Gchil7766.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7766.t1
Unique NameGchil7766.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length485
Homology
BLAST of Gchil7766.t1 vs. uniprot
Match: A0A2V3J0V9_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0V9_9FLOR)

HSP 1 Score: 313 bits (801), Expect = 4.180e-98
Identity = 191/473 (40.38%), Postives = 280/473 (59.20%), Query Frame = 0
Query:   14 GIDFTPHFTISTLQFQSEALNTIATSLLTTLLIANLGSIINRLVFLTHRDYFSYSSFARSFVFLNSDDPLRLWFWIRGRYDFRANNRPPAH---------HRMCKRYVITPLCARMAILFVSIGSIALALPSEKRLNACSRGDYTIIQSELSAQPNVSPQE---LLRVCSQIPLKTDLGTVRSTASYCSFMTTPGDIPSLTNLASLMENLTTMGVIGAGYFKESGLLLSIIVSGDRIQAISSFVEWKTE-NNDLYHSVLPYWNSERHLKSITDGLTQALEKECNVLSTSLEDMGDDSLLVGLVDCTF--DANFAIRYVSASVRESLRFQKKERLALRT-LAKGDSISEARRICAVDISVSRPLLNIVPLFVGVVIAFCLNLAVVVSVSRHGNAMDAAFHLVREVLGHDTGANPLQISARKKEEGSIPLRKFVCADGVSAHIGFVQGLGDVVVEEFSSGRTVGRCMQVACQGPR 470
            G+D+TP  TIST+QF++E +NT+ATSL+   L+ NLGSIINRLVF++ +  F+Y SF R+F+F++SDD  RL +W +G+  + +   P            +R+ +R ++ P+CAR+ ++  SI SIAL +P +K  ++C R DY      +S  PN S +    L R+C  IP+ T  G V S  SYCS +     +P  TN  +L E  T    + AGY+++ GLL+S      R   + SFVEW+   N ++Y S +  W+ ERHL    +G+++   + C + ST  + +    + +GL+ C    D       V+ +VR+SL + K      R+ L  G+     +R C V ISV RP++NIVPL V +V+ + LN AV  +VS  G+ MDA F LV+E LGHD  +NPL+ S  +KE   + L++F CADG SAHIGF++G GD VVEEFS G+ V +C Q   QGPR
Sbjct:    6 GVDYTPLLTISTIQFENEVVNTVATSLIVVFLLTNLGSIINRLVFISDKTQFNYRSFLRAFIFMHSDDITRLAYWWKGKNPYLSLLNPGGSGGGRAQRMLNRVQRRRLLLPVCARILLVVSSIASIALTIPGKKTFSSCGRADYEPQMGSVS--PNFSEEPGGVLTRLCRDIPINTKRGDVSSKVSYCSTV-----LPLDTN--ALFEESTA---VIAGYWEQGGLLISGYTVNGRSNLVLSFVEWQRGVNGNIYRSHIRQWSPERHLGVCAEGISRDRNRACTIQSTRNDSIQGVGVTLGLLSCDDAPDLQSGSSLVAGAVRDSLGWVKFRSTIQRSKLTGGEFRIPQQRECPVVISVERPVVNIVPLLVALVMMYTLNYAVNETVSHKGDIMDALFLLVKETLGHDCTSNPLEDSGGEKEVDVLQLQRFECADGRSAHIGFLRGRGDRVVEEFSDGKLVHQCYQTRAQGPR 466          
BLAST of Gchil7766.t1 vs. uniprot
Match: R7QQN3_CHOCR (Uncharacterized protein n=3 Tax=Chondrus crispus TaxID=2769 RepID=R7QQN3_CHOCR)

HSP 1 Score: 253 bits (646), Expect = 2.380e-74
Identity = 163/472 (34.53%), Postives = 264/472 (55.93%), Query Frame = 0
Query:   10 TIVEGIDFTPHFTISTLQFQSEALNTIATSLLTTLLIANLGSIINRLVFLTHRDYFSYSSFARSFVFLNSDDPLRLWFWIRGRYDFRANNRPPAHHRMCKRYVITPLCARMAILFVSIGSIALALPSEKRLNACSRGDYTIIQSELSAQPNVSPQ--ELLRVCSQIPLKTDLGTVRSTASYCSFMTTPGDIPSLTNLASLMENLTTMGVIGAGYFKESGLLLSIIVSGDRIQAISSFVEW----KTENND--LYHSVLPYWNSERHLKSITDGLTQALEKECNVLSTSLEDMGDDSLLVG---LVDCTFDANFAIRYVSASVRESLRFQKKERLALRTLAKGDSISEARR---ICAVDISVSRPLLNIVPLFVGVVIAFCLNLAVVVSVSRHGNAMDAAFHLVREVLGHDTGANPLQISARKKEEGSIPLRKFVCADGVSAHIGFVQGLGDVVVEEFSSGRTVGRCMQVACQ 467
