFFN+L LA+SGFI+V Q   YA I I+KG  F
Sbjct:    1 MKHHRPGSSGSNDAVTIDLSPSMPAIIAPSK-RPPSSVGAKRKPNAIPVRTEFVFCATQHHSSVLLCGDWDDWHPIHMTLEQEYLWSVITVVPTGYRQFFYMVDGSFMLSTKHPTNADGTL-----------------------------------------------LTKK------------------------------------------------------GPLGKVWVAATLGESKIPKSYALSCRIHVLCENIERPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQAIVEALKRFDVHSVSKSMKRRRTRDTASSYSTHAHGA-GISLEDGDDVARLDLITLPAAKKRRGRTYAIPAPKRSRSTRSKDTETERN-----MSLGDISIPEATELNVMEAMENLFPAVVVPRLSPFQGGRSRTPGHLFPTQSERSLVYKAREEDITLAPPATHLGDLDQEVFLGDLPVSLDSRPASIASQPFSAVVSGNDVDSVAIRPFGVASEVPSSAAQGDQDSGAGDNLEHDLLAVPEPDDMQPLEIGPFDLEDATSHLSRRDRSPLRGPGDLPVSSTRQSVISGQVTSDARSGKKSILTTSGHQSSTRTKRYTPIRFDEVTELSADQIRESLNDTTDIVLAPGEVRYPKKRGKR-AGASPRHKFLPHPISSFPQDITDIWEELTGNLLGISELPIADGQSLEERLSSGGKSPPQVDAETPSPARPEIDPILPEVRAPEVPLVADEPMVVEDPFLGRGETEPG--AVEVLRRDTIHRESPAALS-HSRSMRNKSGTGSHPSASSSLQRRTARLRDHILEQITEADRKSFEHARLHGSSRRPSVGQQGSQPEVSDENKSVGVVTDEGDRKNEDDG-RLELRASDFQLVEETEKDELKAETSRASFLSLGIRSFKLLELLRAEAESRDVGTEAEDEDGITTFKELVQDCSRGVIARAFFNMLCLANSGFIKVRQGGAYAPIVIQKGPMF 874          
BLAST of Gchil8636.t1 vs. uniprot
Match: A0A7S1XD93_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1XD93_9RHOD)

HSP 1 Score: 82.8 bits (203), Expect = 3.650e-14
Identity = 44/103 (42.72%), Postives = 55/103 (53.40%), Query Frame = 0
Query:   49 VRTEFVFC-----------------ASQPHASVLLCGDWCDWHPIHM--NIEQELVWSVITVVPTGYREFFYIVDGTTMLSTKHPTNAQGTRNWRTVYGPPHR 132
            VRTEF++                  A++    V LCGDW  W PI M  ++    VW+VIT+VP GY EF YIV+G   +ST HP  A  + NWR V GPP R
Sbjct:   11 VRTEFIYAEQMLPEFAKGDGGXXXXAARGLDMVALCGDWNHWTPIPMIRDLRDRRVWAVITLVPAGYHEFCYIVNGEHRVSTGHPLTADESCNWRYVKGPPRR 113          
BLAST of Gchil8636.t1 vs. uniprot
Match: M2XYZ1_GALSU (Synapsin I n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XYZ1_GALSU)

HSP 1 Score: 87.4 bits (215), Expect = 7.370e-14
Identity = 64/180 (35.56%), Postives = 96/180 (53.33%), Query Frame = 0
Query:  227 GPLGKVWVAATLGESKIPKSYALSCRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQSIVDALKRLDVHTQSKSSGRKRGRDVAPSLSTRGGGIKGISLEEGQDLARLDMITLPVSKKHRTRTYAIPSLGKGRSLKSRYNEVKIDGEQSVASLGDISISMAPELDVFE 406
            GPLG+VW+AAT+G+ +I K +AL   I  LC  + +P  P+ALRLSA LM+G+ R++ +K   V       +  L RLD       SG ++  D+  S+S+ G     I+L +G   A L+ ITL       TRT   P    GR L+S  N ++  G + +  L ++ I   P+  +FE
Sbjct:   12 GPLGRVWLAATIGKERIQKKFALDVSISSLCAEVLRPTNPYALRLSAQLMIGICRIFEKKCSIVFISANDTIYQLSRLD-------SGARKTTDIF-SVSSSGQ----INLTKGT--ANLENITLT------TRTVPYPP-EIGRLLQSVENNIQFLGHEKL--LQNLLIDTRPDAILFE 168          
BLAST of Gchil8636.t1 vs. uniprot
Match: A0A5J4YK32_PORPP (AMPK1_CBM domain-containing protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YK32_PORPP)

