Gchil7747.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7747.t1
Unique NameGchil7747.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length497
Homology
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QN04_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QN04_CHOCR)

HSP 1 Score: 261 bits (666), Expect = 5.490e-75
Identity = 197/663 (29.71%), Postives = 273/663 (41.18%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSNQNGTGEHLEGCWDLPEEGALRNTDIPTQILALEETNIMPVTREEFLREQAQDAYCRTLADQIGSKGSSFDVD--------------------------------------HNG---MYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYGASL-------------------------------------------------------------------------------------------------------------------------------LRRAVKRAESRLTAAQKRYKADYDRRVPKVVSVSSGHYVYIDKPPSGKRPRPVDEADDEAIDR------DINSKLLHKSVGHYKVLNASDHTVRVEQDGIPNTISIDRITVAAETVQHRMEAGTSAQEPRAVALRTRPSKDPTLIEVNDELRRDDPDNNPLTGTEMEPHTVTAGAPDPAPTNKAPNSEHMNPRGGVPPKDQDKTSEEFSVDRLVGNTRTYNGPKYTVRWYCWGPKGDYLKPPVAIPPHFRIRYWRRRKE 490
            LRL+E++Y+VQYRPG+KH +AD +SRL + G +TEPVDD++PCF V        ++ EG      E  L N                     EFLREQA+DA+CR  A+ +G+  S FD+D                                      H+G   MY TL++ +YWPHMA D  + VR C SC   RG + K++K LKLFPA GPLEFVA+DLLG LPKT +G QH+LVITD FSKLTR+IP + T ++ +A AFL+NWVY YGA                                                                                                                                 LR A+ RA ++L+A+QKRYK D+D++V     V +G +VY+D+P     PRP+   +     +      +++ KLL K+ G ++V +A+D TV +EQDG+ N +SIDR+T        +M  G                                              TV +  P       A +++   PR             E+ VDR+VG+  T  G +Y VRWY +    D  +P   +P  F  RYWR R+E
Sbjct:  227 LRLAEYDYEVQYRPGVKHQLADGVSRLRTDGGDTEPVDDEVPCFAV--------QYEEG-----SEALLDN---------------------EFLREQAEDAFCRFAAETVGTPNSKFDIDRYGFLVRTSPLDGTLQRVVPTRLRPRVLYLAHHPRLAGHSGATRMYYTLRREYYWPHMASDALSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYVQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPGTVPQDAGTHREDPRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRP-----PRPLTSVERRTRAQGTTGTDELSVKLLPKTEGPFRVRSATDTTVLIEQDGVENRVSIDRVT--------KMPRGPG-------------------------------------------DTVASAIPS------ASDAQTTTPRA------------EYVVDRIVGHRMTRGGIEYKVRWYGYAASDDTYEPSEGLPQPFIDRYWRTRQE 781          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QLF2_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QLF2_CHOCR)

HSP 1 Score: 225 bits (573), Expect = 2.580e-61
Identity = 117/275 (42.55%), Postives = 157/275 (57.09%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSNQNGTGEHLEGCWDLPEEGALRNTDIPTQILALEETNIMPVTREEFLREQAQDAYCRTLADQIGSKGSSFDVDHNG-----------------------------------------MYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYGA 235
            LRL+E+ Y+VQYRPG+KH +AD +SRL + G +T PVDD++ CF V S +       +  WDL ++   R        +  EE ++  ++   FLREQA DA+CR  AD +G   S FDVD  G                                         MY TL++ +YWPH+A D +  VR C S    RG + K++K L+LFPA GP+EFVA+DLLG LPKT +G QH+LVITD FSKLT +IP + T ++ +A AFL+NWVY YGA
Sbjct:  292 LRLAEYNYEVQYRPGVKHQLADGVSRLRTDGGDTTPVDDEVSCFVVQSQEGSASLLGKVHWDLTQD---RPDGFYVLAVTPEERDVSSISVANFLREQADDAFCRAAADTVGEPNSKFDVDRYGFLVRKSPLDGTLQRVVPNRLRPRVLYLAHHPRLAGHPGGTRMYYTLRREYYWPHLASDAFATVRNCTSWAATRGTLFKNQKDLRLFPAAGPMEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTHSIPLRTTTASVVASAFLDNWVYVYGA 563          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QMC5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMC5_CHOCR)

