Gchil7753.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7753.t1
Unique NameGchil7753.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length419
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:902943..904199 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7753Gchil7753Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 902943..904199 -


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7753.t1.stop1Gchil7753.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 902943..902945 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7753.t1.CDS1Gchil7753.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 902943..904199 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7753.t1.exon1Gchil7753.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 902943..904199 -


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7753.t1.start1Gchil7753.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 904197..904199 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7753.t1Gchil7753.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 902943..904199 -


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7753.t1 ID=Gchil7753.t1|Name=Gchil7753.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=419bp
MSNRVSWNEMHEPDVHLPQSLGFFFCWHPVEFHDMSAEKRLPLYLSLSQE
DEIQWAMYWRVSPLLLVATPSMVAYHSSQPMGDDNDRRSWLSWQVLFVEF
GVMSLMAFLDTAKYVIRGNVCSEDWRVWYDENIPGPRGRLILLPDIMIRF
LRNLGIQWTQFGVEETEPLLDHVLEVEWGKIPRILRYDWDTDSFKPIPRH
PQGRDDARAYPAKPLRNQKSDISRLHVPDYYPKAISFDPLCFEPDVEATL
FAPAGMSDGEVFGEYPFDLLVDCVNPPVESAVVLPTAYPPTAPPGPAPQD
ELSYGPPVAQVDIPPGEVTVEAESPVGDALVQTSTGGVDIAPSSPFPHFP
ASVTAAASDLRHVYRTVGITTMMDITTVLREACSWAPRSERYATVVQQGQ
DLKTAMVNLLQQNAQVMS*
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spliced messenger RNA

>Gchil7753.t1 ID=Gchil7753.t1|Name=Gchil7753.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1257bp|location=Sequence derived from alignment at tig00025321_pilon:902943..904199- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGTCCAACCGGGTCTCTTGGAACGAGATGCACGAGCCTGATGTTCATCT
GCCTCAATCCCTGGGGTTCTTCTTTTGTTGGCATCCAGTGGAGTTTCACG
ACATGAGCGCCGAAAAACGCCTTCCGTTGTACCTCTCGCTTTCCCAAGAG
GATGAGATCCAATGGGCCATGTATTGGCGTGTCTCGCCGCTCCTTCTGGT
TGCCACGCCGTCCATGGTGGCGTACCACTCGTCCCAACCCATGGGCGACG
ACAATGACCGAAGGTCGTGGCTGTCCTGGCAGGTACTCTTCGTTGAGTTC
GGCGTGATGTCCCTTATGGCCTTTCTGGATACCGCGAAGTACGTAATCCG
TGGTAATGTCTGTTCGGAGGATTGGAGGGTATGGTACGATGAGAACATAC
CAGGTCCTCGAGGTCGCCTAATCCTACTCCCAGACATCATGATCCGTTTC
CTAAGGAACCTGGGCATCCAGTGGACCCAGTTCGGCGTCGAGGAGACCGA
ACCCCTCTTGGATCATGTACTAGAGGTGGAGTGGGGCAAGATTCCTAGGA
TCCTTCGGTATGACTGGGATACCGACTCATTCAAACCGATTCCGCGGCAT
CCGCAGGGTCGGGACGACGCTCGTGCCTATCCCGCCAAGCCTTTGAGAAA
TCAAAAATCGGACATCTCGAGGCTTCATGTGCCCGACTATTATCCGAAGG
CCATTAGTTTCGATCCCCTTTGCTTCGAGCCTGATGTGGAAGCCACGCTG
TTTGCTCCTGCTGGTATGTCAGATGGAGAAGTTTTCGGTGAATATCCCTT
CGACCTACTCGTAGATTGCGTTAATCCTCCAGTCGAATCCGCCGTGGTGT
TGCCGACTGCTTACCCTCCTACAGCTCCTCCGGGCCCTGCTCCTCAGGAT
GAACTCTCATATGGGCCGCCCGTCGCCCAAGTGGACATCCCTCCTGGCGA
GGTTACTGTCGAAGCCGAAAGTCCTGTAGGTGATGCGCTGGTTCAGACGT
CCACTGGGGGCGTCGACATCGCCCCGTCCTCTCCGTTTCCACACTTTCCC
GCTTCGGTCACGGCTGCGGCTTCAGATCTCCGTCATGTCTACCGTACCGT
CGGTATTACGACCATGATGGACATTACAACGGTCCTGAGGGAAGCTTGCT
CCTGGGCGCCTCGCTCGGAACGCTACGCCACAGTCGTACAACAGGGTCAG
GATCTAAAGACCGCTATGGTCAATCTCCTGCAGCAGAATGCACAGGTGAT
GTCCTAG
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protein sequence of Gchil7753.t1

