Gchil7693.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7693.t1
Unique Name	Gchil7693.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	207

Homology

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BLAST of Gchil7693.t1 vs. uniprot
Match: A0A2V3ITE0_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITE0_9FLOR)

HSP 1 Score: 183 bits (464), Expect = 1.180e-51
Identity = 111/236 (47.03%), Postives = 150/236 (63.56%), Query Frame = 0

Query:    1 MSGVSIAPLAAVFVVGALMYRSCAIFPDLGKALALSAYESSNHDGNIMSSMISFESSRYVED--SPRRQMWKSASEHSNAAVEMEQEAAAAVRGQFATVLKPGAARVRPPDVMTRLTILGICMSLEQ----------------------------EASSSKEKFNSEVGMEHVQQARRGTAIIEKIMVDLSFVFDASGAPSWRNFRRMREILCTQGGVIDNVQKQVHEGSTVGFLE 206
            MSG+++A LA V VVGA++Y+SCAIFP  GK+L  S   SS +DG ++SS  + +S  Y +D  SP  Q+W+SASE   + VEM QE AA+V GQFA +L+PGAARVRPP V+TRL I G+CM+L Q                             +SSS+E  ++ + ME V    R      K  +DL FVFDASGA SWR++R+++EIL + GG+IDNVQ +VH+GS +GF+E
Sbjct:    1 MSGIALASLAVVVVVGAVVYKSCAIFPTGGKSLNPSTSGSSGNDGGLLSS--NGDSGFYHDDDESPWGQVWRSASELPESIVEMGQEVAASVGGQFAGLLRPGAARVRPPQVITRLAIPGMCMALSQLSPDSIESDAMSSNSGQSSEPPSFRSSRVSSSSQEHSSAVMRMETVSDKTRRNLAAYKPRLDLLFVFDASGAMSWRDYRKLKEILSSPGGIIDNVQSRVHDGSRIGFVE 234

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BLAST of Gchil7693.t1 vs. uniprot
Match: R7QCF8_CHOCR (VWFA domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCF8_CHOCR)

HSP 1 Score: 142 bits (358), Expect = 1.480e-35
Identity = 90/232 (38.79%), Postives = 129/232 (55.60%), Query Frame = 0

Query:    1 MSGVSIAPLAAVFVVGALMYRSCAIFPDLGKALALSAYESSNHDGNIMSSMISFESSRYVED-SPRRQMWKSASEHSNAAVEMEQEAAAAVRGQFATVLKPGAARVRPPDVMTRLTILGICMSLEQ----------EASSSKEKFNSEVGMEHVQQARRGT---------------AIIEKIMVDLSFVFDASGAPSWRNFRRMREILCTQGGVIDNVQKQVHEGSTVGFLE 206
            MSG++IA    +  VGA++Y++CA+ P +G A  +++   S+ D N  S   S    R ++D SP  Q+WKSASE     V   +  AA V GQFA + KPGAARVRPP V+TRL + G+CM+L Q           A+SS+ +           +A  GT                 ++   VDL FVFDASG+ SWR +R+M+E+L   GG++D++  + H GS VGF+E
Sbjct:  648 MSGIAIASFIVMLTVGAVVYKTCAVVPGVG-AFGITSLFGSSDDDNEKSGYTSEREERDLDDDSPWDQVWKSASELPEMVVAAGEAVAAKVGGQFAGLFKPGAARVRPPQVITRLAVPGMCMALSQLPGSDMMASASANSSELRSFKSSRFPSSHEATSGTKSGSPSENGVGSLKTGCLDGPKVDLLFVFDASGSLSWREYRQMKEVLTKPGGLLDDLMSKTHSGSRVGFVE 878

The following BLAST results are available for this feature:

BLAST of Gchil7693.t1 vs. uniprot

BLAST of Gchil7693.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3ITE0_9FLOR	1.180e-51	47.03	VWFA domain-containing protein n=1 Tax=Gracilariop...	[more]
R7QCF8_CHOCR	1.480e-35	38.79	VWFA domain-containing protein n=1 Tax=Chondrus cr...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..206
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..19
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00025321_pilon	contig	tig00025321_pilon:283695..284397 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7693.t1	Gchil7693.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00025321_pilon 283695..284397 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7693.t1 ID=Gchil7693.t1|Name=Gchil7693.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=207bp
MSGVSIAPLAAVFVVGALMYRSCAIFPDLGKALALSAYESSNHDGNIMSS
MISFESSRYVEDSPRRQMWKSASEHSNAAVEMEQEAAAAVRGQFATVLKP
GAARVRPPDVMTRLTILGICMSLEQEASSSKEKFNSEVGMEHVQQARRGT
AIIEKIMVDLSFVFDASGAPSWRNFRRMREILCTQGGVIDNVQKQVHEGS
TVGFLE*