Gchil7545.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7545.t1
Unique NameGchil7545.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length119
Homology
BLAST of Gchil7545.t1 vs. uniprot
Match: A0A2V3J2J8_9FLOR (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2J8_9FLOR)

HSP 1 Score: 214 bits (544), Expect = 1.400e-69
Identity = 100/117 (85.47%), Postives = 111/117 (94.87%), Query Frame = 0
Query:    1 MATIDAPVKEDIRTKFNNLLLKTPTATPETESTGVRQKIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEE 117
            M  +DAPVKED+RTK NNLL +TPTATPETEST V+QKIDPGK+YKVLIFNDEMH+KD+VTKVLLKV+PGL+P+AA+AIM KAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEE
Sbjct:   29 MGALDAPVKEDLRTKLNNLLAQTPTATPETESTSVKQKIDPGKFYKVLIFNDEMHTKDYVTKVLLKVVPGLTPEAAYAIMQKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEE 145          
BLAST of Gchil7545.t1 vs. uniprot
Match: A0A7J7IJQ4_9RHOD (ClpS domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IJQ4_9RHOD)

HSP 1 Score: 110 bits (276), Expect = 2.280e-28
Identity = 50/88 (56.82%), Postives = 68/88 (77.27%), Query Frame = 0
Query:   31 ESTGVRQKIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEEA 118
            E T   + +DPGK YK+L+FND++++++ V  VLLK IPGLS   A +IM KAHT GKA+VG+W+FE++E YCD+LR+ GL SDIE A
Sbjct:   96 EKTTATKGVDPGKKYKLLLFNDQVNTRERVVNVLLKCIPGLSKTDAHSIMQKAHTAGKALVGIWVFELAEAYCDLLRSEGLVSDIEPA 183          
BLAST of Gchil7545.t1 vs. uniprot
Match: M2XUB6_GALSU (ATP-dependent Clp protease adaptor protein ClpS n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XUB6_GALSU)

HSP 1 Score: 110 bits (274), Expect = 2.600e-28
Identity = 50/77 (64.94%), Postives = 61/77 (79.22%), Query Frame = 0
Query:   40 DPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIE 116
            DPGK YKVL+FNDE H+K +V + LL+VIPG++ D A  I+  AHT G AVVGVWIFE++E YCD LR+NGL SDIE
Sbjct:   84 DPGKPYKVLLFNDETHTKQYVLETLLRVIPGMTQDQAVGIVETAHTTGSAVVGVWIFELAEAYCDGLRSNGLGSDIE 160          
BLAST of Gchil7545.t1 vs. uniprot
Match: M1VIM3_CYAM1 (ClpS domain-containing protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VIM3_CYAM1)

HSP 1 Score: 108 bits (270), Expect = 1.970e-27
Identity = 51/88 (57.95%), Postives = 67/88 (76.14%), Query Frame = 0
Query:   31 ESTGVRQKIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEEA 118
            E T   + +DPGK YK+L+FNDE ++++ V +VLLK IPGLS   A +IM KAHT G A+VGVW+FE++E YCD+LR+ GL SDIE A
Sbjct:   99 EKTTATKGVDPGKKYKLLLFNDEKNTRERVVEVLLKCIPGLSKLDAQSIMQKAHTTGMALVGVWVFELAEAYCDLLRSEGLVSDIEPA 186          
BLAST of Gchil7545.t1 vs. uniprot
Match: A0A7S0ZF67_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZF67_9RHOD)

HSP 1 Score: 102 bits (253), Expect = 3.460e-25
Identity = 47/91 (51.65%), Postives = 60/91 (65.93%), Query Frame = 0
Query:   28 PETESTGVRQKIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEEA 118
            P  E      K DPGK YKV I+NDE HSK +V   L+++IP ++ D A   M  AH  G A+VGVWIFE++E YCDMLR  G++SDI +A
Sbjct:   69 PVVEEQVKSPKTDPGKMYKVFIYNDEKHSKSYVVSTLMRIIPDMTKDRATQAMEIAHKEGSAMVGVWIFEVAEMYCDMLRTAGIQSDIIQA 159          
BLAST of Gchil7545.t1 vs. uniprot
Match: A0A6U4V643_HEMAN (Hypothetical protein n=2 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4V643_HEMAN)

HSP 1 Score: 100 bits (250), Expect = 2.900e-24
Identity = 43/82 (52.44%), Postives = 64/82 (78.05%), Query Frame = 0
Query:   36 RQKIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEE 117
            R ++DPGK YKVL+FND+ ++++FV   L+KVIPG++ D A  I  +AH NG AVVG+W++E++E Y D+L + GLRS++EE
Sbjct:  120 RPRLDPGKKYKVLLFNDDKNTREFVIDTLIKVIPGMTGDRAKLITAEAHNNGMAVVGIWMYELAEAYSDLLNSAGLRSEVEE 201          
BLAST of Gchil7545.t1 vs. uniprot
Match: A0A7S0G0I4_9RHOD (Hypothetical protein n=3 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0G0I4_9RHOD)