HSP 1 Score: 204 bits (520), Expect = 3.920e-54
Identity = 113/275 (41.09%), Postives = 144/275 (52.36%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSNQNGTGEHLEGCWDLPEEGALRNTDIPTQILALEETNIMPVTREEFLREQAQDAYCRTLADQIGSKGSSFDVDHNG-----------------------------------------MYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYGA 235
            LRL+E++Y+VQYRPG+KH +AD +SRL   G +TEPVDD                                                    EEFLREQA+DA+CR  A+ +G+  S FD+D  G                                         MY TL++ +YWPHMA D ++ VR C SC   RG + K++K LKLFPA GPLEFVA+DLLG LPKT +G QH+LVITD FSKLTR+IP + T ++ +A AFL+NWVY YGA
Sbjct:  442 LRLAEYDYEVQYRPGVKHQLADGVSRLRIDGGDTEPVDD----------------------------------------------------EEFLREQAEDAFCRFAAETVGTPNSKFDIDRYGFLVRTSPLGGTLQRVVPTRLRPRVLYLTHHPRLAGHPGATRMYYTLRREYYWPHMASDAFSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGA 664          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QKK5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QKK5_CHOCR)

HSP 1 Score: 200 bits (509), Expect = 5.430e-53
Identity = 110/248 (44.35%), Postives = 150/248 (60.48%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSNQNGTG-----------EHLEGCWDL---PEEGALRNTDIPTQILALEETNIMPVTREEFLREQAQDAYCRTLADQIGSKGSSFDVDHNGMYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYGA 235
            LRL+E++Y+VQYRPG+KH +AD  SRL +   +TEPVDD++PCF V  ++               +  +GC  L   PEE     + +   +  +  T + P  R  +L      A+   LA   G+           MY T+++ +YWPHMA D ++ VR C SC   RG + K++K LKLFPA GPLEFVA+DLLG LPKT +G QH+LVITD FSKLTR+IP + T ++ +A AFL+NWVY YGA
Sbjct:  361 LRLAEYDYEVQYRPGVKHQLADGESRLRTDREDTEPVDDEVPCFAVQYDEGSEALLDNVHWDPPQDRPDGCHALAITPEERDAATSPLDGTLQRVVPTRLRP--RVLYL------AHHPRLAGHPGA---------TRMYYTIRREYYWPHMASDAFSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLEFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGA 591          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7Q4X3_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q4X3_CHOCR)

HSP 1 Score: 183 bits (464), Expect = 1.710e-48
Identity = 138/480 (28.75%), Postives = 192/480 (40.00%), Query Frame = 0
Query:  126 MYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYGASL--------------------------------------------------------------------------------------------------------------------LRRAVKRAESRLTAAQKRYKADYDRRVPKVVSVSSGHYVYIDKPPSGKRPRPVDEADDEAIDRDINSKLLHKSVGHYKVLNASDHTVRVEQDGIPNTISIDRITVAAETVQHRMEAGTSAQEPRAVALRTRPSKDPTLIEVNDELRRDDPDNNPLTGTEMEPHTVTAGAPDPAPTNKAPNSEHMNPRGGVPPKDQDKTSEEFSVDRLVGNTRTYNGPKYTVRWYCWGPKGDYLKPPVAIPPHFRIRYWRRRK 489
            MY TL++ +YWPHMA D ++ VR C SC   RG + K++K LKLFPA GPL+FVA+DLLG LPKT +G QH+LVITD FSKLTR+IP + T ++ +A AFL+NWVY YGA                                                                                                                      LR A+ RA ++L+A+QKRYK D+D++V     V +G +VY+D+P     PRP+   +          +      G ++V +A+D TV +EQDG+ N +SIDR+T        +M  G                                              TV +  P       A +++   PR             E+ VDR+VG+  T  G +Y VRWY +    D  +P   +P  F  RYWR R+
Sbjct:   70 MYYTLRREYYWPHMASDAFSTVRNCTSCAATRGTLVKNQKDLKLFPAAGPLQFVAMDLLGPLPKTAHGNQHVLVITDRFSKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYVLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQSNGQTERFNRTLVQRLRHYVEEHQRDWDDYLQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLILPEDPRTPVQYKRATLRKLRDALDRARTKLSASQKRYKDDFDKKVRFRPVVVAGDFVYVDRP-----PRPLTSVE----------RRTRAQEGPFRVRSATDTTVLIEQDGVENRVSIDRVT--------KMPRGPG-------------------------------------------DTVASAIPS------ASDAQTTTPRA------------EYVVDRIVGHRMTRGGTEYKVRWYGYAASDDTYEPSEGLPQPFIDRYWRTRQ 465          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QU32_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QU32_CHOCR)

