Gchil3995.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil3995.t1
Unique NameGchil3995.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length315
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:245269..246213 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3995Gchil3995Gracilaria chilensis NLEC103_M9 malegenetig00000081_pilon 245269..246213 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3995.t1.stop1Gchil3995.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000081_pilon 245269..245271 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3995.t1.CDS1Gchil3995.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000081_pilon 245269..246213 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3995.t1.exon1Gchil3995.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000081_pilon 245269..246213 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3995.t1.start1Gchil3995.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000081_pilon 246211..246213 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil3995.t1Gchil3995.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000081_pilon 245269..246213 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil3995.t1 ID=Gchil3995.t1|Name=Gchil3995.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=315bp
MYFEQYCPKIARNKSLYLVFVTVLLFTSLVAAFFLRAMQPSAANPLAVRL
APNIDSLLTDEALLDEIAANKQFAYFPSADLLLASVAKAGSTSMFQWLYS
GITGNKEYSNDVCGTNVQDIQSDCWNSKAVYLKDISMAERRRILSSKSTL
RVAIQRNPFDRLISAFNDKFACVTEQFNADLAYSIIVPYLRELAELPESP
KKCMNISEFAEALDLVREKKVVPLQQLDVHIRPQQLHFDYIPYDIIVDVK
RLSNVSLLQPLVDRLPFGDLVKEGIEHRHAVKRAELMIPEKTAKRLYLFA
TESDVGEERFPVHS*
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spliced messenger RNA

>Gchil3995.t1 ID=Gchil3995.t1|Name=Gchil3995.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=945bp|location=Sequence derived from alignment at tig00000081_pilon:245269..246213- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTACTTCGAGCAATATTGCCCAAAGATTGCGCGCAACAAATCGCTCTA
CCTTGTGTTCGTCACCGTTTTGCTCTTCACGTCGTTGGTAGCCGCATTCT
TCCTTCGAGCGATGCAACCCAGCGCTGCAAACCCGCTAGCGGTCAGATTG
GCCCCGAATATCGACTCTCTTCTCACCGATGAGGCCTTGCTGGATGAAAT
TGCTGCAAACAAGCAGTTTGCATACTTTCCCTCCGCGGATCTGCTGCTCG
CTTCGGTAGCAAAGGCCGGAAGTACTTCTATGTTCCAGTGGTTATATAGC
GGTATCACGGGGAATAAAGAGTACTCGAACGACGTGTGTGGCACCAATGT
ACAAGACATACAGTCAGACTGTTGGAACTCTAAAGCAGTTTATTTGAAGG
ACATTTCGATGGCCGAACGTCGTCGCATTCTCAGCTCTAAATCTACGTTG
CGAGTGGCGATACAACGGAATCCATTTGATCGGCTCATCTCCGCATTCAA
TGACAAGTTTGCTTGTGTGACGGAGCAGTTCAACGCTGATCTGGCGTACA
GCATCATCGTGCCATATCTTAGAGAGCTGGCTGAGCTCCCGGAATCGCCG
AAAAAGTGCATGAATATAAGCGAATTTGCAGAAGCACTTGATCTGGTGCG
CGAGAAAAAAGTGGTACCGCTTCAACAGTTAGATGTTCACATTCGCCCTC
AACAACTGCACTTTGATTACATCCCGTATGACATTATTGTTGACGTGAAG
CGGTTGTCAAATGTGAGCTTGTTGCAACCGTTGGTTGACCGTCTTCCTTT
TGGTGATCTGGTCAAAGAGGGAATTGAACATCGACACGCTGTGAAACGGG
CCGAACTGATGATTCCTGAGAAAACCGCGAAAAGATTGTATCTCTTTGCA
ACCGAATCGGACGTGGGAGAAGAACGTTTTCCTGTTCACTCTTGA
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protein sequence of Gchil3995.t1

