Gchil7754.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7754.t1
Unique NameGchil7754.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length448
Homology
BLAST of Gchil7754.t1 vs. uniprot
Match: UPI001E1D3E38 (uncharacterized protein LOC123544752 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D3E38)

HSP 1 Score: 181 bits (458), Expect = 3.720e-47
Identity = 115/285 (40.35%), Postives = 152/285 (53.33%), Query Frame = 0
Query:  171 IEAICPRTRTFVMDDGSTTPIDLVTNFGKTNQWLTKNQTLGSVLPHPNVIVP------TKMPVTDVLGVLEPEEG--EENDDVDTARVEPEFQYSDTQSTQPKGLETKASLPGTDDVDLMKELEKLDLEYVPEAHREKLREMLKESTAMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFVCH 447
            I+ IC R    V           V NFG    +L KN  +G   PHP  I+       T +P  D+  ++E EE   E ND  +  +V+ E          PK    +  LP             L  E+     +EK+  +L+  + MWDGSLG I  T+HRI  +  ++P+  H YRAGPKA++ E+ +VE+ML+A VIEP  S WASPVVL PK DG  R C+DYR LN++TVK  YP+ RMDE ID L +A  F+ L  N GY Q P+ +EDRDKT F  H
Sbjct:  228 IQDICSRVPFLVK----------VANFGGDEIFLPKNAVIGYAFPHPTCIISLVGEDDTNVP--DLPDLVEEEEHPLEANDASEETKVQDEA---------PKSWRDEVDLPT------------LQGEW-----KEKVMTLLERYSHMWDGSLGEIKATKHRIQLIPGSKPVHSHPYRAGPKAREMERQEVERMLKADVIEPACSEWASPVVLVPKPDGSLRFCVDYRKLNSITVKDTYPLPRMDESIDSLGDAAIFSTLDCNSGYWQIPINEEDRDKTTFTSH 474          
BLAST of Gchil7754.t1 vs. uniprot
Match: UPI001E1DEA69 (uncharacterized protein LOC123544193 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DEA69)

HSP 1 Score: 178 bits (451), Expect = 1.150e-46
Identity = 130/438 (29.68%), Postives = 196/438 (44.75%), Query Frame = 0
Query:   61 DRVLVMAKRNYKGYEDLGLSHQFMVRQLSVLDTGAAPNLINADIIPSTLRNYIFYGPGMD-IADANNNPLQTIGNISLAVRLGTYLVQLDFIVCDSIAAPVTLGCDFCDRFIEAICPRTRTFVMDDGS----TTPIDLVTNFGKTNQWLTKNQTLGSVLPHPNVIVPTKMPV-----TDVLGVLEPEEGEENDDVDTA------RVEPEFQY-----SDTQSTQPKGLETKASL----------PGTD--------DVDLMKELEKLD------------LEYVPEAHREKLREMLKESTAMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFVCH 447
            + V +    NYK    +G +   +    +VLDTGA  NL+  D++P      +  G  +  I +A+   +   G I L V++G  + ++ F V   +  P  LGC F +  +  I P+ R   +++G     T+ +        T + +  N+    V      ++P +        T + G+        +  V  A      R    F+      SD   T  KG+   ++           PG +        D D    +E+ +            L+++    R+ +  ML+    MWDG LGT+  T HRI      +P+    YRAG +A+  E+ ++++ML   VIEP    WASP+VL PK DG  R C+DYR LNA+TV   YP+ RMDE ID L +A  FT L  N GY Q PV  EDRDKT F  H
Sbjct:   52 ESVFLFKSHNYKLCVSIGATAAVLYPLQAVLDTGAGINLVRDDVLPENWERMLLPGVALPRITNASGRRMPARGVIILYVQVGNLVKRVRFYVTPGLGVPCILGCTFINLHVRNIHPKERRVDLNEGGSIAITSGVSACHAVTPTREIIPSNK----VRIAQRTVIPARCEAHVAVTTAITGLCLLTHSSRSQVVSLASGVADVRSNVPFRVRLLNPSDRSITLSKGMVVGSATLRPQRIITVDPGVETLITQADKDCDPTSSMEQTEPPPPTSWKDDVRLDHLELEERQAVLRMLEPHHKMWDGHLGTVAATSHRIEVTAGAKPVHCQPYRAGSRARSAEKEEIDRMLAEHVIEPATCEWASPIVLVPKPDGSLRFCVDYRRLNAITVPDTYPLPRMDECIDSLGDAVVFTTLDCNSGYWQIPVHPEDRDKTTFTSH 485          
BLAST of Gchil7754.t1 vs. uniprot
Match: R7QIA9_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QIA9_CHOCR)