            T+++ ++ TP F+ ST+Q  S+ +N +  SLLT  +I+N+ S+ ++L+F +    F Y S+ RSF+F+NSDDP+R++ WI  RY ++        + +  R ++ PL AR+ IL  +I S+A+++PSEKRL+ C +GD+ I        PNV     +L RVC+ IPL T LG VRS  SYCS +   G    ++     +  +TT          ESG L + +VS ++  A + +++W    +  +ND  L  + +   +S+ HL+ I + L     ++C    TS +   +D+ L+    ++DC FD    I  V A V  SL   K  R  +    + + +++  R    C +D+ VSRP++NI+PL + +V+   +N+ V +  SR GNA D  FH+++E LGHDT +NPL+ ++ + E   +PLRK+ C  G +AH GF+   GDV V+ F S   V  C QV  +
Sbjct:    2 TLLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKGCTRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFRI-----HMDPNVRKPAPDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVSEGEGGIVTITT----------ESGQLWTALVSKNKTAASAFYIQWVKNRRQRDNDKSLLFTNVEKIDSDDHLQVIANALRSETVQQCTAKGTSDKLPSEDNSLIAKAQILDCDFDPLSLIARVQAYVTGSLTLNKLRRGEMDNRLELNPLTDEVRETAACPIDVVVSRPIVNILPLALMLVLWGIINVLVSIYTSRRGNAFDMGFHIIKEALGHDTTSNPLEENSNRGEAMELPLRKWRCGAG-AAHEGFIGRDGDVPVQGFDSFTNVCGCTQVVTE 457          
BLAST of Gchil7766.t1 vs. uniprot
Match: A0A2V3II47_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II47_9FLOR)

HSP 1 Score: 221 bits (563), Expect = 1.300e-63
Identity = 141/463 (30.45%), Postives = 224/463 (48.38%), Query Frame = 0
Query:   13 EGIDFTPHFTISTLQFQSEALNTIATSLLTTLLIANLGSIINRLVFLTHRDYFSYSSFARSFVFLNSDDPLRLWFWIRGRYDFRANNRPPAHHRMCKRYVITPLCARMAILFVSIGSIALALPSEKRLNACSRGDYTIIQSELSAQPNVSPQELLRVCSQIPLKTDLGTVRSTASYCSFMTTPGDIPSLTNLASLMENLTTMGVIGAGYFKESGLLLSIIVSGDRIQAISSFVEWKTENNDLYHSVLPYWNSERHLKSITDGLTQALEKECNVLSTSLEDMGDDSLLVGLVDCTFDANFAIRYVSASVRESLRFQKKERLALR--TLAKGDSISEARRICAVDISVSRPLLNIVPLFVGVVIAFCLNLAVVVSVSRHGNAMDAAFHLVREVLGHDTGANPLQISARKKEEGSIPLRKFVCADGVSAHIGFVQGLGDVVVEEFSSGRTVGRCMQVACQGPRFVR 473
            EG+ F P+ T+ST+QF S+ LN+I  +L+TT++IAN  SI+N+LV ++ +D FS++S+ R+FVF NSDDP   +  +RGRY F   N      ++ K+ +I PL AR                                                                    Y  F            + S  E L   G++ AG   + G L S++VS  ++  +   V+W   N D++HS +  + S  HL  + D + Q  +  C +          + + +  +DC F        +  ++ +SL FQ++E +ALR    A G S+ ++R  CA +I+++RPL+N++ L +G V AF +N      +S   +     FH+VRE+LGHDT ANPLQ    ++++  + +R+FVC +  SAH+ F++G GD VV+     R V  C Q+AC G R VR
