Gchil7367.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7367.t1
Unique NameGchil7367.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length326
Homology
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BLAST of Gchil7367.t1 vs. uniprot
Match: A0A2V3J5Q1_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J5Q1_9FLOR)

HSP 1 Score: 129 bits (324), Expect = 3.930e-32
Identity = 109/253 (43.08%), Postives = 135/253 (53.36%), Query Frame = 0 
Query:   84 MSFRKTQ--------PAPPPPQPQLSDKLSSLASKFGAIVDPSAPIPLRSPRKFAPPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSQVSQQ-FSTAAAAFRDRENTLAA--EQRVAGMARGLDQRVDKPDSKRVASVARVFESSASAGRYQAPLKRDATTSRTAPSSPRAPVREPPLPAKEHRAPLLDDREEHEAPRAFGRAKSVQDTAKMFERGVTANSSDTHPDHTNARQLSADHTHRFKDAAKKFGAS 325
            MSF + Q        P P   +  +S+K+SS+A+KFGAIVDP+APIPLRSPRK +                                S  S   FS AAAAFR RE  +    E RV GMAR LD    K + +RVA+VAR FESSA A R  AP+      +    S P   VRE P+  +   AP+ +  +E    RAFGRAKSVQDTA+MFERGV   S+DT P   N  Q + +   RF+DAAK+F AS
Sbjct:    1 MSFNRVQSLRSTYDTPKPKDEEAAVSEKVSSIATKFGAIVDPTAPIPLRSPRKISRIQSEKYTPVKPSVDEQQHQSVQSLASRFAETSNKSSAPFSDAAAAFRAREEAMKRPEESRVVGMARSLDDGAKK-EVQRVANVARAFESSAVAQRLDAPVSPPLFANIHQKSEP---VREAPV-KEATTAPVREGDDEQMRTRAFGRAKSVQDTARMFERGV---SNDTKPVE-NGVQEAGEAKLRFQDAAKRFEAS 244
The following BLAST results are available for this feature:
BLAST of Gchil7367.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J5Q1_9FLOR3.930e-3243.08Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..168
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 249..274
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 124..140
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 303..320
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 222..325
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 287..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 59..79
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 80..325
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 30..53
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 54..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..29
NoneNo IPR availableTMHMMTMhelixcoord: 31..53
NoneNo IPR availableTMHMMTMhelixcoord: 57..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:711297..712274 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7367.t1Gchil7367.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 711297..712274 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7367.t1 ID=Gchil7367.t1|Name=Gchil7367.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=326bp
MRVAYAPLFVSCNNSYRVLSRTSVACAHRALAFSVIFSVAFSVAFSVIFS
VAFSVAFSVAFSVIFSVSVAFSVAFSVAFSPLAMSFRKTQPAPPPPQPQL
SDKLSSLASKFGAIVDPSAPIPLRSPRKFAPPPRPTPPADAAPHSVHSLA
SRFAADAPPSDPSQVSQQFSTAAAAFRDRENTLAAEQRVAGMARGLDQRV
DKPDSKRVASVARVFESSASAGRYQAPLKRDATTSRTAPSSPRAPVREPP
LPAKEHRAPLLDDREEHEAPRAFGRAKSVQDTAKMFERGVTANSSDTHPD
HTNARQLSADHTHRFKDAAKKFGAS*
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