HSP 1 Score: 163 bits (413), Expect = 1.600e-41
Identity = 90/217 (41.47%), Postives = 127/217 (58.53%), Query Frame = 0
Query:  193 LVTNFGKTNQWLTKNQTLGSVLPHPNVIVPTKMPVTDVLGVLEPEEGEENDDVDTARVEPEFQYSDTQSTQPKGLETKASLPGTDDVDLMKELEKLDLEYVPEAHREKLREMLKESTAMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDE 409
            LV NFG     L K QT+G++LPHP  ++ +K+ V  +L + + E  E   D D    +  +   +T  T              DDVD+          +VP  HR++++ ML + ++MW G LG I +T+H I  +  TRPIA + YRAGP A++ E  +V+ MLRAGV+EP++S WASPV L PK DG  R C+DYR LNAVT++  YP+ RMDE
Sbjct:   33 LVANFGIAPYRLVKGQTIGTLLPHPTAVIVSKVSVAAMLDLTDEEANEVQQDFDK---DANWAVENTSMTS-----------NPDDVDIS---------HVPARHRDQIKAMLLKYSSMWSGELGEIKVTKHHIDTMTGTRPIAQNPYRAGPHAREAEMKEVDCMLRAGVLEPSKSAWASPVALLPKKDGQLRFCVDYRRLNAVTIRDSYPLPRMDE 226          
BLAST of Gchil7754.t1 vs. uniprot
Match: UPI001E1DB02D (uncharacterized protein LOC123543982 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DB02D)

HSP 1 Score: 159 bits (402), Expect = 1.430e-39
Identity = 81/175 (46.29%), Postives = 109/175 (62.29%), Query Frame = 0
Query:  273 LPGTDDVDLMKELEKLDLEYVPEAHREKLREMLKESTAMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFVCH 447
            LP   DV+     E + L ++    R K+ +ML +  +MW G LG +  T HRI  +   +P+    YRAGP+A+  E +++++ML+A VIEP  S WASP+VL  K DG  R C+DYR LNA+TV+  YP+ RMDE ID L +A  FT L  N GY Q PVR+EDR+KT F  H
Sbjct:  310 LPDRPDVEGDTWQEAVQLGHLQGEERAKILDMLAKHRSMWSGKLGQVQSTNHRIDLIPGQKPVHCQPYRAGPRARAVESAEIQRMLKAQVIEPATSEWASPIVLVAKPDGSTRFCVDYRRLNAITVRDSYPLPRMDECIDSLGDAKIFTTLDCNSGYWQIPVRQEDREKTTFTSH 484          
BLAST of Gchil7754.t1 vs. uniprot
Match: R7QJR5_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QJR5_CHOCR)

HSP 1 Score: 127 bits (318), Expect = 8.170e-31
Identity = 74/164 (45.12%), Postives = 94/164 (57.32%), Query Frame = 0
Query:  284 ELEKLDLEYVPEAHREKLREMLKESTAMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFVCH 447
            ++E+LDL +VP+  RE+ R M K+ + +WDG+LG I  T HRI  +  TRPIA   YRAGPK  + E ++V+KML AGVIEP Q                         L AVTVK  YP+ RMDE  D L +   F+ L A  GY Q P+ + DRDKTAF CH
Sbjct:   36 DVEELDLSHVPDRLRERFRRMSKKYSRVWDGTLGEIYTTVHRIELIPETRPIAKAPYRAGPKVCEIEDAEVQKMLEAGVIEPAQ-------------------------LKAVTVKDTYPLPRMDECRDSLGDTKVFSALDAISGYWQMPIPECDRDKTAFSCH 174          
BLAST of Gchil7754.t1 vs. uniprot
Match: A0A164FP21_9CRUS (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A164FP21_9CRUS)