HSP 1 Score: 178 bits (452), Expect = 2.430e-47
Identity = 103/227 (45.37%), Postives = 138/227 (60.79%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSNQNGTGEHLEGC-WDLPEEGALRNTDIPTQILAL--EETNIMPVTREEFLREQA------QDAYCRTLADQIGSKGSSFD-----VDHNG---MYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAI 211
            LRL+E+ YDVQYR G+KH +AD +SRL     ET  VDD+ PCF V  ++        G  W  P E +  NT    Q LA+  E+T++  ++ EEF++ QA           R +  ++G+K            H G   MYDTL++ +YWPHMA++VY+ VR C+SC   R  I +H+K +KLFPA GPLEFVA+DLLG LPKT +G Q +LVITD FSKLT +I
Sbjct:   53 LRLAEYNYDVQYRLGVKHQLADGVSRLRMDKGETAGVDDEFPCFVVQVSRQDPNVGPVGIEWAPPTERSPENTRERPQALAVTPEQTDVSSLSVEEFIQPQAVHQSPLDGTLQRVVPKRLGAKVLYLAHPPRLARHPGGTRMYDTLRREYYWPHMANNVYSTVRNCQSCSATRSTIVRHQKDIKLFPAAGPLEFVAMDLLGPLPKTAHGNQFVLVITDLFSKLTCSI 279          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QR94_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QR94_CHOCR)

HSP 1 Score: 185 bits (470), Expect = 2.590e-47
Identity = 99/274 (36.13%), Postives = 141/274 (51.46%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSNQNGTGEHLEGCWDLPEEGALRNTDIPTQILALEETNIMPVTREEFLREQAQDAYCRTLADQIGSKGSSFDVDHNG-----------------------------------------MYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYG 234
            LRLSE+++ V++R GIKH  ADA+ RL ++GL+T  + D+IPC+                                         I+PV +++ +REQ  D+YC+ + +++G  G+ F+V+ +G                                         MY+T+++ +YWPHMA DV   V  C SC R RG     +K L LFPA GPLEFVA+DL G LPKT +G +H LVITD F+KL RAIP + T++  +A  FL+ WVYPYG
Sbjct:  248 LRLSEYDFIVEHRAGIKHQAADALWRLETTGLDTSTLRDEIPCY-----------------------------------------ILPVMQDDLIREQKTDSYCKAMMEEVGKSGTQFEVNQHGLLCRRAPLDGSIQIVVPASLRARISFLSHYPRLQGHPGTSKMYETMRRLYYWPHMASDVQQTVADCRSCARVRGTQYSQQKKLTLFPAAGPLEFVAMDLYGPLPKTPHGNRHKLVITDRFTKLCRAIPLRTTQAQQVAQTFLDAWVYPYG 480          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QJ93_CHOCR (Integrase catalytic domain-containing protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QJ93_CHOCR)

