Gchil7724.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7724.t1
Unique NameGchil7724.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length416
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:603257..604504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7724Gchil7724Gracilaria chilensis NLEC103_M9 malegenetig00025321_pilon 603257..604504 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7724.t1.start1Gchil7724.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00025321_pilon 603257..603259 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7724.t1.CDS1Gchil7724.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00025321_pilon 603257..604504 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7724.t1.exon1Gchil7724.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00025321_pilon 603257..604504 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7724.t1.stop1Gchil7724.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00025321_pilon 604502..604504 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7724.t1Gchil7724.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00025321_pilon 603257..604504 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7724.t1 ID=Gchil7724.t1|Name=Gchil7724.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=416bp
MNNAHYDSLPGSSEAANLLNTSSHAQVSERHVSRRFRVSLGSSKVRAVLA
IAALVGTVLLVTDSSQFDRIYRRSRVSRVLPNFPTFWHRTSLYANTQFPV
REFYNDFDAGAPRIPYFPSQSFIRTDSSIEKDPSDEEVVTEEAVPTGDCS
GGLFCRARLVLTTKGTSTTVQAGYYIYPVSTRRQVDGSTQRRVKAVTQAE
AMTWATQLLDKLGPKLAEVNCQLNASKIADAIMSTKEDASKCNDTESSLC
SELAGLECEGEKEVEIENGCYKFIVSDSAIDDLHELVRGCPEVFFYYNRI
EIPLPLCTYTCPSDPLVRHTFVSKFIVQTTRPRDTVGYEDNFATLIRPVY
EAYALPLPNCEDTPTRNGGFYNHRRDQLAESLTGFEGKYGFTFGYIFFVN
QPPNTDDYIASICTV*
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spliced messenger RNA

>Gchil7724.t1 ID=Gchil7724.t1|Name=Gchil7724.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1248bp|location=Sequence derived from alignment at tig00025321_pilon:603257..604504+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAATAACGCTCACTATGACTCTTTACCGGGCAGTTCCGAAGCTGCGAA
TCTTTTGAACACTTCCTCCCACGCACAGGTCTCGGAGCGTCATGTGTCGC
GCCGTTTCCGTGTCTCTTTGGGCTCCTCCAAGGTGAGAGCGGTGTTGGCG
ATTGCTGCGCTAGTGGGAACCGTGCTGCTGGTCACTGATTCATCGCAATT
CGACCGCATTTATCGCCGATCTCGCGTAAGCCGTGTGTTGCCGAACTTTC
CCACCTTCTGGCACCGCACTTCGCTCTACGCGAACACCCAGTTCCCCGTC
CGTGAGTTCTACAACGACTTTGACGCAGGCGCTCCACGCATCCCATATTT
