Gchil7720.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7720.t1
Unique NameGchil7720.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length477
Homology
BLAST of Gchil7720.t1 vs. uniprot
Match: A0A2V3IME3_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IME3_9FLOR)

HSP 1 Score: 361 bits (927), Expect = 6.690e-118
Identity = 194/432 (44.91%), Postives = 279/432 (64.58%), Query Frame = 0
Query:   51 ISIVFTFISLSILSIASAY-GPTCRSKNIFPHVSCEPQCAPYSYNTQVKCRKNEQFGCSYERCSGMNFQCSLNQTTENNNPCPNGEVPVENVSLQHYHPVEVNLAINLRGYPLHVLLLIDASAPSS-QINALKPEMVSLLRKLEGTAEVSVAIYGAEQEFDSSGYSVLAAKSDDVTQAIQALDGIPQKADGARTTLTALRSLVHN--GI-LRASKDVVLLIGDTPGREPECGVGFDRIQTANELYSVHTGAVLLPVSIGTPGLDGALPAPEACPN-SYIETKPIDENQASYIASHTQGEVIETVTADEMLQAIDRARRKDGRIHQRPPGSYISVSTARFPNIVGPFTVPEQFQTYSNGCEERVIATLTGVSGFVSAPAQTNAKLKLDLPLTACLEGPFSCEVRIVERQQGYEAMSVWYRPLVIYEIITVSAC 476
            IS++   +SL+  + A  Y GP CR KN+FP V+CE +C  Y  N    C +  QFGC Y++CS  +++C+LN   E +NPCPNGEVPV++++L  +  V+ NLAINLRGY   V+LLID S+ +   + A+K E+ S +R+L G+A+V VA+YG+E+ +D SG SVL+A +D V  A++AL+ IP+  DG RTT+TAL++L  +  G+ LR +K +++LIGD PGREP+C  G++R         V   + ++ VS+G+ GL+ ALPAP AC N SY +  PI   QA  I + T GEV+E VTA  +L A+D  RR+    + RPPGS I VS+A FP   GP+T P   Q YSNGC  +V    +G+  F+SAPA+  A + + LP   C+ GPF+CE+R+VE ++G E  S W  P   +E+I +  C
Sbjct:    5 ISVIILVVSLTSGAQAIEYWGPQCRRKNVFPFVTCESKCFSYYPNFGSGCSQKAQFGCEYKKCSSSSYRCALNPAVEKDNPCPNGEVPVKSINLTSF--VDFNLAINLRGYSTDVVLLIDTSSSTRPHLKAIKNELSSFVRQLNGSAKVGVAVYGSEESYDESGLSVLSAVTDYVDPALEALESIPETVDGTRTTITALKTLSSSVAGLNLRGNKRIIVLIGDRPGREPDCRNGYNRDM-------VLPSSTMISVSLGSDGLNSALPAPSACMNGSYYDPSPIAVGQARDIVNRTNGEVVEIVTAASLLWAVDTVRRRPVYWYNRPPGSNIRVSSASFPLYRGPYTPP--VQRYSNGCGNKVYLRTSGLPAFISAPAEVTASVHVALPKGVCIHGPFTCEIRVVEIRRGGEYPSSWSIPFEHFEVIKIHGC 425          
BLAST of Gchil7720.t1 vs. uniprot
Match: A0A2V3IEV7_9FLOR (VWFA domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IEV7_9FLOR)

HSP 1 Score: 202 bits (514), Expect = 2.410e-57
Identity = 124/352 (35.23%), Postives = 200/352 (56.82%), Query Frame = 0
Query:  138 VENVSLQHYHPVEVNLAINLRGYPLHVLLLIDASAPS-SQINALKPEMVSLLRKLEGTAEVSVAIYGAEQEFDSSGYSVLAAKSDDVTQAIQALDGIPQKADGARTTLTALRSLVHNGI------LRASKDVVLLIGDTPGREPEC--GVGFDRIQTANELYSVHTGAVLLPVSIGTPGLDGALPAPEACPNSYIETKPIDENQASYIASHTQGEVIETVTADEMLQAIDRARRKDGR-IHQRPPGSYISVSTARFPNIVGPFTVPEQF---QTYSNGCEERVIATLTGVSGFVSAPAQTNAKLKLDLPLTACLEGPFSCEVRIVERQQGYEAMSVWYRPLVIYEIITVSAC 476
            V NV+L+H+ P++++L IN+ G    +++L+DAS  + +++N +K ++ S +R L     VSVA YG E +   +GYSV    + DV +A +ALD IP  ADG RT++TA+ S++ +        L A++ +++L+GDTPGREPEC  G+  DR+  +++   V      + V++ +PGL+ ALPAP AC   YI +  I E Q + +A  ++GE+I  VT+ ++ ++I + R      +H +  GS+ISV +  +      +T P  F      + GC++RVI   + +  F   P Q   K+ L LP   C  GPF CEV + ER + + + S W  P     +I V AC
Sbjct:    2 VNNVTLRHHFPIDISLDINVPGDTQDIVMLVDASQSTRAKLNNVKEQLKSFVRTLGDVGNVSVAFYGGESDMGETGYSVALKATSDVNRAAEALDNIPIVADGPRTSITAMWSIMQHQDGTIPLGLFANRRIIVLVGDTPGREPECRHGIKSDRMSFSSQRTRV------MVVNLASPGLNAALPAPAAC--GYITSAAIPEGQGTRLADTSEGELISQVTSSKLRESILKLRMNAANGLHGK--GSHISVLSKTYTYT--EYTCPSSFCARTITTKGCDDRVIIRKSNIPDFAHGPVQMTGKISLSLPAGICQRGPFYCEVEVKERLERF-SYSHWSLPQRHTHLIGVKAC 340          
BLAST of Gchil7720.t1 vs. uniprot
Match: A0A2V3IGI2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IGI2_9FLOR)