HSP 1 Score: 167 bits (422), Expect = 2.020e-41
Identity = 140/515 (27.18%), Postives = 201/515 (39.03%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCF---WVSSNQNGTGEHLEGCWDLP-EEGALRN--TDIPTQILALEETNIMPVTREEFLREQAQDAYCRTLADQIGSKGSSFDVDHNG-----------------------------------------MYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYGASL-------------------------------------------------------------------------------------------------------------------------------LRRAVKRAESRLTAAQKRYKADYDRRVPKVVSVSSGHYVYIDKPPSGKRPRPVDEADD-EAIDRDINSKLLHKSVGHYKVLNASDHTVRVEQDGIPNTISIDRIT 341
            LRL+E++Y+V+YRPGIKH +AD +SRL   G  +EPVDD++PCF   W    QN     +   W+ P + G   +  T IP      EE ++  VT EEFLREQA+D +C   A+ +G+  S +DV+  G                                         MY TL++ +YWPHMA+D ++                                            T +G +H+LV+TD F+KLTR+IP + T ++ +A AFL+NWVY YGA                                                                                                                                 LR A++R   +LTAAQ+RYKAD+D++V     +  G  VY+D+PP   RP    E  D  + D   + KLL K+ G ++V +A++ TV V+QDG+ N +SIDRIT
Sbjct:  158 LRLAEYDYEVKYRPGIKHQLADGVSRLRVDGATSEPVDDEVPCFAVQWREEEQNPRQGTVH--WETPVDPGRAEHAFTVIP------EERDVSSVTVEEFLREQAEDPFCTAAAETVGNPDSRYDVERYGFVVRKSPLDGTLQRVVPKRLRAKILYLAHHPRLAGHPGGTRMYYTLRREYYWPHMANDAFS-------------------------------------------TTAHGNRHVLVMTDRFTKLTRSIPLRTTTASVVANAFLDNWVYVYGAPRYMLTDNGPQFAAKFFDAVCALLGVRHYLTTAYHPQTNGQTERFNRTLVQRLRHYVAEHQRDWDEYIQPLTFAYNTQVHRSTETTPFDLVLTRPPSGLALPGTVPQDAVSNTEDPRTPVQYKRATLRKLRDALERTRVKLTAAQRRYKADFDKKVRFRSVIQVGDLVYVDRPP---RPLTSTERGDLPSNDGGPSVKLLPKTEGPFRVRSATETTVVVDQDGVSNRVSIDRIT 618          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QNI8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QNI8_CHOCR)

HSP 1 Score: 167 bits (422), Expect = 9.850e-41
Identity = 92/244 (37.70%), Postives = 145/244 (59.43%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSNQNGTGEHLEGCWDLPEEGALRN------TDIPTQILALEETNIMPVTREEFLREQAQDAYCRTLADQI----GSKGSSFDVDHNGMYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYGA 235
            LRL+E++ DV Y  GIK+ +ADA+SR+ S+G  T P+D++IPC+ V  N +   +H E  +D  +E   R        ++      + +  +  V R+  L    Q     TL +++        +S  +    ++ TL++RFYWP M+ D Y+ VR C  C + R  +RKH   LK FP +GPLE++AID+LG+LP+T  G +++LV+TD +SKLTR +P K   + T+A AF+++WV+ YGA
Sbjct:  226 LRLAEYDSDVTYVKGIKNCLADALSRIPSTGGTTVPIDEEIPCYSVM-NFDDEPQHHEETYDPTDEVTSRLEKGEGFAELRRSRFFVNQERL--VCRKAHLDGVEQIVVPTTLRERLLYLSHYPATSGHLGGRRLFYTLRQRFYWPSMSVDSYSTVRMCPDCAKARINLRKHNSELKTFPPSGPLEYIAIDILGELPRTPRGNRYLLVMTDRYSKLTRTVPLKRITAETVAQAFISHWVFVYGA 466          
BLAST of Gchil7747.t1 vs. uniprot
Match: R7QG36_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QG36_CHOCR)