>Gchil7753.t1 ID=Gchil7753.t1|Name=Gchil7753.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=419bp
MSNRVSWNEMHEPDVHLPQSLGFFFCWHPVEFHDMSAEKRLPLYLSLSQE
DEIQWAMYWRVSPLLLVATPSMVAYHSSQPMGDDNDRRSWLSWQVLFVEF
GVMSLMAFLDTAKYVIRGNVCSEDWRVWYDENIPGPRGRLILLPDIMIRF
LRNLGIQWTQFGVEETEPLLDHVLEVEWGKIPRILRYDWDTDSFKPIPRH
PQGRDDARAYPAKPLRNQKSDISRLHVPDYYPKAISFDPLCFEPDVEATL
FAPAGMSDGEVFGEYPFDLLVDCVNPPVESAVVLPTAYPPTAPPGPAPQD
ELSYGPPVAQVDIPPGEVTVEAESPVGDALVQTSTGGVDIAPSSPFPHFP
ASVTAAASDLRHVYRTVGITTMMDITTVLREACSWAPRSERYATVVQQGQ
DLKTAMVNLLQQNAQVMS*
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mRNA from alignment at tig00025321_pilon:902943..904199-

Legend: polypeptideCDSexonstart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7753.t1 ID=Gchil7753.t1|Name=Gchil7753.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1257bp|location=Sequence derived from alignment at tig00025321_pilon:902943..904199- (Gracilaria chilensis NLEC103_M9 male)
ATGTCCAACCGGGTCTCTTGGAACGAGATGCACGAGCCTGATGTTCATCT
GCCTCAATCCCTGGGGTTCTTCTTTTGTTGGCATCCAGTGGAGTTTCACG
ACATGAGCGCCGAAAAACGCCTTCCGTTGTACCTCTCGCTTTCCCAAGAG
GATGAGATCCAATGGGCCATGTATTGGCGTGTCTCGCCGCTCCTTCTGGT
TGCCACGCCGTCCATGGTGGCGTACCACTCGTCCCAACCCATGGGCGACG
ACAATGACCGAAGGTCGTGGCTGTCCTGGCAGGTACTCTTCGTTGAGTTC
GGCGTGATGTCCCTTATGGCCTTTCTGGATACCGCGAAGTACGTAATCCG
TGGTAATGTCTGTTCGGAGGATTGGAGGGTATGGTACGATGAGAACATAC
CAGGTCCTCGAGGTCGCCTAATCCTACTCCCAGACATCATGATCCGTTTC
CTAAGGAACCTGGGCATCCAGTGGACCCAGTTCGGCGTCGAGGAGACCGA
ACCCCTCTTGGATCATGTACTAGAGGTGGAGTGGGGCAAGATTCCTAGGA
TCCTTCGGTATGACTGGGATACCGACTCATTCAAACCGATTCCGCGGCAT
CCGCAGGGTCGGGACGACGCTCGTGCCTATCCCGCCAAGCCTTTGAGAAA
TCAAAAATCGGACATCTCGAGGCTTCATGTGCCCGACTATTATCCGAAGG
CCATTAGTTTCGATCCCCTTTGCTTCGAGCCTGATGTGGAAGCCACGCTG
TTTGCTCCTGCTGGTATGTCAGATGGAGAAGTTTTCGGTGAATATCCCTT
CGACCTACTCGTAGATTGCGTTAATCCTCCAGTCGAATCCGCCGTGGTGT
TGCCGACTGCTTACCCTCCTACAGCTCCTCCGGGCCCTGCTCCTCAGGAT
GAACTCTCATATGGGCCGCCCGTCGCCCAAGTGGACATCCCTCCTGGCGA
GGTTACTGTCGAAGCCGAAAGTCCTGTAGGTGATGCGCTGGTTCAGACGT
CCACTGGGGGCGTCGACATCGCCCCGTCCTCTCCGTTTCCACACTTTCCC
GCTTCGGTCACGGCTGCGGCTTCAGATCTCCGTCATGTCTACCGTACCGT
CGGTATTACGACCATGATGGACATTACAACGGTCCTGAGGGAAGCTTGCT
CCTGGGCGCCTCGCTCGGAACGCTACGCCACAGTCGTACAACAGGGTCAG
GATCTAAAGACCGCTATGGTCAATCTCCTGCAGCAGAATGCACAGGTGAT
GTCCTAG
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Coding sequence (CDS) from alignment at tig00025321_pilon:902943..904199-