HSP 1 Score: 82.4 bits (202), Expect = 3.810e-13
Identity = 41/116 (35.34%), Postives = 69/116 (59.48%), Query Frame = 0
Query:   25 AIRAPSSVQIATSAKAKRLPNAIPVRTEFVFCASQPHASVLLCGDWCDWHPIHMNIEQEL--VWSVITVVPTGYREFFYIVDGTTMLSTKHPTNAQGTRNWRTVYGPPHRLRNRQS 138
            A+R+ +S+ +     +      +PV  EF+F  +   A V LCGDW  W PI M   ++   ++SV+T++P GY E+F++V+G  ++S  HP N +G+ NWR +     RLR+R++
Sbjct:  103 ALRSVASMSVVFEGSSNEERLRVPV--EFIFGDANQDARVALCGDWNSWRPIPMQRAKQSNKLFSVVTLLPAGYCEYFFLVNGERVVSQAHPRNLEGSANWRNIVSD-RRLRSRKT 215          
BLAST of Gchil8636.t1 vs. uniprot
Match: A0A7S0EXJ0_9EUKA (Hypothetical protein n=2 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EXJ0_9EUKA)

HSP 1 Score: 76.6 bits (187), Expect = 1.300e-10
Identity = 42/102 (41.18%), Postives = 60/102 (58.82%), Query Frame = 0
Query:  227 GPLGKVWVAATLGESKIPKSYALSCRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQSIVDALKRLDVHTQSKSSGRKRGRDVAPSLSTR 328
            GPLGK+W+AA +GE K+PK   ++  I     +IE P+ P ALR+S  LMLGVVR++SRK  ++L D    +  +K        +  G   G D+AP  +TR
Sbjct:   12 GPLGKIWLAAHMGEKKVPKVQVVATNIPESIAHIENPSVPMALRMSGHLMLGVVRIFSRKVTYLLSDCSEAMVKIK-----DAFRGPG---GVDMAPGAATR 105          
BLAST of Gchil8636.t1 vs. uniprot
Match: B8C9U8_THAPS (Rad21_Rec8_N domain-containing protein (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9U8_THAPS)

HSP 1 Score: 65.9 bits (159), Expect = 1.630e-9
Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 0
Query:  227 GPLGKVWVAATLGESKIPKSYALSCRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQSIVDALK 302
            GPLGKVW+AA  G+ KI +    S  I     +I  P  P ALR+S  L+LGVVR+YSRK  +++ D    +  +K
Sbjct:   12 GPLGKVWLAAHWGDKKITRPQIFSTDIATSVDSIVNPTVPLALRVSGHLLLGVVRIYSRKVRYLMHDCHEAMVKIK 87          
BLAST of Gchil8636.t1 vs. uniprot
Match: M2WXZ5_GALSU (Cohesin complex subunit SCC1 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WXZ5_GALSU)