CCCGTCTCAAAGCTTCATTCGCACGGATTCGAGCATCGAGAAGGATCCCT
CTGACGAGGAGGTTGTCACAGAAGAGGCTGTACCCACCGGAGATTGCAGT
GGAGGACTGTTTTGCAGAGCGAGATTGGTGTTAACTACGAAAGGGACGAG
CACCACTGTTCAAGCGGGATACTACATATATCCTGTAAGCACCAGACGGC
AAGTGGACGGCTCAACACAACGCCGTGTGAAAGCTGTAACGCAGGCAGAA
GCCATGACGTGGGCAACTCAACTTCTGGATAAGCTCGGACCCAAACTTGC
GGAAGTGAACTGCCAGCTGAATGCATCGAAGATTGCTGACGCCATAATGT
CAACAAAAGAAGACGCATCCAAGTGTAACGACACCGAGTCGTCGCTTTGC
AGTGAACTGGCCGGTCTGGAATGTGAAGGTGAAAAAGAAGTGGAAATTGA
AAACGGATGTTACAAATTCATTGTGTCGGATTCGGCTATAGATGATCTTC
ACGAGTTGGTGCGCGGTTGTCCAGAAGTTTTTTTTTATTACAACCGAATT
GAAATACCTCTTCCCTTGTGTACATATACATGCCCATCCGACCCTTTGGT
ACGACACACATTTGTGTCTAAATTTATTGTGCAAACTACGCGGCCGAGAG
ATACCGTCGGTTACGAAGATAACTTTGCAACTTTAATCCGCCCGGTGTAC
GAGGCATATGCATTACCACTTCCGAACTGTGAAGACACCCCCACGAGAAA
TGGAGGCTTTTATAACCATCGCCGCGATCAACTTGCCGAATCTCTAACAG
GCTTTGAAGGGAAGTACGGCTTCACTTTTGGGTATATTTTCTTTGTTAAT
CAGCCGCCGAATACCGATGATTATATTGCGTCCATCTGTACAGTGTAA
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protein sequence of Gchil7724.t1

>Gchil7724.t1 ID=Gchil7724.t1|Name=Gchil7724.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=416bp
MNNAHYDSLPGSSEAANLLNTSSHAQVSERHVSRRFRVSLGSSKVRAVLA
IAALVGTVLLVTDSSQFDRIYRRSRVSRVLPNFPTFWHRTSLYANTQFPV
REFYNDFDAGAPRIPYFPSQSFIRTDSSIEKDPSDEEVVTEEAVPTGDCS
GGLFCRARLVLTTKGTSTTVQAGYYIYPVSTRRQVDGSTQRRVKAVTQAE
AMTWATQLLDKLGPKLAEVNCQLNASKIADAIMSTKEDASKCNDTESSLC
SELAGLECEGEKEVEIENGCYKFIVSDSAIDDLHELVRGCPEVFFYYNRI
EIPLPLCTYTCPSDPLVRHTFVSKFIVQTTRPRDTVGYEDNFATLIRPVY
EAYALPLPNCEDTPTRNGGFYNHRRDQLAESLTGFEGKYGFTFGYIFFVN
QPPNTDDYIASICTV*
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mRNA from alignment at tig00025321_pilon:603257..604504+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7724.t1 ID=Gchil7724.t1|Name=Gchil7724.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1248bp|location=Sequence derived from alignment at tig00025321_pilon:603257..604504+ (Gracilaria chilensis NLEC103_M9 male)
ATGAATAACGCTCACTATGACTCTTTACCGGGCAGTTCCGAAGCTGCGAA
TCTTTTGAACACTTCCTCCCACGCACAGGTCTCGGAGCGTCATGTGTCGC
GCCGTTTCCGTGTCTCTTTGGGCTCCTCCAAGGTGAGAGCGGTGTTGGCG
ATTGCTGCGCTAGTGGGAACCGTGCTGCTGGTCACTGATTCATCGCAATT
CGACCGCATTTATCGCCGATCTCGCGTAAGCCGTGTGTTGCCGAACTTTC
CCACCTTCTGGCACCGCACTTCGCTCTACGCGAACACCCAGTTCCCCGTC
CGTGAGTTCTACAACGACTTTGACGCAGGCGCTCCACGCATCCCATATTT
CCCGTCTCAAAGCTTCATTCGCACGGATTCGAGCATCGAGAAGGATCCCT
CTGACGAGGAGGTTGTCACAGAAGAGGCTGTACCCACCGGAGATTGCAGT
GGAGGACTGTTTTGCAGAGCGAGATTGGTGTTAACTACGAAAGGGACGAG
