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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
| Seed ortholog | 78898.MVEG_04007T0 |
| PFAMs | ArgoL1,ArgoL2,ArgoMid,ArgoN,PAZ,Piwi |
| Max annot lvl | 4751|Fungi |
| Evalue | 1.95e-124 |
| EggNOG OGs | KOG1041@1|root,KOG1041@2759|Eukaryota,38CFV@33154|Opisthokonta,3NU0D@4751|Fungi,1GSVJ@112252|Fungi incertae sedis |
| Description | Mortierella verticillata NRRL 6337 |
| COG category | J |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil2042.t1 ID=Gchil2042.t1|Name=Gchil2042.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=863bp MSSSSSRVPNFRDKPMRRPAYGKVGRPINIEANFVLMSIPKHLKASQYSV QLFRDKTEKGRTSRREVSASEPILFNRNCFKLLLERHGDELGCRLAYDGR SIAYAPTEINRQALEVRFRLKVNKEGERPSREDSSETVEIMLSHAKYLNY DDLASGAVDRTATSEYISCLDVVLAQAAAVGHVQVGRSFYNSNGAVPLGR RYITSSAWTGFYQSARISEMGLVVNMDESFTAFWNRGGRPLSDLILDAND GQALRCNDSRALRNVAQKLKGLKVKAGHTGIVYRVHGFSERGADRITFDS EGRRVSVSQYFHDAYNMRVKHGSSPCVKTHPKRDTYLPIEFLTVVPNQRV AGLLSQDEIQTMVRTASTKPHIRRQNALRKIQEIKHHSHPTCKDFRAKVE PKLIRLKARVLPPPTIRYAKGDVSPSNGQWRAKNGVANPAQIFSWAICSM ARLGKDEVQSFAKDLKAAMGRAGLQLRMSLPKLYRCDERDIDREMQRISD EFKRDKSLNMRKPFLQLLIIIKERQDSTVYNMIKREGDLNLGIVTQVCLA KHCGSRARGRDMYCDNVVLKINAKLGGQNGLPVAYGKSAPVPDVSFLDIP HIVLGADVTHPMPGGRGPSIAALVGSRDRQGLQFSSSLRTQAARQEMISE IGEMFKEVYQVWFNNFGRKVHAQKIIMFRDGVSEGQFEEVMQRELQAIRG ACVQIGDKMRPNITYIIVTKRHHARFFPGGREHSDGKSGNIPPGTVVDSG VTSREYYDFYLNSHAGIQGTNKPSKYTVLIDENKIQPDALYGYIYRLSHS FARCNRPVSMVHSAYYAHLLAFRGRAYMGDDMSDTNSHASSSSRVPAAPM AHGLLKGHLYFV* back to topspliced messenger RNA >Gchil2042.t1 ID=Gchil2042.t1|Name=Gchil2042.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2589bp|location=Sequence derived from alignment at tig00000019_pilon:240083..242671- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGAGCAGTTCCAGCTCCAGGGTGCCAAACTTTCGCGATAAGCCCATGCG CAGACCTGCCTATGGCAAAGTAGGCAGGCCCATAAACATCGAGGCCAACT TTGTTCTTATGAGTATTCCCAAGCATCTAAAGGCTTCTCAGTATTCCGTG CAACTATTTCGTGATAAGACCGAGAAAGGCAGAACTAGTAGACGCGAAGT GAGTGCATCGGAGCCCATTTTGTTCAACCGCAACTGTTTCAAGCTTCTAT TGGAGAGACACGGTGACGAATTGGGTTGTCGACTCGCATACGACGGACGC TCCATTGCGTATGCACCTACGGAAATCAATCGCCAGGCCCTAGAAGTTCG CTTTAGGCTGAAGGTCAACAAGGAAGGGGAGAGACCCTCCAGAGAAGACT CGTCTGAGACCGTTGAGATCATGCTTAGCCATGCAAAGTACCTCAACTAT