Gchil539.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil539.t1
Unique NameGchil539.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length280
Homology
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BLAST of Gchil539.t1 vs. uniprot
Match: A0A2V3IPS0_9FLOR (BZIP domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPS0_9FLOR)

HSP 1 Score: 71.6 bits (174), Expect = 2.290e-11
Identity = 40/73 (54.79%), Postives = 52/73 (71.23%), Query Frame = 0 
Query:  204 VPKSVKGAPAHLRRAIRKRQNSASAQRSRERRKLKVLGFHEVVGTQQRRIDMLEARVRALRGLLEARGRSDGD 276
            +P SVKGAP+HLRRAIR+RQNS SA+RSR+RRK   + F E    Q +RI  LE+RV +L  +L  R ++ GD
Sbjct:   15 IPSSVKGAPSHLRRAIRRRQNSESAKRSRQRRKQAAVMFQERFDEQCQRIRTLESRVYSLHNILRTRQQTQGD 87
The following BLAST results are available for this feature:
BLAST of Gchil539.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IPS0_9FLOR2.290e-1154.79BZIP domain-containing protein n=1 Tax=Gracilariop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 170..234
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 186..201
NoneNo IPR availableCDDcd14686bZIPcoord: 217..268
e-value: 2.30567E-6
score: 41.7621
IPR004827Basic-leucine zipper domainPROSITEPS00036BZIP_BASICcoord: 220..234

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000060_piloncontigtig00000060_pilon:787828..788667 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil539.t1Gchil539.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000060_pilon 787828..788667 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil539.t1 ID=Gchil539.t1|Name=Gchil539.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=280bp
MLRCGRDGLRFLAPCVPPLGPDAMWPDALWPDAPWPDTECAPPPPCRRAA
VGTHASCADAICPELPTAQLSVGELDVPDVAVGELAVGELAVGELAVGGL
AVGGLAAGGLAAGGLAVGGLAVGELAVGELSVAHVASAEPVSAASAGTDL
APRDAMWSASASASASASARSYGSESDAPSADTGVRAITRKQQWQQEQQE
ERLVPKSVKGAPAHLRRAIRKRQNSASAQRSRERRKLKVLGFHEVVGTQQ
RRIDMLEARVRALRGLLEARGRSDGDGDA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004827bZIP