Gchil7753.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7753.t1
Unique Name	Gchil7753.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	419

Homology

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BLAST of Gchil7753.t1 vs. uniprot
Match: A0A2V3J2I3_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2I3_9FLOR)

HSP 1 Score: 186 bits (471), Expect = 4.180e-50
Identity = 107/261 (41.00%), Postives = 144/261 (55.17%), Query Frame = 0

Query:    3 NRVSWNEMHEPDVHLPQSLGFFFCWHPVEFHDMSAEKRLPLYLSLSQEDEIQWAMYWRVSPLLLVATPSMVAYHSSQPMGDDNDRRSWLSWQVLFVEFGVMSLMAFLDTAKYVIRGNVCSEDWRVW-YDENIPGPRGRLILLPDIMIRFLRNLGIQW----TQFGVEETEPLLDHVLEVEWGKIPRILRYDWDTDSFKPIPRHPQGRDDARAYPAKPLRNQKSDISRLHVPDYYPKAISFDPLCFEPDVEATLFAPAGMSD 258
            +R  WNE  EP+  +  +LG+ FCWH VEFHDM A  R  LYL++    +I     WRVS LL V TP + A+HS Q   +  DRR+WL+WQVL VE+ V  LMAFLDT ++ +R NV + D+RVW +D   P P GRL+ LP ++I +LR LGIQ     T +G E  E LLD+VL V+W   P  L    D    +P+   P G   +     +P       +  +  P   P AI+  P    P VE  L AP  +++
Sbjct:   59 DRTYWNEFTEPEGRMRTNLGYLFCWHQVEFHDMEAPDRSGLYLTMPFFQDIDRQDLWRVSNLLAVPTPPLAAFHSRQMANNPTDRRNWLTWQVLTVEWAVFVLMAFLDTGRFGVRCNVRTNDYRVWSHDNACPSPVGRLVRLPRMIIVYLRGLGIQNLVRDTAYGTERVENLLDYVLRVDWANTPGYLCGLEDLVGGEPVDPIPNGVPHSAPVVTEPF------VPAVVAPTVDPPAIAAPP----PVVE--LAAPEAVAE 307

[Close]

BLAST of Gchil7753.t1 vs. uniprot
Match: A0A2V3IPW8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IPW8_9FLOR)

HSP 1 Score: 79.0 bits (193), Expect = 4.120e-12
Identity = 71/254 (27.95%), Postives = 111/254 (43.70%), Query Frame = 0

Query:    3 NRVSWNEMHEPDVHLPQSL-GFFFCWHPVEFHDMSAEKRLPLYLSLSQEDEIQWAMYWRVSPLLLVATPSMVAYHSSQPMGDDNDRRSWLSWQVLFV---EFGVMSLMAFLDTAKYVIRGNVCSEDWRVWYDENIPGPR--------GRLILLPDIMIRFLRNLGIQ----WTQFGVEETEPLLDHVLEVEWGKIPRILRYDWDTDSFKPIPRHPQGRDDARAYPAKPLRNQKSDISRLHVPDYYPKAISFDPL 240
            NR  W +    +  L  +  G+ FCWH +EF D+S   R  LY+   Q     W  +  V+  L V TP ++AY+S + + D     S LS +V+ +   E+ V +LMAFL +    +R    +ED RV +    PG          GRL  LP  ++  +  +G++     T +  E     L   +  +W   P  L +D  T++F  +PR P            PL +    +  +  P  +P    FDPL
Sbjct:  252 NRCRWGDNIATEARLRSNRDGYMFCWHNIEFFDVSPADREKLYVRAPQN----WGEF-DVTRDLSVITPPVLAYYSGEVLRD-----SALSERVMRIAIAEWAVCALMAFLQSVSEGVRVFTRTEDPRVNFFRGFPGQPNTREPPGLGRLFPLPYGLVSLVIQMGLENVLRGTIYATETARRWLYLSVMTDWVVTPGYLWFDPRTETFPEMPRIPTD--------PFPLTHCLQ-LGPVRPPWDFPNVAEFDPL 486

The following BLAST results are available for this feature:

BLAST of Gchil7753.t1 vs. uniprot

BLAST of Gchil7753.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J2I3_9FLOR	4.180e-50	41.00	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A2V3IPW8_9FLOR	4.120e-12	27.95	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 110..418
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..56
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 90..109
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 79..89
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 57..78

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00025321_pilon	contig	tig00025321_pilon:902943..904199 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7753.t1	Gchil7753.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00025321_pilon 902943..904199 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7753.t1 ID=Gchil7753.t1|Name=Gchil7753.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=419bp
MSNRVSWNEMHEPDVHLPQSLGFFFCWHPVEFHDMSAEKRLPLYLSLSQE
DEIQWAMYWRVSPLLLVATPSMVAYHSSQPMGDDNDRRSWLSWQVLFVEF
GVMSLMAFLDTAKYVIRGNVCSEDWRVWYDENIPGPRGRLILLPDIMIRF
LRNLGIQWTQFGVEETEPLLDHVLEVEWGKIPRILRYDWDTDSFKPIPRH
PQGRDDARAYPAKPLRNQKSDISRLHVPDYYPKAISFDPLCFEPDVEATL
FAPAGMSDGEVFGEYPFDLLVDCVNPPVESAVVLPTAYPPTAPPGPAPQD
ELSYGPPVAQVDIPPGEVTVEAESPVGDALVQTSTGGVDIAPSSPFPHFP
ASVTAAASDLRHVYRTVGITTMMDITTVLREACSWAPRSERYATVVQQGQ
DLKTAMVNLLQQNAQVMS*