HSP 1 Score: 121 bits (304), Expect = 1.470e-28
Identity = 71/169 (42.01%), Postives = 97/169 (57.40%), Query Frame = 0
Query:  280 DLMKELEKLDLEYVPEAHREKLREMLKEST---AMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFV 445
            +L+K LE    E + +  +EK  ++LK+     A+ +  LG   + +H I      RPI    Y++G K +   Q QVE MLR  V+EP+ SPW+SPVVL  K DG WR C+DYR LN+VTVK  YP+ R+ + +  LE A  F+      GY Q PV   DR KTAF+
Sbjct:   25 ELLKHLEGRIGENLTKEEKEKTVKILKQFAHCFALNEDDLGYCSVVKHDIN-TAKARPIHQLPYKSGWKERAVIQDQVEGMLRRRVVEPSDSPWSSPVVLVKKKDGTWRFCVDYRKLNSVTVKDSYPLPRIADTLSRLEGAIFFSSKDLQSGYHQVPVIDSDRPKTAFI 192          
BLAST of Gchil7754.t1 vs. uniprot
Match: A0A822DL81_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 TaxID=2762511 RepID=A0A822DL81_9BILA)

HSP 1 Score: 121 bits (304), Expect = 1.590e-28
Identity = 61/149 (40.94%), Postives = 91/149 (61.07%), Query Frame = 0
Query:  299 EKLREMLKESTAMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFVCH 447
            E+L+ +  +    ++ +LG   + +H I    NT+PI    YR  P  ++    ++ KML AG+IEP  SP+A+P+ L PK DG  R CIDYR LN+VTV+ VYPI R+D+ +D L+NA  F+ ++   G+ Q  +    RDKTAF+ H
Sbjct:    8 EQLKSIHDKYYTCFEDTLGRTSLVQHHID-TGNTKPIKLRPYRVSPYRKEMISHEITKMLNAGIIEPCASPYAAPITLQPKKDGSLRFCIDYRELNSVTVRDVYPIPRIDDTLDQLQNAKYFSSMYLRSGFWQIELDPASRDKTAFISH 155          
BLAST of Gchil7754.t1 vs. uniprot
Match: R7QMC5_CHOCR (Integrase catalytic domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QMC5_CHOCR)

HSP 1 Score: 129 bits (324), Expect = 1.830e-28
Identity = 69/150 (46.00%), Postives = 85/150 (56.67%), Query Frame = 0
Query:  298 REKLREMLKESTAMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFVCH 447
            R ++ +ML E   MW G LG I  T+H I      +PI    YRAGP A+++E+ +++ MLRAGVIEPT + WASPV   PK DG    C+DYR LNAVTV+  YP  RMDE ID L +AT                   DRDKT F  H
Sbjct:  138 RSEIMDMLSEFKDMWSGHLGKIDATKHHIELKPGGKPIYQAPYRAGPIAREKEKKEIDGMLRAGVIEPTSAEWASPVAFVPKKDGTMPFCVDYRKLNAVTVRDSYPQPRMDECIDSLGDAT-------------------DRDKTTFASH 268          
BLAST of Gchil7754.t1 vs. uniprot
Match: R7QHJ7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QHJ7_CHOCR)

HSP 1 Score: 121 bits (303), Expect = 2.390e-28
Identity = 59/114 (51.75%), Postives = 76/114 (66.67%), Query Frame = 0
Query:  311 MWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLH 424
            MW G LG IG T+HRI      R I    Y AGP A+++E++++++MLRAGVIEP  + WASPVV   K +G  R C+DYR LNAVTV+  YP+LRMDE I+ L +AT     H
Sbjct:    1 MWTGQLGKIGATKHRIELEPGARQIYKAPYPAGPTAREKEKTEIDRMLRAGVIEPATAEWASPVVFVRKKEGTMRFCVDYRTLNAVTVRDSYPLLRMDECINSLGDATTTFASH 114          
BLAST of Gchil7754.t1 vs. uniprot
Match: A0A6G5ABV7_RHIMP (Putative tick transposon n=1 Tax=Rhipicephalus microplus TaxID=6941 RepID=A0A6G5ABV7_RHIMP)