>Gchil7753.t1 ID=Gchil7753.t1|Name=Gchil7753.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1257bp|location=Sequence derived from alignment at tig00025321_pilon:902943..904199- (Gracilaria chilensis NLEC103_M9 male)
ATGTCCAACCGGGTCTCTTGGAACGAGATGCACGAGCCTGATGTTCATCT
GCCTCAATCCCTGGGGTTCTTCTTTTGTTGGCATCCAGTGGAGTTTCACG
ACATGAGCGCCGAAAAACGCCTTCCGTTGTACCTCTCGCTTTCCCAAGAG
GATGAGATCCAATGGGCCATGTATTGGCGTGTCTCGCCGCTCCTTCTGGT
TGCCACGCCGTCCATGGTGGCGTACCACTCGTCCCAACCCATGGGCGACG
ACAATGACCGAAGGTCGTGGCTGTCCTGGCAGGTACTCTTCGTTGAGTTC
GGCGTGATGTCCCTTATGGCCTTTCTGGATACCGCGAAGTACGTAATCCG
TGGTAATGTCTGTTCGGAGGATTGGAGGGTATGGTACGATGAGAACATAC
CAGGTCCTCGAGGTCGCCTAATCCTACTCCCAGACATCATGATCCGTTTC
CTAAGGAACCTGGGCATCCAGTGGACCCAGTTCGGCGTCGAGGAGACCGA
ACCCCTCTTGGATCATGTACTAGAGGTGGAGTGGGGCAAGATTCCTAGGA
TCCTTCGGTATGACTGGGATACCGACTCATTCAAACCGATTCCGCGGCAT
CCGCAGGGTCGGGACGACGCTCGTGCCTATCCCGCCAAGCCTTTGAGAAA
TCAAAAATCGGACATCTCGAGGCTTCATGTGCCCGACTATTATCCGAAGG
CCATTAGTTTCGATCCCCTTTGCTTCGAGCCTGATGTGGAAGCCACGCTG
TTTGCTCCTGCTGGTATGTCAGATGGAGAAGTTTTCGGTGAATATCCCTT
CGACCTACTCGTAGATTGCGTTAATCCTCCAGTCGAATCCGCCGTGGTGT
TGCCGACTGCTTACCCTCCTACAGCTCCTCCGGGCCCTGCTCCTCAGGAT
GAACTCTCATATGGGCCGCCCGTCGCCCAAGTGGACATCCCTCCTGGCGA
GGTTACTGTCGAAGCCGAAAGTCCTGTAGGTGATGCGCTGGTTCAGACGT
CCACTGGGGGCGTCGACATCGCCCCGTCCTCTCCGTTTCCACACTTTCCC
GCTTCGGTCACGGCTGCGGCTTCAGATCTCCGTCATGTCTACCGTACCGT
CGGTATTACGACCATGATGGACATTACAACGGTCCTGAGGGAAGCTTGCT
CCTGGGCGCCTCGCTCGGAACGCTACGCCACAGTCGTACAACAGGGTCAG
GATCTAAAGACCGCTATGGTCAATCTCCTGCAGCAGAATGCACAGGTGAT
GTCCTAG
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