Sbjct:   26 EGLKFNPNLTLSTIQFSSDNLNSIVAALITTIIIANPQSIVNKLVAVSKQDVFSFNSYRRAFVFANSDDPSLGFSCLRGRYGFGFGNGSHTQLKLRKKLLIVPLFAR--------------------------------------------------------------------YSDF----------AKVVSKTEELRVPGLLMAGQDLKIGALFSVLVSCKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPTKSTCEIRRVEPISDSANGVFMASLDCAFPPEKEFSTLLVAMTKSLHFQEQEEVALRHRRFANGSSVMDSRT-CAAEITINRPLMNLILLVIGAVAAFAVNKTTAALLSCRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTIRRFVCINEESAHVCFMEGDGDRVVQHLEDSRHVACCSQIACVGRRLVR 409          
BLAST of Gchil7766.t1 vs. uniprot
Match: A0A2V3II31_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3II31_9FLOR)

HSP 1 Score: 170 bits (430), Expect = 1.460e-45
Identity = 95/287 (33.10%), Postives = 155/287 (54.01%), Query Frame = 0
Query:  189 CSFMTTPGDIPSLTNLASLMENLTTMGVIGAGYFKESGLLLSIIVSGDRIQAISSFVEWKTENNDLYHSVLPYWNSERHLKSITDGLTQALEKECNVLSTSLEDMGDDSLLVGLVDCTFDANFAIRYVSASVRESLRFQKKERLALR--TLAKGDSISEARRICAVDISVSRPLLNIVPLFVGVVIAFCLNLAVVVSVSRHGNAMDAAFHLVREVLGHDTGANPLQISARKKEEGSIPLRKFVCADGVSAHIGFVQGLGDVVVEEFSSGRTVGRCMQVACQGPRFVR 473
            CSF+    D      + S  E L   G++ A    + G L S++VS  ++  +   V+W   N D++HS +  + S  HL  + D + Q     C +          + +++  +DC F     +  V  +V +SL  Q++E +ALR  T A G S+ ++R   A +I++ RPL+N++ L +G V AF +N      +S   +     FH+VRE+LGHDT ANPLQ    ++++  + +++FVC +G SAH+GF++G GD VV+   + R V  C Q+AC+G R VR
Sbjct:    2 CSFLLPIID-SDFAKVVSKTEELRVPGLLMAVQDLKIGALFSVLVSSKKVVVLGFGVKWAMPNGDVFHSKVSNYESYVHLGVLADAVRQPNNSTCEIRRVEPISDSANGVVMASLDCAFPPEKVLNTVLVAVTKSLHLQEQEEVALRHRTFANGSSVMDSRTWAA-EITIKRPLMNLILLVIGAVAAFAVNKTTAALLSSRADVTHLGFHMVRELLGHDTRANPLQHGKEQEQDQRVTMQRFVCINGESAHVGFMEGDGDRVVQHLENIRHVACCSQIACEGRRLVR 286          
BLAST of Gchil7766.t1 vs. uniprot
Match: R7QI75_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QI75_CHOCR)

HSP 1 Score: 154 bits (389), Expect = 1.100e-39
Identity = 99/299 (33.11%), Postives = 166/299 (55.52%), Query Frame = 0
Query:   10 TIVEGIDFTPHFTISTLQFQSEALNTIATSLLTTLLIANLGSIINRLVFLTHRDYFSYSSFARSFVFLNSDDPLRLWFWIRGRYDFRANNRPPAHHRMCKRYVITPLCARMAILFVSIGSIALALPSEKRLNACSRGDYTIIQSELSAQPNVSPQ--ELLRVCSQIPLKTDLGTVRSTASYCSFMTTPGDIPSLTNLASLMENLTTMGVIGAGYFKESGLLLSIIVSGDRIQAISSFVEW----KTENND--LYHSVLPYWNSERHLKSITDGLTQALEKECNVLSTSLEDMGDDSLLV 300