HSP 1 Score: 123 bits (309), Expect = 3.080e-28
Identity = 66/153 (43.14%), Postives = 92/153 (60.13%), Query Frame = 0
Query:  295 EAHREKLREMLKESTAMWDGS--LGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEEQSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKYVYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFV 445
            EA++++L E+L E    +  S  +    IT+HRI    +  PI    Y   P  +   Q+QV++ML+ GVI+P+ SPW+SPVVL  K DG  R C+DYR LN VT K VYP+ R+D+ +D L  A  F+ +    GY Q  V + DR+KTAFV
Sbjct:   89 EANKQRLSELLLEFDTCFARSSKIRQTPITKHRIITYDDAHPIRQQAYHVSPTERHAIQTQVKEMLQDGVIQPSSSPWSSPVVLVKKKDGTLRFCVDYRKLNNVTKKDVYPLPRVDDSLDKLRRAKYFSSVDLKSGYWQIEVDERDREKTAFV 241          
The following BLAST results are available for this feature:
BLAST of Gchil7754.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001E1D3E383.720e-4740.35uncharacterized protein LOC123544752 n=1 Tax=Merce... [more]
UPI001E1DEA691.150e-4629.68uncharacterized protein LOC123544193 n=1 Tax=Merce... [more]
R7QIA9_CHOCR1.600e-4141.47Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
UPI001E1DB02D1.430e-3946.29uncharacterized protein LOC123543982 n=1 Tax=Merce... [more]
R7QJR5_CHOCR8.170e-3145.12Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A164FP21_9CRUS1.470e-2842.01Reverse transcriptase domain-containing protein (F... [more]
A0A822DL81_9BILA1.590e-2840.94Hypothetical protein n=1 Tax=Rotaria sp. Silwood1 ... [more]
R7QMC5_CHOCR1.830e-2846.00Integrase catalytic domain-containing protein n=1 ... [more]
R7QHJ7_CHOCR2.390e-2851.75Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A6G5ABV7_RHIMP3.080e-2843.14Putative tick transposon n=1 Tax=Rhipicephalus mic... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR043128Reverse transcriptase/Diguanylate cyclase domainGENE3D3.30.70.270coord: 402..429
e-value: 2.7E-34
score: 120.3
NoneNo IPR availableGENE3D3.10.10.10HIV Type 1 Reverse Transcriptase, subunit A, domain 1coord: 323..447
e-value: 2.7E-34
score: 120.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 253..267
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 236..267
NoneNo IPR availablePANTHERPTHR24559:SF363SUBFAMILY NOT NAMEDcoord: 318..444
NoneNo IPR availablePANTHERPTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINcoord: 318..444
NoneNo IPR availableCDDcd01647RT_LTRcoord: 361..447
e-value: 8.88198E-32
score: 117.696
IPR043502DNA/RNA polymerase superfamilySUPERFAMILY56672DNA/RNA polymerasescoord: 310..447

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025321_piloncontigtig00025321_pilon:909113..910710 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7754.t1Gchil7754.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025321_pilon 909113..910710 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7754.t1 ID=Gchil7754.t1|Name=Gchil7754.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=448bp
MGVSPDGRASSKLSLRTPESSPPHSAVTILTKNMAKTDVDSEHLAVLGRP
WIQFRNPRTPDRVLVMAKRNYKGYEDLGLSHQFMVRQLSVLDTGAAPNLI
NADIIPSTLRNYIFYGPGMDIADANNNPLQTIGNISLAVRLGTYLVQLDF
IVCDSIAAPVTLGCDFCDRFIEAICPRTRTFVMDDGSTTPIDLVTNFGKT
NQWLTKNQTLGSVLPHPNVIVPTKMPVTDVLGVLEPEEGEENDDVDTARV
EPEFQYSDTQSTQPKGLETKASLPGTDDVDLMKELEKLDLEYVPEAHREK
LREMLKESTAMWDGSLGTIGITEHRIFFLLNTRPIAHHTYRAGPKAQQEE
QSQVEKMLRAGVIEPTQSPWASPVVLAPKADGLWRICIDYRCLNAVTVKY
VYPILRMDEYIDPLENATAFTDLHANWGYSQGPVRKEDRDKTAFVCH*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR043128Rev_trsase/Diguanyl_cyclase
IPR043502DNA/RNA_pol_sf