Gchil4012.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil4012.t1
Unique NameGchil4012.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length164
Homology
BLAST of Gchil4012.t1 vs. uniprot
Match: A0A2V3IM51_9FLOR (DNA replication licensing factor MCM5 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IM51_9FLOR)

HSP 1 Score: 88.2 bits (217), Expect = 2.740e-17
Identity = 48/69 (69.57%), Postives = 50/69 (72.46%), Query Frame = 0
Query:   55 AAKVLRWSCAVAIAMR----KITVPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            A+KV   S AV +  R    KITVPVNP LGGFAVPRACRR    DETPCPLD YVVL DESKFM SQT
Sbjct:  191 ASKVRCKSTAVVLRCRNCNEKITVPVNPGLGGFAVPRACRRQSAPDETPCPLDAYVVLADESKFMDSQT 259          
BLAST of Gchil4012.t1 vs. uniprot
Match: R7QT75_CHOCR (DNA replication licensing factor MCM5 n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QT75_CHOCR)

HSP 1 Score: 76.3 bits (186), Expect = 3.920e-13
Identity = 35/49 (71.43%), Postives = 39/49 (79.59%), Query Frame = 0
Query:   71 KITVPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            KITV VNP LGGFAVPR CRR +  +E  CPLDPYVVL D+SKFM +QT
Sbjct:  219 KITVGVNPGLGGFAVPRTCRRVLGENEVDCPLDPYVVLADDSKFMDNQT 267          
BLAST of Gchil4012.t1 vs. uniprot
Match: UPI001E1D8AF6 (LOW QUALITY PROTEIN: DNA replication licensing factor MCM5-like n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D8AF6)

HSP 1 Score: 73.9 bits (180), Expect = 2.410e-12
Identity = 39/69 (56.52%), Postives = 45/69 (65.22%), Query Frame = 0
Query:   55 AAKVLRWSCAVAIAMR----KITVPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            A+KVL  S  V +  R    KITV VN  LGGF+ PR CRR     E PCPLDPYVVLPDE +++ SQT
Sbjct:   82 ASKVLCKSTVVRLKCRNCADKITVHVNAGLGGFSAPRQCRRPPGEGEAPCPLDPYVVLPDEGRYVDSQT 150          
BLAST of Gchil4012.t1 vs. uniprot
Match: A0A426YG06_ENSVE (MCM_OB domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426YG06_ENSVE)

HSP 1 Score: 58.9 bits (141), Expect = 1.910e-8
Identity = 25/47 (53.19%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   73 TVPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            TVP  P LGG  VPR+C    +  E PCPLDP++V PD+SK++  QT
Sbjct:   36 TVPCRPGLGGAIVPRSCDHVPQAGEEPCPLDPWIVAPDKSKYVDLQT 82          
BLAST of Gchil4012.t1 vs. uniprot
Match: A0A0K9NW09_ZOSMR (DNA replication licensing factor MCM5 n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9NW09_ZOSMR)

HSP 1 Score: 61.2 bits (147), Expect = 6.260e-8
Identity = 26/47 (55.32%), Postives = 33/47 (70.21%), Query Frame = 0
Query:   73 TVPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            TVP  P LGG  +PR+C  T +  E PCPLDP+VV PD+SK++  QT
Sbjct:  185 TVPCRPGLGGAIIPRSCDHTPQAGEEPCPLDPWVVAPDKSKYVDMQT 231          
BLAST of Gchil4012.t1 vs. uniprot
Match: A0A6P6SUD3_COFAR (DNA replication licensing factor MCM5 n=4 Tax=Coffea TaxID=13442 RepID=A0A6P6SUD3_COFAR)

HSP 1 Score: 60.5 bits (145), Expect = 1.160e-7
Identity = 25/46 (54.35%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   74 VPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            VP  P LGG  VPR+C  T +  E PCP+DP+VV+PD SK++  QT
Sbjct:  189 VPCRPGLGGAIVPRSCDHTPQTGEEPCPVDPWVVIPDRSKYVDQQT 234          
BLAST of Gchil4012.t1 vs. uniprot
Match: A0A804NWU2_MAIZE (DNA replication licensing factor MCM5 n=1 Tax=Zea mays TaxID=4577 RepID=A0A804NWU2_MAIZE)