            T+++ ++ TP F+ ST+Q  S+ +N +  SLLT  +I+N+ S+ ++L+F +    F Y S+ RSF+F+NSDDP+R++ WI  RY ++        + +  R ++ PL AR+ IL  +I S+A+++PSEKRL+ C +GD+ I        PNV     +L RVC+ IPL T LG VRS  SYCS +   G    ++     +  +TT          ESG L + +VS +   A + +++W    +  +ND  L  + +   +S+ HL+ I + L     ++C    TS +   +D+ L+
Sbjct:    2 TLLQELNATPDFSFSTVQTSSDIINALIISLLTVFVISNILSVTSKLIFSSREKSFEYLSWVRSFIFVNSDDPIRIFSWIWHRYSYKEKGCTRYRNEIQLRRLLLPLLARLFILVTAITSVAISIPSEKRLSGCEKGDFRI-----HMDPNVRKPAPDLNRVCADIPLTTTLGEVRSRVSYCSCLVDFGSNVPVSEGEGGIVTITT----------ESGQLWTALVSKNNTAASAFYIQWVKNRRQRDNDKSLLFTNVEKIDSDDHLQVIANALRSETVQQCTAKGTSDKLPSEDNSLI 285          
The following BLAST results are available for this feature:
BLAST of Gchil7766.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J0V9_9FLOR4.180e-9840.38Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QQN3_CHOCR2.380e-7434.53Uncharacterized protein n=3 Tax=Chondrus crispus T... [more]
A0A2V3II47_9FLOR1.300e-6330.45Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3II31_9FLOR1.460e-4533.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QI75_CHOCR1.100e-3933.11Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 135..359
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..134
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 59..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 383..484
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..35
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 360..382
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 36..58
NoneNo IPR availableTMHMMTMhelixcoord: 112..134
NoneNo IPR availableTMHMMTMhelixcoord: 363..385

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:1333400..1334854 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7766.t1Gchil7766.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 1333400..1334854 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7766.t1 ID=Gchil7766.t1|Name=Gchil7766.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=485bp
MVVANITTATIVEGIDFTPHFTISTLQFQSEALNTIATSLLTTLLIANLG
SIINRLVFLTHRDYFSYSSFARSFVFLNSDDPLRLWFWIRGRYDFRANNR
PPAHHRMCKRYVITPLCARMAILFVSIGSIALALPSEKRLNACSRGDYTI
IQSELSAQPNVSPQELLRVCSQIPLKTDLGTVRSTASYCSFMTTPGDIPS
LTNLASLMENLTTMGVIGAGYFKESGLLLSIIVSGDRIQAISSFVEWKTE
NNDLYHSVLPYWNSERHLKSITDGLTQALEKECNVLSTSLEDMGDDSLLV
GLVDCTFDANFAIRYVSASVRESLRFQKKERLALRTLAKGDSISEARRIC
AVDISVSRPLLNIVPLFVGVVIAFCLNLAVVVSVSRHGNAMDAAFHLVRE
VLGHDTGANPLQISARKKEEGSIPLRKFVCADGVSAHIGFVQGLGDVVVE
EFSSGRTVGRCMQVACQGPRFVRKMPEKGNVTVI*
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