HSP 1 Score: 72.0 bits (175), Expect = 3.670e-9
Identity = 68/232 (29.31%), Postives = 111/232 (47.84%), Query Frame = 0
Query:  227 GPLGKVWVAATLGESKIPKSYALSCRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQSIVDALKRLDVHTQSKSSGRKRGRDVAPSLSTRGGGIKGISLEEGQDLARLDMITLPVSKKHRTRTYAIPSLGKGRSLKSRYNEVKIDGEQSVASLGDISISMAPELDVFEAMETLFPSVVVPRFGQQQRGTSRTPSSDLQ-SETQRSLLH-RAREEDITLVP 456
            GPLGK+W+AA L + K+ K+   S  +   C+ ++ P   FALRLS++L+LG+VR+YSRK+ ++  D +   +AL +L +  Q  +     G  VAP  +        I++E   D ++L        K+  +         K  S +SRY   ++D     +S+ DI + +  + D+   +                       SS+ + +ET +SL   RAR EDITL P
Sbjct:   12 GPLGKIWLAAHL-QHKLSKTQVFSTDVVAACEQLQSPELSFALRLSSNLLLGIVRIYSRKAHYLFIDSR---EALNKLQLVFQGNTVDLAPGTTVAPYSA--------ITMEGVDDTSQL--------KREES--------SKKSSKRSRY---ELDRFSETSSILDIDMLLDMDTDMACTLS----------------------SSEFRWNETAQSLSRFRARPEDITLPP 190          
BLAST of Gchil8636.t1 vs. uniprot
Match: A0A6U6IWB3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A6U6IWB3_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 3.950e-9
Identity = 33/76 (43.42%), Postives = 46/76 (60.53%), Query Frame = 0
Query:  227 GPLGKVWVAATLGESKIPKSYALSCRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQSIVDALK 302
            GPLGKVW+AA  G+ K+ +    S  I     +I  PA P ALR+S  L+LGVVR+YSRK  +++ D    +  +K
Sbjct:   12 GPLGKVWLAAHWGDKKLGRPQIFSTDISSSVDSIVNPAVPLALRVSGHLLLGVVRIYSRKVRYLMHDCHEAMVKIK 87          
BLAST of Gchil8636.t1 vs. uniprot
Match: A0A7S4EQQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4EQQ1_9STRA)

HSP 1 Score: 68.9 bits (167), Expect = 4.990e-9
Identity = 33/67 (49.25%), Postives = 44/67 (65.67%), Query Frame = 0
Query:  227 GPLGKVWVAATLGESKIPKSYALSCRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKD 293
            GPL KVW+AA  G+ K+ +    +  I   C +I  P+ P ALRLS  L+LGVVR+YSRK ++VL D
Sbjct:   12 GPLAKVWLAAHWGDKKLARPQIFATDISQSCTDIMNPSVPLALRLSGHLLLGVVRIYSRKVKYVLND 78          
BLAST of Gchil8636.t1 vs. uniprot
Match: A0A7S0NVL9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NVL9_9EUKA)

HSP 1 Score: 66.6 bits (161), Expect = 5.330e-9
Identity = 40/103 (38.83%), Postives = 58/103 (56.31%), Query Frame = 0
Query:  227 GPLGKVWVAATLGESKIPKSYALSCRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQSIVDALKRLDVHTQSKSSGRKRGR-DVAPSLSTR 328
            GPLGK+W+AA + E K+PK   ++  I     +IE P  P ALR+S  L+LGVVR++SRK  ++L D    +          + K + R  G  ++AP  STR
Sbjct:   12 GPLGKIWLAAHM-EKKVPKLQIIATNIAESVDSIENPTVPMALRVSGHLLLGVVRIFSRKVHYLLTDCSEAM---------VKIKDAFRGPGAVEMAPGASTR 104          
The following BLAST results are available for this feature:
BLAST of Gchil8636.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IMX5_9FLOR2.690e-25147.42Sister chromatid cohesion 1 protein 4 n=1 Tax=Grac... [more]
A0A7S1XD93_9RHOD3.650e-1442.72Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
M2XYZ1_GALSU7.370e-1435.56Synapsin I n=1 Tax=Galdieria sulphuraria TaxID=130... [more]
A0A5J4YK32_PORPP3.810e-1335.34AMPK1_CBM domain-containing protein n=1 Tax=Porphy... [more]
A0A7S0EXJ0_9EUKA1.300e-1041.18Hypothetical protein n=2 Tax=Phaeocystis antarctic... [more]
B8C9U8_THAPS1.630e-943.42Rad21_Rec8_N domain-containing protein (Fragment) ... [more]
M2WXZ5_GALSU3.670e-929.31Cohesin complex subunit SCC1 n=1 Tax=Galdieria sul... [more]
A0A6U6IWB3_9STRA3.950e-943.42Hypothetical protein (Fragment) n=1 Tax=Odontella ... [more]
A0A7S4EQQ1_9STRA4.990e-949.25Hypothetical protein (Fragment) n=1 Tax=Pseudo-nit... [more]
A0A7S0NVL9_9EUKA5.330e-938.83Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006909Rad21/Rec8-like protein, C-terminal, eukaryoticPFAMPF04824Rad21_Rec8coord: 926..976
e-value: 1.3E-11
score: 43.6
IPR023093ScpA-like, C-terminalGENE3D1.10.10.580Structural maintenance of chromosome 1. Chain Ecoord: 902..980
e-value: 6.2E-8
score: 34.3
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10Immunoglobulinscoord: 46..127
e-value: 1.3E-7
score: 33.3
IPR006910Rad21/Rec8-like protein, N-terminalPFAMPF04825Rad21_Rec8_Ncoord: 227..307
e-value: 6.0E-22
score: 77.9
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 708..765
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..442
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 708..737
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 422..440
NoneNo IPR availableCDDcd02859E_set_AMPKbeta_like_Ncoord: 51..122
e-value: 9.38945E-9
score: 51.0605
IPR039781Rad21/Rec8-like proteinPANTHERPTHR12585SCC1 / RAD21 FAMILY MEMBERcoord: 227..977
IPR036390Winged helix DNA-binding domain superfamilySUPERFAMILY46785"Winged helix" DNA-binding domaincoord: 926..979
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 58..124

