Gchil7697.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7697.t1
Unique NameGchil7697.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length556
Homology
BLAST of Gchil7697.t1 vs. uniprot
Match: A0A2V3IVV5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IVV5_9FLOR)

HSP 1 Score: 468 bits (1204), Expect = 8.300e-157
Identity = 246/491 (50.10%), Postives = 332/491 (67.62%), Query Frame = 0
Query:   35 TVLALRSTVSQTRRTP------TRSKNDVLPRHVNNDLGPSGTLTILDRLRDAVGTAVQTWGFGPGRKHDIRHALASGPMPFVFRDTISAFSQPQCQQLGQQCELASHGFGTVGVVRYQFLGQRENIAGTSIQVQTACRCMGDDCNKAVLMRPVNITERNEDGTIHLTGKKSCIYQVFEGKFTDCHSETLRMQRKERVDHTING-LFIFEVDAMQHGHGSWTAVGHRGWDYSCVEEDFYSLPTVNMSSM-VNNISSEIQVYP-RLRRGELPSQNQSEDCKPPPNVMYFRDAEEREGEECGASFQFAMASASFLGSQMDEVAVGKDKRTYLKEPPEILVFWEIMVLVCAASLGLYFAISACTKFKKKNQWTVQRVLKLVAVLLMSLLFEAMPLHFALSFEVKALQWIGRFAYLGATVALGKDVVQPQSAVHGNILVLTAIVGESRFVSTSLLAVAMLSAFINVASLLILSGVICTFFIKQRRSAQNEPLSDD 516
            T+L L  T S    TP      +  K+  L RHV + +G  GTLT+L+RLRDA+GTA Q WGFGP   H + H+L  GP+  V+R+ ISA      +  G+  EL + GFGTVGVVRY F   R N+AG S QV TACRC G DC +A+L+RPVNITE   DG I LTG+KSCIYQ ++G FTDCHSET++ Q K +     +   ++FEV+A QHG GSW A+G RGWDY+C E+DF SLP VN+S + + NISSEI+ YP R   G +P  ++S  C+PPP V YFRD  E +G +C  +++F++A+ SF  SQMD+VA+G    +Y  E P +L FWE++VL CAASLGLYFA ++  K++KK  W+  R +KLVAV+LMS+ FEA+PLHFAL FE  A +W GRFAYL AT+A+GKD VQ Q + +GNI+VLTA++GES+++ T L+ V   +A +++  ++IL  V+   F+  R  A    + +D
Sbjct:   22 TLLILLRTPSTASATPVPEVHISADKDVPLLRHVKS-IGLEGTLTLLERLRDAIGTATQAWGFGPSLMHSVHHSLEHGPLRVVYRNAISA-ELGALKGAGRLKELMTRGFGTVGVVRYLFKSNRMNVAGESTQVMTACRCTGHDCTEAILLRPVNITETGPDGRIRLTGRKSCIYQFYKGTFTDCHSETIKTQDKRKGQSRHHSDYWVFEVNASQHGEGSWKALGFRGWDYACHEDDFKSLPRVNVSGIGMANISSEIEDYPLRKDEGPVPMDSRS-GCRPPPGVQYFRDEREEDGAQCAETYEFSIAAGSFRASQMDQVAIGMKADSYTSELPALLRFWEVLVLSCAASLGLYFAHASLAKYRKKGFWSRLRTVKLVAVILMSVAFEALPLHFALGFEADAKKWAGRFAYLAATIAVGKDQVQVQESAYGNIVVLTALLGESQYIETQLVTVVAFTAVVDIGGVVILLAVV---FVHCRARASRGKMGED 506          
BLAST of Gchil7697.t1 vs. uniprot
Match: R7QFH7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QFH7_CHOCR)

HSP 1 Score: 271 bits (693), Expect = 9.180e-80
Identity = 163/447 (36.47%), Postives = 241/447 (53.91%), Query Frame = 0
Query:   66 LGPSGTLTILDRLRDAVGTAVQTWGFGPGRKHDIRHALASGPMPFVFRDTISAFSQPQCQQL-GQQCELASHGFGTVGVVRYQFLGQRENIAGTSIQVQTACRCMGD-----DCNKAVLMRPVNITERNEDGTIHLTGKKSCIYQVFEGKFTDCHSETLRMQRK------ERVDHTINGLFIFEVDAMQHGHGSWTAVGHRGWDYSCVEEDFYSLPTVNMSSMVNNISSEIQVYPRLRRGELPSQNQSED------CKPPPNVMYFRDAEEREGEECGASFQFAMASASFLGSQMDEVAVGKDKRTYLKEPPEILVFWEIMVLVCAASLGLYFAISACTKFKKKNQWTVQRVLKLVAVL--LMSLLFEAMPLHFALSFEVKALQWIGRFAYLGATVALGKDVVQPQSAVHGNILVLTAIVGESRFVSTSLLAVAMLSAFINVASLLI 492
            +GP+GTL  L RL+D+VGTA Q W  GP  +H    A  +GPM  V+R  +++ +  +C    G QCE+A +GFGTVG V+Y F   REN+ G S QV  ACRC+G      +C  A+L+RP+ +T    DG    TG+  CIY+    KF+DCHSE +R+  +      E   H +N  F +EV     G   W A G RGW + C E +F +LP  N+S+              LRR +L   N +        C+PP  V Y+RD  E   +EC   + FA  S++ + +Q DE+AVG+D  TY+ E   +  + E+ + V AA LG+ FA S   K  KK          LV +L  +MS   EA+PLH AL+ EV    W  +FA++ AT+ L       Q +   ++LV+TA++GE  ++ T+   +A+++A  ++ ++ I
Sbjct:   37 VGPTGTLDPLRRLQDSVGTATQVWANGPMEEHRTIAASRTGPMSAVYRAALASNASQECNPFSGHQCEVAINGFGTVGEVQYTFNNSRENLQGNSTQVMVACRCIGQGKNSAECGVALLVRPITLTRVGADGEREETGRHVCIYEAVGEKFSDCHSELVRLSTRPAGTKPEYWRHPLN--FTYEVPDPISGD-YWRADGQRGWTHDCEEAEFDALPEYNISN--------------LRREDLRFNNHTTPAGKGGYCRPPEGVQYYRDVAEGSDDECAELYDFAAPSSAHIATQQDEIAVGQDPHTYISEKTPLTSYTELALSVSAACLGVLFAWSMYRKIMKKKNAEQPVKYFLVGLLKQVMSYALEALPLHIALAHEVGCRHWWSQFAFMDATITLAHGFTGAQGSARDSMLVITAVMGEVEYLYTNESLLALITALFDLIAIAI 466          
BLAST of Gchil7697.t1 vs. uniprot
Match: R7QCE4_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QCE4_CHOCR)