>Gchil3995.t1 ID=Gchil3995.t1|Name=Gchil3995.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=315bp
MYFEQYCPKIARNKSLYLVFVTVLLFTSLVAAFFLRAMQPSAANPLAVRL
APNIDSLLTDEALLDEIAANKQFAYFPSADLLLASVAKAGSTSMFQWLYS
GITGNKEYSNDVCGTNVQDIQSDCWNSKAVYLKDISMAERRRILSSKSTL
RVAIQRNPFDRLISAFNDKFACVTEQFNADLAYSIIVPYLRELAELPESP
KKCMNISEFAEALDLVREKKVVPLQQLDVHIRPQQLHFDYIPYDIIVDVK
RLSNVSLLQPLVDRLPFGDLVKEGIEHRHAVKRAELMIPEKTAKRLYLFA
TESDVGEERFPVHS*
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mRNA from alignment at tig00000081_pilon:245269..246213-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil3995.t1 ID=Gchil3995.t1|Name=Gchil3995.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=945bp|location=Sequence derived from alignment at tig00000081_pilon:245269..246213- (Gracilaria chilensis NLEC103_M9 male)
ATGTACTTCGAGCAATATTGCCCAAAGATTGCGCGCAACAAATCGCTCTA
CCTTGTGTTCGTCACCGTTTTGCTCTTCACGTCGTTGGTAGCCGCATTCT
TCCTTCGAGCGATGCAACCCAGCGCTGCAAACCCGCTAGCGGTCAGATTG
GCCCCGAATATCGACTCTCTTCTCACCGATGAGGCCTTGCTGGATGAAAT
TGCTGCAAACAAGCAGTTTGCATACTTTCCCTCCGCGGATCTGCTGCTCG
CTTCGGTAGCAAAGGCCGGAAGTACTTCTATGTTCCAGTGGTTATATAGC
GGTATCACGGGGAATAAAGAGTACTCGAACGACGTGTGTGGCACCAATGT
ACAAGACATACAGTCAGACTGTTGGAACTCTAAAGCAGTTTATTTGAAGG
ACATTTCGATGGCCGAACGTCGTCGCATTCTCAGCTCTAAATCTACGTTG
CGAGTGGCGATACAACGGAATCCATTTGATCGGCTCATCTCCGCATTCAA
TGACAAGTTTGCTTGTGTGACGGAGCAGTTCAACGCTGATCTGGCGTACA
GCATCATCGTGCCATATCTTAGAGAGCTGGCTGAGCTCCCGGAATCGCCG
AAAAAGTGCATGAATATAAGCGAATTTGCAGAAGCACTTGATCTGGTGCG
CGAGAAAAAAGTGGTACCGCTTCAACAGTTAGATGTTCACATTCGCCCTC
AACAACTGCACTTTGATTACATCCCGTATGACATTATTGTTGACGTGAAG
CGGTTGTCAAATGTGAGCTTGTTGCAACCGTTGGTTGACCGTCTTCCTTT
TGGTGATCTGGTCAAAGAGGGAATTGAACATCGACACGCTGTGAAACGGG
CCGAACTGATGATTCCTGAGAAAACCGCGAAAAGATTGTATCTCTTTGCA
ACCGAATCGGACGTGGGAGAAGAACGTTTTCCTGTTCACTCTTGA
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Coding sequence (CDS) from alignment at tig00000081_pilon:245269..246213-

>Gchil3995.t1 ID=Gchil3995.t1|Name=Gchil3995.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=945bp|location=Sequence derived from alignment at tig00000081_pilon:245269..246213- (Gracilaria chilensis NLEC103_M9 male)
ATGTACTTCGAGCAATATTGCCCAAAGATTGCGCGCAACAAATCGCTCTA
CCTTGTGTTCGTCACCGTTTTGCTCTTCACGTCGTTGGTAGCCGCATTCT
TCCTTCGAGCGATGCAACCCAGCGCTGCAAACCCGCTAGCGGTCAGATTG
GCCCCGAATATCGACTCTCTTCTCACCGATGAGGCCTTGCTGGATGAAAT
TGCTGCAAACAAGCAGTTTGCATACTTTCCCTCCGCGGATCTGCTGCTCG
CTTCGGTAGCAAAGGCCGGAAGTACTTCTATGTTCCAGTGGTTATATAGC
GGTATCACGGGGAATAAAGAGTACTCGAACGACGTGTGTGGCACCAATGT
ACAAGACATACAGTCAGACTGTTGGAACTCTAAAGCAGTTTATTTGAAGG
ACATTTCGATGGCCGAACGTCGTCGCATTCTCAGCTCTAAATCTACGTTG
CGAGTGGCGATACAACGGAATCCATTTGATCGGCTCATCTCCGCATTCAA
TGACAAGTTTGCTTGTGTGACGGAGCAGTTCAACGCTGATCTGGCGTACA
GCATCATCGTGCCATATCTTAGAGAGCTGGCTGAGCTCCCGGAATCGCCG
AAAAAGTGCATGAATATAAGCGAATTTGCAGAAGCACTTGATCTGGTGCG
CGAGAAAAAAGTGGTACCGCTTCAACAGTTAGATGTTCACATTCGCCCTC
AACAACTGCACTTTGATTACATCCCGTATGACATTATTGTTGACGTGAAG
CGGTTGTCAAATGTGAGCTTGTTGCAACCGTTGGTTGACCGTCTTCCTTT
TGGTGATCTGGTCAAAGAGGGAATTGAACATCGACACGCTGTGAAACGGG
CCGAACTGATGATTCCTGAGAAAACCGCGAAAAGATTGTATCTCTTTGCA
ACCGAATCGGACGTGGGAGAAGAACGTTTTCCTGTTCACTCTTGA
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