CACCACTGTTCAAGCGGGATACTACATATATCCTGTAAGCACCAGACGGC
AAGTGGACGGCTCAACACAACGCCGTGTGAAAGCTGTAACGCAGGCAGAA
GCCATGACGTGGGCAACTCAACTTCTGGATAAGCTCGGACCCAAACTTGC
GGAAGTGAACTGCCAGCTGAATGCATCGAAGATTGCTGACGCCATAATGT
CAACAAAAGAAGACGCATCCAAGTGTAACGACACCGAGTCGTCGCTTTGC
AGTGAACTGGCCGGTCTGGAATGTGAAGGTGAAAAAGAAGTGGAAATTGA
AAACGGATGTTACAAATTCATTGTGTCGGATTCGGCTATAGATGATCTTC
ACGAGTTGGTGCGCGGTTGTCCAGAAGTTTTTTTTTATTACAACCGAATT
GAAATACCTCTTCCCTTGTGTACATATACATGCCCATCCGACCCTTTGGT
ACGACACACATTTGTGTCTAAATTTATTGTGCAAACTACGCGGCCGAGAG
ATACCGTCGGTTACGAAGATAACTTTGCAACTTTAATCCGCCCGGTGTAC
GAGGCATATGCATTACCACTTCCGAACTGTGAAGACACCCCCACGAGAAA
TGGAGGCTTTTATAACCATCGCCGCGATCAACTTGCCGAATCTCTAACAG
GCTTTGAAGGGAAGTACGGCTTCACTTTTGGGTATATTTTCTTTGTTAAT
CAGCCGCCGAATACCGATGATTATATTGCGTCCATCTGTACAGTGTAA
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Coding sequence (CDS) from alignment at tig00025321_pilon:603257..604504+

>Gchil7724.t1 ID=Gchil7724.t1|Name=Gchil7724.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1248bp|location=Sequence derived from alignment at tig00025321_pilon:603257..604504+ (Gracilaria chilensis NLEC103_M9 male)
ATGAATAACGCTCACTATGACTCTTTACCGGGCAGTTCCGAAGCTGCGAA
TCTTTTGAACACTTCCTCCCACGCACAGGTCTCGGAGCGTCATGTGTCGC
GCCGTTTCCGTGTCTCTTTGGGCTCCTCCAAGGTGAGAGCGGTGTTGGCG
ATTGCTGCGCTAGTGGGAACCGTGCTGCTGGTCACTGATTCATCGCAATT
CGACCGCATTTATCGCCGATCTCGCGTAAGCCGTGTGTTGCCGAACTTTC
CCACCTTCTGGCACCGCACTTCGCTCTACGCGAACACCCAGTTCCCCGTC
CGTGAGTTCTACAACGACTTTGACGCAGGCGCTCCACGCATCCCATATTT
CCCGTCTCAAAGCTTCATTCGCACGGATTCGAGCATCGAGAAGGATCCCT
CTGACGAGGAGGTTGTCACAGAAGAGGCTGTACCCACCGGAGATTGCAGT
GGAGGACTGTTTTGCAGAGCGAGATTGGTGTTAACTACGAAAGGGACGAG
CACCACTGTTCAAGCGGGATACTACATATATCCTGTAAGCACCAGACGGC
AAGTGGACGGCTCAACACAACGCCGTGTGAAAGCTGTAACGCAGGCAGAA
GCCATGACGTGGGCAACTCAACTTCTGGATAAGCTCGGACCCAAACTTGC
GGAAGTGAACTGCCAGCTGAATGCATCGAAGATTGCTGACGCCATAATGT
CAACAAAAGAAGACGCATCCAAGTGTAACGACACCGAGTCGTCGCTTTGC
AGTGAACTGGCCGGTCTGGAATGTGAAGGTGAAAAAGAAGTGGAAATTGA
AAACGGATGTTACAAATTCATTGTGTCGGATTCGGCTATAGATGATCTTC
ACGAGTTGGTGCGCGGTTGTCCAGAAGTTTTTTTTTATTACAACCGAATT
GAAATACCTCTTCCCTTGTGTACATATACATGCCCATCCGACCCTTTGGT
ACGACACACATTTGTGTCTAAATTTATTGTGCAAACTACGCGGCCGAGAG
ATACCGTCGGTTACGAAGATAACTTTGCAACTTTAATCCGCCCGGTGTAC
GAGGCATATGCATTACCACTTCCGAACTGTGAAGACACCCCCACGAGAAA
TGGAGGCTTTTATAACCATCGCCGCGATCAACTTGCCGAATCTCTAACAG
GCTTTGAAGGGAAGTACGGCTTCACTTTTGGGTATATTTTCTTTGTTAAT
CAGCCGCCGAATACCGATGATTATATTGCGTCCATCTGTACAGTGTAA
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