HSP 1 Score: 166 bits (421), Expect = 1.120e-40
Identity = 92/255 (36.08%), Postives = 143/255 (56.08%), Query Frame = 0
Query:    2 LRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSNQNGTGEHLEGCWDLPEEGALRNTDIPTQILALEETNIMPVTREEFLREQAQDAYCRTLADQIGS------------KGSSFDVDHNG----------MYDTLKKRFYWPHMAHDVYNFVRQCESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVITDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYG 234
            LRLSEF+++++Y+ G  ++ ADA+SRL ++G   + +DD+IPCF ++    GT E+ E    + +  AL     P ++          VT EE +REQA D +C  + ++I +            K     + H            +Y TL++ FYW  MA D Y   + C +C R R  +RK+ K +KLF +  PLEF AID+LG+L  TK G ++ILVI+D +SKL R +P K+  +  +A AF+++WV+ YG
Sbjct:  239 LRLSEFDFEIKYKKGKGNSQADALSRLRTAGETVDEIDDEIPCF-MAEPAEGTVENEESFDAIDDILALEGGTAPDRL-----DQFQAVTPEELIREQAVDPFCNRIKEEIDAGKFVQLVIPQSLKDRVLGLSHYAKLAGHPGGRKLYKTLRRYFYWSTMALDCYAVAKNCAACARERVKLRKNTKEMKLFTSKAPLEFAAIDILGELITTKRGNRYILVISDRYSKLVRTVPLKKISAAHIAQAFVHHWVFVYG 487          
The following BLAST results are available for this feature:
BLAST of Gchil7747.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R7QN04_CHOCR5.490e-7529.71Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QLF2_CHOCR2.580e-6142.55Integrase catalytic domain-containing protein n=1 ... [more]
R7QMC5_CHOCR3.920e-5441.09Integrase catalytic domain-containing protein n=1 ... [more]
R7QKK5_CHOCR5.430e-5344.35Integrase catalytic domain-containing protein n=1 ... [more]
R7Q4X3_CHOCR1.710e-4828.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QU32_CHOCR2.430e-4745.37Integrase catalytic domain-containing protein n=1 ... [more]
R7QR94_CHOCR2.590e-4736.13Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QJ93_CHOCR2.020e-4127.18Integrase catalytic domain-containing protein n=3 ... [more]
R7QNI8_CHOCR9.850e-4137.70Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QG36_CHOCR1.120e-4036.08Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 235..255
NoneNo IPR availableGENE3D1.10.340.70coord: 117..155
e-value: 7.1E-8
score: 34.6
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 373..391
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 350..441
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 426..440
NoneNo IPR availablePANTHERPTHR24559:SF381ZGC:113436coord: 130..234
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 130..234
IPR036397Ribonuclease H superfamilyGENE3D3.30.420.10coord: 169..243
e-value: 2.1E-8
score: 35.7
IPR041588Integrase zinc-binding domainPFAMPF17921Integrase_H2C2coord: 125..156
e-value: 3.1E-9
score: 36.7
IPR012337Ribonuclease H-like superfamilySUPERFAMILY53098Ribonuclease H-likecoord: 169..235

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:889062..891047 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7747.t1Gchil7747.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 889062..891047 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7747.t1 ID=Gchil7747.t1|Name=Gchil7747.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=497bp
MLRLSEFEYDVQYRPGIKHNIADAISRLNSSGLETEPVDDDIPCFWVSSN
QNGTGEHLEGCWDLPEEGALRNTDIPTQILALEETNIMPVTREEFLREQA
QDAYCRTLADQIGSKGSSFDVDHNGMYDTLKKRFYWPHMAHDVYNFVRQC
ESCVRFRGGIRKHRKYLKLFPATGPLEFVAIDLLGQLPKTKNGYQHILVI
TDGFSKLTRAIPFKETKSTTLAIAFLNNWVYPYGASLLRRAVKRAESRLT
AAQKRYKADYDRRVPKVVSVSSGHYVYIDKPPSGKRPRPVDEADDEAIDR
DINSKLLHKSVGHYKVLNASDHTVRVEQDGIPNTISIDRITVAAETVQHR
MEAGTSAQEPRAVALRTRPSKDPTLIEVNDELRRDDPDNNPLTGTEMEPH
TVTAGAPDPAPTNKAPNSEHMNPRGGVPPKDQDKTSEEFSVDRLVGNTRT
YNGPKYTVRWYCWGPKGDYLKPPVAIPPHFRIRYWRRRKEPMPADG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036397RNaseH_sf
IPR041588Integrase_H2C2
IPR012337RNaseH-like_sf