GATGATCTAGCCTCTGGAGCCGTTGATAGAACTGCTACATCAGAGTACAT ATCTTGTCTAGACGTCGTGCTGGCGCAAGCCGCTGCCGTGGGCCATGTTC AGGTTGGTCGTTCGTTCTACAACTCAAACGGCGCAGTGCCTCTCGGCCGC CGTTATATCACCAGCAGTGCGTGGACGGGCTTCTATCAAAGTGCTCGCAT TTCCGAAATGGGTTTGGTAGTCAACATGGATGAATCTTTTACAGCCTTTT GGAACCGGGGGGGAAGACCTCTCTCGGATCTCATCCTTGATGCCAATGAC GGGCAGGCCCTTCGATGTAATGACTCCAGAGCATTACGGAACGTTGCCCA GAAACTGAAGGGTCTCAAGGTGAAAGCTGGTCACACTGGAATTGTGTACA GAGTCCACGGGTTCTCAGAGCGAGGGGCAGACCGCATCACTTTTGACTCT GAAGGCCGCAGAGTTTCTGTCAGCCAGTATTTTCATGATGCTTATAACAT GAGGGTCAAGCACGGAAGTTCTCCATGCGTTAAAACGCACCCCAAGAGAG ACACGTATCTTCCCATCGAGTTTCTTACTGTCGTTCCGAACCAGCGCGTA GCCGGACTCCTATCGCAGGATGAAATACAGACAATGGTGAGGACTGCCAG CACCAAACCTCATATTCGGAGGCAAAATGCACTGAGAAAGATTCAAGAAA TCAAGCACCATAGTCATCCCACATGCAAGGATTTCCGCGCTAAGGTCGAG CCCAAGCTCATCAGATTGAAGGCTCGCGTTTTGCCCCCGCCGACCATTAG GTATGCAAAAGGTGATGTGTCTCCCTCAAACGGTCAATGGAGAGCAAAGA ATGGTGTTGCGAATCCCGCACAGATTTTCTCGTGGGCCATTTGCAGTATG GCTCGGTTGGGCAAGGACGAGGTCCAGTCGTTTGCTAAAGACCTGAAAGC AGCTATGGGAAGAGCTGGACTTCAACTTCGAATGTCGCTGCCTAAACTAT ACCGCTGTGATGAAAGGGACATAGACCGAGAGATGCAGCGCATCAGTGAT GAATTCAAGAGAGATAAATCCCTTAACATGCGAAAACCATTTCTCCAACT TCTCATCATCATCAAGGAAAGACAGGATTCCACGGTCTACAACATGATCA AGAGAGAGGGTGATCTCAATCTTGGCATCGTTACCCAAGTTTGTCTGGCG AAGCACTGCGGCTCAAGGGCAAGAGGGCGGGACATGTATTGTGACAACGT TGTTCTGAAGATCAATGCGAAACTTGGCGGTCAGAATGGTCTTCCTGTTG CTTATGGAAAGAGCGCCCCTGTACCCGATGTCAGCTTTCTTGATATTCCT CACATTGTTCTTGGAGCTGATGTTACTCATCCAATGCCCGGAGGAAGGGG ACCGAGCATTGCTGCACTAGTTGGCTCTCGAGACCGCCAAGGTCTGCAAT TTTCTTCTTCTCTTCGCACTCAAGCAGCCCGGCAGGAAATGATCTCTGAG ATTGGAGAAATGTTCAAAGAAGTATACCAAGTGTGGTTCAATAACTTCGG GAGGAAGGTGCATGCACAAAAGATCATCATGTTCCGGGATGGAGTATCCG AGGGGCAGTTCGAAGAGGTCATGCAACGCGAACTACAAGCAATTCGCGGA GCGTGCGTTCAGATCGGAGATAAGATGCGACCGAACATCACCTACATTAT TGTTACAAAGCGTCACCACGCACGGTTCTTTCCCGGTGGGAGAGAACATT CTGATGGAAAGTCTGGAAACATCCCACCTGGAACTGTTGTGGACTCGGGA GTAACGAGCAGGGAGTACTATGACTTTTACTTGAATTCGCATGCTGGAAT TCAAGGCACGAACAAACCATCCAAGTACACTGTACTTATCGATGAGAATA AGATACAGCCGGATGCCTTGTACGGATACATTTATCGTCTATCTCACTCA TTTGCGAGGTGTAACCGCCCCGTTTCCATGGTGCACAGTGCTTATTACGC ACATCTGTTGGCGTTCCGCGGACGAGCGTACATGGGCGATGACATGTCTG ATACTAACTCGCATGCTTCCAGTAGCTCTCGAGTTCCGGCAGCGCCGATG GCGCACGGTTTGTTGAAAGGTCACCTCTACTTTGTGTAG back to topprotein sequence of Gchil2042.t1 >Gchil2042.t1 ID=Gchil2042.t1|Name=Gchil2042.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=863bp