HSP 1 Score: 178 bits (452), Expect = 6.670e-47
Identity = 119/347 (34.29%), Postives = 177/347 (51.01%), Query Frame = 0
Query:  165 ACRCMG-----DDCNKAVLMRPVNITERNEDGTIHLTGKKSCIYQVFEGKFTDCHSETLRMQRK------ERVDHTINGLFIFEVDAMQHGHGSWTAVGHRGWDYSCVEEDFYSLPTVNMSSMVNNISSEIQVYPRLRRGELPSQNQSED------CKPPPNVMYFRDAEEREGEECGASFQFAMASASFLGSQMDEVAVGKDKRTYLKEPPEILVFWEIMVLVCAASLGLYFAISACTKF--KKKNQWTVQRVLKLVAVLLMSLLFEAMPLHFALSFEVKALQWIGRFAYLGATVALGKDVVQPQSAVHGNILVLTAIVGESRFVSTSLLAVAMLSAFINVASLLI 492
            ACRC+G     ++C  A+L+RP+ +T    DG    TG+  CIY+    KF+DCHSE +R+  +      E   H  N  F ++V     G   W A G RGW + C E +F +LP  N+S               LRRG+L     +        C+PP  V Y+RD  E   +EC A + FA  +AS  G+Q DE+A+G D  TYL E   +  + EI + + AA LGL  A S   K       +  ++  L  +  L++S   EA+PLH AL+ EV+   W   FA++ A+V L       + +   ++LVLTA+VGE  F++T  + +A  +A  +V +L+I
Sbjct:    3 ACRCIGQGEDSNECGVALLVRPITLTRVGADGEREETGRHVCIYEAVGEKFSDCHSELVRLSTRPAGTKPEYGRHPYN--FTYKVPDRISGD-YWRADGQRGWMHDCGEAEFDALPKYNISG--------------LRRGDLRFHKHTTPAEKGGYCRPPEGVQYYRDEAEGSDDECAALYDFAAPAASNRGTQQDEIAIGMDLSTYLAEKIPLTTYTEIALSLSAACLGLLLAWSMHKKIITNMNAEQPIKYFLVSLLKLVLSYALEALPLHIALAEEVRCRDWRSLFAFMDASVTLAHGFKGSRGSAKDSLLVLTAVVGEVEFLTTHEIFLACCTALFDVTALVI 332          
The following BLAST results are available for this feature:
BLAST of Gchil7697.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2V3IVV5_9FLOR8.300e-15750.10Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7QFH7_CHOCR9.180e-8036.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
R7QCE4_CHOCR6.670e-4734.29Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 528..555
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..361
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 402..421
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 422..474
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 503..555
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 383..401
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 362..382
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 475..502
NoneNo IPR availableTMHMMTMhelixcoord: 361..383
NoneNo IPR availableTMHMMTMhelixcoord: 475..497
NoneNo IPR availableTMHMMTMhelixcoord: 399..421
NoneNo IPR availableTMHMMTMhelixcoord: 20..39

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:339821..341488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7697.t1Gchil7697.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 339821..341488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7697.t1 ID=Gchil7697.t1|Name=Gchil7697.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=556bp
MLTSRRLSRPGVWFSAKHIVLVFSFINVFVLLGITVLALRSTVSQTRRTP
TRSKNDVLPRHVNNDLGPSGTLTILDRLRDAVGTAVQTWGFGPGRKHDIR
HALASGPMPFVFRDTISAFSQPQCQQLGQQCELASHGFGTVGVVRYQFLG
QRENIAGTSIQVQTACRCMGDDCNKAVLMRPVNITERNEDGTIHLTGKKS
CIYQVFEGKFTDCHSETLRMQRKERVDHTINGLFIFEVDAMQHGHGSWTA
VGHRGWDYSCVEEDFYSLPTVNMSSMVNNISSEIQVYPRLRRGELPSQNQ
SEDCKPPPNVMYFRDAEEREGEECGASFQFAMASASFLGSQMDEVAVGKD
KRTYLKEPPEILVFWEIMVLVCAASLGLYFAISACTKFKKKNQWTVQRVL
KLVAVLLMSLLFEAMPLHFALSFEVKALQWIGRFAYLGATVALGKDVVQP
QSAVHGNILVLTAIVGESRFVSTSLLAVAMLSAFINVASLLILSGVICTF
FIKQRRSAQNEPLSDDITSALKTGKSEDETRFSSSSLMSVSFDSHGGDEM
NELER*
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