HSP 1 Score: 94.7 bits (234), Expect = 1.270e-22
Identity = 45/100 (45.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:   17 NNLLLKTPTATPETESTGVRQKIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIE 116
            ++ +L+ PT T        + KIDPGK YKV++F +   ++DF+ +VL+K +PG+  + A  I +KA   GKAVVG WIFE++E YCD LR++GL +DI+
Sbjct:   39 SSTVLERPTQTQ-------KGKIDPGKRYKVIVFGENGQTRDFIAQVLMKCLPGMREETAKEIADKAKKAGKAVVGAWIFEMAEAYCDSLRSSGLVADIQ 131          
BLAST of Gchil7545.t1 vs. uniprot
Match: A0A7S0LZ74_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0LZ74_9CRYP)

HSP 1 Score: 94.7 bits (234), Expect = 3.790e-22
Identity = 41/81 (50.62%), Postives = 59/81 (72.84%), Query Frame = 0
Query:   37 QKIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEE 117
            Q+ DPGK YKVL+FNDE ++K+FV + L+K IPG++ + A  +  +AH  G  +VG+W+ E++E Y D+LR  GLRSDI E
Sbjct:   94 QRTDPGKKYKVLLFNDEKNTKEFVIQTLVKFIPGMTAEKAKQVTLEAHQTGTGIVGIWMLELAEAYSDVLRTQGLRSDIAE 174          
BLAST of Gchil7545.t1 vs. uniprot
Match: A0A7S0LQQ1_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LQQ1_9EUKA)

HSP 1 Score: 90.5 bits (223), Expect = 7.610e-21
Identity = 42/96 (43.75%), Postives = 64/96 (66.67%), Query Frame = 0
Query:   22 KTPTATPETESTGVRQKIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEE 117
            K P   P   S    ++ DP K YK+L+FND ++ +++V KVL+  +P L+   A+ +M KAH +G AVVG+W+FE++E YC+ L+  GL S+IEE
Sbjct:   48 KAPIINPGKPSDD--RQSDPAKKYKLLLFNDNVNRREYVAKVLVSNVPELTQADAYVVMQKAHKSGVAVVGIWLFELAEAYCERLKLGGLISNIEE 141          
BLAST of Gchil7545.t1 vs. uniprot
Match: A0A5J4YVI2_PORPP (ATP-dependent Clp protease adapter protein CLPS1, chloroplastic n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YVI2_PORPP)

HSP 1 Score: 90.9 bits (224), Expect = 9.650e-21
Identity = 45/98 (45.92%), Postives = 65/98 (66.33%), Query Frame = 0
Query:   23 TPTATPETESTGVRQ--KIDPGKYYKVLIFNDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISEGYCDMLRNNGLRSDIEEA 118
            T TA  E     V Q  + DPG +YKV++F D+ H K ++ K ++ VIPG++ D+A A + +A   G +VVGVWIFE +E YCD+LR+ GL+ D+ EA
Sbjct:   69 TGTAVLERPVEKVPQTGQTDPGAFYKVILFGDKSHPKQYIVKTVMNVIPGMTFDSATAKVEEALKTGTSVVGVWIFEQAEMYCDLLRSAGLKCDLREA 166          
The following BLAST results are available for this feature:
BLAST of Gchil7545.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J2J8_9FLOR1.400e-6985.47ATP-dependent Clp protease adapter protein CLPS1, ... [more]
A0A7J7IJQ4_9RHOD2.280e-2856.82ClpS domain-containing protein n=1 Tax=Cyanidiococ... [more]
M2XUB6_GALSU2.600e-2864.94ATP-dependent Clp protease adaptor protein ClpS n=... [more]
M1VIM3_CYAM11.970e-2757.95ClpS domain-containing protein n=1 Tax=Cyanidiosch... [more]
A0A7S0ZF67_9RHOD3.460e-2551.65Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A6U4V643_HEMAN2.900e-2452.44Hypothetical protein n=2 Tax=Hemiselmis andersenii... [more]
A0A7S0G0I4_9RHOD1.270e-2245.00Hypothetical protein n=3 Tax=Rhodosorus marinus Ta... [more]
A0A7S0LZ74_9CRYP3.790e-2250.62Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7S0LQQ1_9EUKA7.610e-2143.75Hypothetical protein n=1 Tax=Coccolithus braarudii... [more]
A0A5J4YVI2_PORPP9.650e-2145.92ATP-dependent Clp protease adapter protein CLPS1, ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003769Adaptor protein ClpS, corePFAMPF02617ClpScoord: 43..108
e-value: 1.7E-15
score: 56.5
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeGENE3D3.30.1390.10coord: 22..118
e-value: 2.9E-19
score: 70.6
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 38..116
IPR022935ATP-dependent Clp protease adaptor protein ClpSPANTHERPTHR33473ATP-DEPENDENT CLP PROTEASE ADAPTER PROTEIN CLPS1, CHLOROPLASTICcoord: 25..117
IPR022935ATP-dependent Clp protease adaptor protein ClpSHAMAPMF_00302ClpScoord: 26..118
score: 15.073295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1814464..1814820 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7545.t1Gchil7545.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1814464..1814820 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7545.t1 ID=Gchil7545.t1|Name=Gchil7545.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=119bp
MATIDAPVKEDIRTKFNNLLLKTPTATPETESTGVRQKIDPGKYYKVLIF
NDEMHSKDFVTKVLLKVIPGLSPDAAFAIMNKAHTNGKAVVGVWIFEISE
GYCDMLRNNGLRSDIEEA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003769ClpS_core
IPR014719Ribosomal_L7/12_C/ClpS-like
IPR022935ClpS