HSP 1 Score: 58.2 bits (139), Expect = 1.360e-7
Identity = 24/47 (51.06%), Postives = 32/47 (68.09%), Query Frame = 0
Query:   73 TVPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            TVP  P LGG  VPR+C    +  E PCPLDP++ +PD+SK++  QT
Sbjct:   65 TVPCRPGLGGAIVPRSCDHVPQPGEEPCPLDPWIAVPDKSKYVDLQT 111          
BLAST of Gchil4012.t1 vs. uniprot
Match: A0A2J6LM71_LACSA (DNA replication licensing factor MCM5 n=12 Tax=asterids TaxID=71274 RepID=A0A2J6LM71_LACSA)

HSP 1 Score: 60.1 bits (144), Expect = 1.570e-7
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   74 VPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            VP  P LGG  VPR+C    +  ETPCP+DP++V+PD SK++  QT
Sbjct:  185 VPCRPGLGGAIVPRSCDHVAQMGETPCPVDPWIVVPDRSKYVDQQT 230          
BLAST of Gchil4012.t1 vs. uniprot
Match: A0A5N6M305_9ASTR (DNA replication licensing factor MCM5 n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6M305_9ASTR)

HSP 1 Score: 60.1 bits (144), Expect = 1.570e-7
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   74 VPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            VP  P LGG  VPR+C    +  ETPCP+DP++V+PD SK++  QT
Sbjct:  185 VPCRPGLGGAIVPRSCDHVAQIGETPCPIDPWIVVPDRSKYVDQQT 230          
BLAST of Gchil4012.t1 vs. uniprot
Match: A0A5N6LB06_9ASTR (DNA helicase n=1 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6LB06_9ASTR)

HSP 1 Score: 60.1 bits (144), Expect = 1.650e-7
Identity = 24/46 (52.17%), Postives = 32/46 (69.57%), Query Frame = 0
Query:   74 VPVNPELGGFAVPRACRRTVENDETPCPLDPYVVLPDESKFMGSQT 119
            VP  P LGG  VPR+C    +  ETPCP+DP++V+PD SK++  QT
Sbjct:  531 VPCRPGLGGAIVPRSCDHVAQIGETPCPIDPWIVVPDRSKYVDQQT 576          
The following BLAST results are available for this feature:
BLAST of Gchil4012.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IM51_9FLOR2.740e-1769.57DNA replication licensing factor MCM5 n=1 Tax=Grac... [more]
R7QT75_CHOCR3.920e-1371.43DNA replication licensing factor MCM5 n=1 Tax=Chon... [more]
UPI001E1D8AF62.410e-1256.52LOW QUALITY PROTEIN: DNA replication licensing fac... [more]
A0A426YG06_ENSVE1.910e-853.19MCM_OB domain-containing protein n=1 Tax=Ensete ve... [more]
A0A0K9NW09_ZOSMR6.260e-855.32DNA replication licensing factor MCM5 n=1 Tax=Zost... [more]
A0A6P6SUD3_COFAR1.160e-754.35DNA replication licensing factor MCM5 n=4 Tax=Coff... [more]
A0A804NWU2_MAIZE1.360e-751.06DNA replication licensing factor MCM5 n=1 Tax=Zea ... [more]
A0A2J6LM71_LACSA1.570e-752.17DNA replication licensing factor MCM5 n=12 Tax=ast... [more]
A0A5N6M305_9ASTR1.570e-752.17DNA replication licensing factor MCM5 n=2 Tax=Mika... [more]
A0A5N6LB06_9ASTR1.650e-752.17DNA helicase n=1 Tax=Mikania micrantha TaxID=19201... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000081_piloncontigtig00000081_pilon:461044..461535 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil4012.t1Gchil4012.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000081_pilon 461044..461535 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil4012.t1 ID=Gchil4012.t1|Name=Gchil4012.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=164bp
MAHRHRSKSLLDAACFRQPLIGCLSFLFTSALFPPPMCPRYWPRQVLSSP
PQKYAAKVLRWSCAVAIAMRKITVPVNPELGGFAVPRACRRTVENDETPC
PLDPYVVLPDESKFMGSQTQATRVARIRAHRRNAKEHRFELRSLCHGCGQ
VILGVKNDGATSV*
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