HSP 1 Score: 190 bits (482), Expect = 8.780e-52
Identity = 133/385 (34.55%), Postives = 193/385 (50.13%), Query Frame = 0
Query:   73 CRSKNIFPHVSCEPQCAPYSYNTQVK-CRKNEQFGCSYERCSGMNFQCSLNQTTENNNPCPNGEVPVENVSLQHYHPVEVNLAINLRGYPLHVLLLIDA-SAPSSQINALKPEMVSLLRKLEGTAE-VSVAIYGAEQEFDSSGYSVLAAKSDDVTQAIQALDG---IPQKADGARTTLTALRSLVHNGI-LRASKDVVLLIGDTPGREPECGVGFDRIQTANELYSVHTGAV-LLPVSIGTPGLDGALPAPEACPNSYIETKPIDENQASYIASHTQGEVIETVTADEMLQAIDRARRKDGRIHQRPPGSYISVSTARFPNIVGPFTVPEQFQTYSNGCEERVIATLT-GVSGFVSAPAQTNAKLKLDLPLTACLEGPFSCEVRI 448
            CR    FPH++    C       QV  C    Q+G  +  C   +F CSL +    NN CPN E+PV  V +    P  V+L IN+    L V+LL+DA S+   +I ALKP++VS +R+LE  AE + +++ G E+ FD  G SVL   +++  +A+Q+LD    +P   DG R +L  L   + N +  R+ + +V+L+GDT GREP C   FDR    +       G   ++ VSIG PGL+  LP    C       + +  NQAS IA+ TQG  +E   AD +LQ +    R       +P G  ISV    F N   PF          + C+ RV    T G   F++ P +T  +L + L  + C++GPF C V +
Sbjct:   23 CRQDFFFPHITSPFGCTGNFTGFQVSDCLVASQWGYEFSPCGEESFACSLKREIAANNSCPNAELPVSTVRVNLNRPTFVSLGINVPRPTLDVILLLDAVSSTRERIIALKPQIVSFIRQLEDVAENIHISVSGTEESFDQRGTSVLQRTTNNFAEAVQSLDEFERLPPIPDGPRASLRFLLPSITNTVGFRSEQQIVVLVGDTSGREPTCV--FDRFDRTSFPSRFSGGQFSVVAVSIGDPGLNAPLPTQAPCTRFTPFVEAVTANQASTIANLTQGAFVEGFDADTLLQTVMNVSRNAPGNFGQPTGFDISVPQP-FSNFRRPFP---------SVCDGRVQFNSTMGNRFFLAGPLETTVQLSISLANSGCMDGPFQCPVTV 395          
The following BLAST results are available for this feature:
BLAST of Gchil7720.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IME3_9FLOR6.690e-11844.91VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IEV7_9FLOR2.410e-5735.23VWFA domain-containing protein n=1 Tax=Gracilariop... [more]
A0A2V3IGI2_9FLOR8.780e-5234.55Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036465von Willebrand factor A-like domain superfamilyGENE3D3.40.50.410von Willebrand factor, type A domaincoord: 157..364
e-value: 1.8E-6
score: 29.8
IPR036465von Willebrand factor A-like domain superfamilySUPERFAMILY53300vWA-likecoord: 161..351
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..69
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..476
NoneNo IPR availableCDDcd00198vWFAcoord: 162..268
e-value: 7.63833E-4
score: 38.3158
NoneNo IPR availableTMHMMTMhelixcoord: 48..70
IPR002035von Willebrand factor, type APROSITEPS50234VWFAcoord: 163..304
score: 8.544646

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:537618..539048 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7720.t1Gchil7720.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 537618..539048 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7720.t1 ID=Gchil7720.t1|Name=Gchil7720.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=477bp
MSKRRRSPSRSLHRNCDYPLIKAQPQNPVSSSVQISPQSFLPASSEMAIS
ISIVFTFISLSILSIASAYGPTCRSKNIFPHVSCEPQCAPYSYNTQVKCR
KNEQFGCSYERCSGMNFQCSLNQTTENNNPCPNGEVPVENVSLQHYHPVE
VNLAINLRGYPLHVLLLIDASAPSSQINALKPEMVSLLRKLEGTAEVSVA
IYGAEQEFDSSGYSVLAAKSDDVTQAIQALDGIPQKADGARTTLTALRSL
VHNGILRASKDVVLLIGDTPGREPECGVGFDRIQTANELYSVHTGAVLLP
VSIGTPGLDGALPAPEACPNSYIETKPIDENQASYIASHTQGEVIETVTA
DEMLQAIDRARRKDGRIHQRPPGSYISVSTARFPNIVGPFTVPEQFQTYS
NGCEERVIATLTGVSGFVSAPAQTNAKLKLDLPLTACLEGPFSCEVRIVE
RQQGYEAMSVWYRPLVIYEIITVSAC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036465vWFA_dom_sf
IPR002035VWF_A