Gchil7520.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7520.t1
Unique NameGchil7520.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length190
Homology
BLAST of Gchil7520.t1 vs. uniprot
Match: A0A2V3J2D0_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2D0_9FLOR)

HSP 1 Score: 230 bits (586), Expect = 4.470e-74
Identity = 119/179 (66.48%), Postives = 147/179 (82.12%), Query Frame = 0
Query:    8 AFLPQPILLPVATRSTRSAICMRRKDSPKKKKSTATSRLSKEEKANLDRIAEEYGIRPPRPGDQLDRKYTQKKPTEQKTLYQSLAGAFGVPTLNAIEQGLYVVLGGLLFFLLTTGLAISSEAFFKASGKPIPDSLDAFATNVQNLFSPALLSFLVLSSLFGIFKQSQLESGTSSYSSLK 186
            AF+P  +L    +++ RS +CM+++ +PKKKK  A SRLSKEEKA +D+IAE YG++PP+PGDQLDRKYT+ KP E KT+YQSLAGA GV TLN +EQGLYV LGGLL FL+T GL ISSEAF+KA+GK IP+SLDAF + VQ  F+PAL+ FLVLSS+ GI+KQSQLESG SSYSSL+
Sbjct:    8 AFVPARVLPTTRSKTLRSCLCMKKRGAPKKKKPNAISRLSKEEKARIDKIAERYGVQPPKPGDQLDRKYTKVKPEEPKTMYQSLAGAVGVETLNLVEQGLYVALGGLLTFLITCGLLISSEAFYKATGKDIPESLDAFTSMVQGYFTPALVIFLVLSSVLGIYKQSQLESGASSYSSLR 186          
BLAST of Gchil7520.t1 vs. uniprot
Match: R7QM47_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QM47_CHOCR)

HSP 1 Score: 154 bits (390), Expect = 2.510e-44
Identity = 96/191 (50.26%), Postives = 124/191 (64.92%), Query Frame = 0
Query:    8 AFLPQPILLPVATRST-RSAICMR---RKDSPKKKKSTATSRLSKEEKANLDRIAEEYGIRPPRPGDQLDRKYTQKKPTEQK-----TLYQSLAGAFGVPTLNAIEQGLYVVLGGLLFFLLTTGLAISSEAFFKASGKPIPDSLDAFATNVQNLFSPALLSFLVLSSLFGIFKQSQLESGTSSYSSLKEKE 189
            AF    +LLP   R T R  + MR   RK  PKK      S+LSKE +  ++ +A +YGIR PRPGD LDRK+     ++ +     + YQ LAGAFGV  LNA E+ L V LG +L   L +GLAISSEAFFKASGK IPD+++A   +++  F+P LL FL LSS+FG++KQSQL SG SSYS+L + E
Sbjct:    8 AFCGPALLLPTGQRRTARVCVTMRKGKRKPGPKK------SQLSKESEERIEGLASKYGIRAPRPGDDLDRKFNSTSSSDPENQPPPSAYQRLAGAFGVEALNAAERVLVVALGTMLIAFLASGLAISSEAFFKASGKEIPDNVEAVLLSLEQAFTPTLLIFLALSSVFGLYKQSQLSSGASSYSALSKDE 192          
BLAST of Gchil7520.t1 vs. uniprot
Match: A0A7S0ZH70_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S0ZH70_9RHOD)

HSP 1 Score: 89.4 bits (220), Expect = 2.110e-18
Identity = 50/145 (34.48%), Postives = 90/145 (62.07%), Query Frame = 0
Query:   38 KKSTATSRLSKEEKANLDRIAEEYGIRPPR---PGDQLDRKYTQKKPTEQ--KTLYQSLAGAFGVPTLNAIEQGLYVVLGGLLFFLLTTGLAISSEAFFKASGKPIPDSLDAFATNVQNLFSPALLSFLVLSSLFGIFKQSQLES 177
            KK TA  R  KE+  +LD++   YG+  P       ++D+K  +++  E+  ++ Y+ +    G  TL  IE  +   L GL+F  +++G+AIS+EA+FK+  KP+PD++D     ++ + +P+++ FL+LSS++G++K  QLES
Sbjct:   97 KKLTAEER--KEKNKDLDKVLARYGVELPSNVTQAQRMDKKLREERAEEETKRSPYEFIVDTLGFETLARIESVIQAALFGLMFVWISSGVAISTEAYFKSQKKPVPDNIDKIVQQLEAVLTPSVVMFLILSSVYGLYKLVQLES 239          
BLAST of Gchil7520.t1 vs. uniprot
Match: A0A5J4Z4F8_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z4F8_PORPP)

HSP 1 Score: 77.4 bits (189), Expect = 5.800e-14
Identity = 46/140 (32.86%), Postives = 84/140 (60.00%), Query Frame = 0
Query:   46 LSKEEKANLDRIAEEYGIRPPRP-GDQLDRKYTQKKPTEQKTL-------YQSLAGAFGVPTLNAIEQGLYVVLGGLLFFLLTTGLAISSEAFFKASGKPIPDSLDAFATNVQNLFSPALLSFLVLSSLFGIFKQSQLES 177
            + K++  +LD++   +G+  P+    ++D +  Q++  EQKTL       Y+ L   +    L   E+GL V L GL+ F +  GL I++EA++K   + +P S+  F    ++LF+P+++ FL+LSSL+G++K +Q+ES
Sbjct:  104 MKKKKDKDLDKVLRGFGLENPKTQAMRMDARLAQER-EEQKTLTERTVNLYKILKEKYSQEQLVKAERGLQVALLGLMLFWIGDGLIITTEAYYKVRQQDVPQSIIGFVATFESLFTPSVVLFLLLSSLYGLYKVNQIES 242          
The following BLAST results are available for this feature:
BLAST of Gchil7520.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A2V3J2D0_9FLOR4.470e-7466.48Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QM47_CHOCR2.510e-4450.26Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S0ZH70_9RHOD2.110e-1834.48Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A5J4Z4F8_PORPP5.800e-1432.86Uncharacterized protein n=1 Tax=Porphyridium purpu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 29..79
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 39..79
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 152..170
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..25
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 171..189
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..131
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..151
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..25
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 26..106
NoneNo IPR availableTMHMMTMhelixcoord: 109..131
NoneNo IPR availableTMHMMTMhelixcoord: 151..170

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1701416..1701985 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7520.t1Gchil7520.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1701416..1701985 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7520.t1 ID=Gchil7520.t1|Name=Gchil7520.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=190bp
MPMASLPAFLPQPILLPVATRSTRSAICMRRKDSPKKKKSTATSRLSKEE
KANLDRIAEEYGIRPPRPGDQLDRKYTQKKPTEQKTLYQSLAGAFGVPTL
NAIEQGLYVVLGGLLFFLLTTGLAISSEAFFKASGKPIPDSLDAFATNVQ
NLFSPALLSFLVLSSLFGIFKQSQLESGTSSYSSLKEKE*
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