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000088_piloncontigtig00000088_pilon:850117..854122 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8636.t1Gchil8636.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000088_pilon 850117..854122 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8636.t1 ID=Gchil8636.t1|Name=Gchil8636.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=986bp
MKHHVASVSDGSDVVAIDLSPSMPAIRAPSSVQIATSAKAKRLPNAIPVR
TEFVFCASQPHASVLLCGDWCDWHPIHMNIEQELVWSVITVVPTGYREFF
YIVDGTTMLSTKHPTNAQGTRNWRTVYGPPHRLRNRQSSLHCTQFERAID
SLSDSLRKFLIAAFQPDQLSKRTERRLQSQLQPELVRDIENSLVPADNSR
LWYHSCANPIRVVVFFFVCYGAGICVGPLGKVWVAATLGESKIPKSYALS
CRIHVLCKNIEKPAAPFALRLSASLMLGVVRVYSRKSEFVLKDVQSIVDA
LKRLDVHTQSKSSGRKRGRDVAPSLSTRGGGIKGISLEEGQDLARLDMIT
LPVSKKHRTRTYAIPSLGKGRSLKSRYNEVKIDGEQSVASLGDISISMAP
ELDVFEAMETLFPSVVVPRFGQQQRGTSRTPSSDLQSETQRSLLHRAREE
DITLVPSTGFGNLRQELFLEDLPVSLESQQPSVLIQPEPVLSSGEDQDGI
RPFAVGSDVPSSAMEDVYPPRDSLPPQDDFVAALEPEDIEPLQIVPFALG
DTPSQLIEGRNAIEETREGIPALTMKASVKSAKSSSEDRSTKKTVDPMSA
VPLSTRTKRISRVRFDDITELSPEQIRASLQDTSDIVLADGEERYSRRRG
KHFRGVASKSSEIPLSLFSFPESIVDMWNELNEGLAEDSQPAPSVSHARS
PELQLSFSDERSLQLADGGSVSPGQQQMPSPLQSEQPHVTLAEEEPMLLP
EIQPIQTTPRQRSAEILRDSVMRQGTPAVLSDHSRSLVGTSGSKSFPSRS
GSLRTRAARLRDHIFEMITEADEKSFRDAREKSGTLRKSAGPDFSVDSKN
EGFGTAAAVGQGERDAARLELRASDFQLVEETDKDDDQNEKKRAPFESIG
IHAYKMLELLRAEADSRELPSDVEQEGEVTTFGTLVKDCSRGVTARAFFN
VLSLASSGFIRVSQERPYASIQIRKGSFFGSQQHA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006909Rad21/Rec8_C_eu
IPR023093ScpA-like_C
IPR013783Ig-like_fold
IPR006910Rad21_Rec8_N
IPR039781Rad21/Rec8-like
IPR036390WH_DNA-bd_sf
IPR014756Ig_E-set