MSSSSSRVPNFRDKPMRRPAYGKVGRPINIEANFVLMSIPKHLKASQYSV QLFRDKTEKGRTSRREVSASEPILFNRNCFKLLLERHGDELGCRLAYDGR SIAYAPTEINRQALEVRFRLKVNKEGERPSREDSSETVEIMLSHAKYLNY DDLASGAVDRTATSEYISCLDVVLAQAAAVGHVQVGRSFYNSNGAVPLGR RYITSSAWTGFYQSARISEMGLVVNMDESFTAFWNRGGRPLSDLILDAND GQALRCNDSRALRNVAQKLKGLKVKAGHTGIVYRVHGFSERGADRITFDS EGRRVSVSQYFHDAYNMRVKHGSSPCVKTHPKRDTYLPIEFLTVVPNQRV AGLLSQDEIQTMVRTASTKPHIRRQNALRKIQEIKHHSHPTCKDFRAKVE PKLIRLKARVLPPPTIRYAKGDVSPSNGQWRAKNGVANPAQIFSWAICSM ARLGKDEVQSFAKDLKAAMGRAGLQLRMSLPKLYRCDERDIDREMQRISD EFKRDKSLNMRKPFLQLLIIIKERQDSTVYNMIKREGDLNLGIVTQVCLA KHCGSRARGRDMYCDNVVLKINAKLGGQNGLPVAYGKSAPVPDVSFLDIP HIVLGADVTHPMPGGRGPSIAALVGSRDRQGLQFSSSLRTQAARQEMISE IGEMFKEVYQVWFNNFGRKVHAQKIIMFRDGVSEGQFEEVMQRELQAIRG ACVQIGDKMRPNITYIIVTKRHHARFFPGGREHSDGKSGNIPPGTVVDSG VTSREYYDFYLNSHAGIQGTNKPSKYTVLIDENKIQPDALYGYIYRLSHS FARCNRPVSMVHSAYYAHLLAFRGRAYMGDDMSDTNSHASSSSRVPAAPM AHGLLKGHLYFV* back to topmRNA from alignment at tig00000019_pilon:240083..242671- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil2042.t1 ID=Gchil2042.t1|Name=Gchil2042.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=2589bp|location=Sequence derived from alignment at tig00000019_pilon:240083..242671- (Gracilaria chilensis NLEC103_M9 male) ATGAGCAGTTCCAGCTCCAGGGTGCCAAACTTTCGCGATAAGCCCATGCG
CAGACCTGCCTATGGCAAAGTAGGCAGGCCCATAAACATCGAGGCCAACT
TTGTTCTTATGAGTATTCCCAAGCATCTAAAGGCTTCTCAGTATTCCGTG
CAACTATTTCGTGATAAGACCGAGAAAGGCAGAACTAGTAGACGCGAAGT
GAGTGCATCGGAGCCCATTTTGTTCAACCGCAACTGTTTCAAGCTTCTAT
TGGAGAGACACGGTGACGAATTGGGTTGTCGACTCGCATACGACGGACGC
TCCATTGCGTATGCACCTACGGAAATCAATCGCCAGGCCCTAGAAGTTCG
CTTTAGGCTGAAGGTCAACAAGGAAGGGGAGAGACCCTCCAGAGAAGACT
CGTCTGAGACCGTTGAGATCATGCTTAGCCATGCAAAGTACCTCAACTAT
GATGATCTAGCCTCTGGAGCCGTTGATAGAACTGCTACATCAGAGTACAT
ATCTTGTCTAGACGTCGTGCTGGCGCAAGCCGCTGCCGTGGGCCATGTTC
AGGTTGGTCGTTCGTTCTACAACTCAAACGGCGCAGTGCCTCTCGGCCGC
CGTTATATCACCAGCAGTGCGTGGACGGGCTTCTATCAAAGTGCTCGCAT
TTCCGAAATGGGTTTGGTAGTCAACATGGATGAATCTTTTACAGCCTTTT
GGAACCGGGGGGGAAGACCTCTCTCGGATCTCATCCTTGATGCCAATGAC
GGGCAGGCCCTTCGATGTAATGACTCCAGAGCATTACGGAACGTTGCCCA
GAAACTGAAGGGTCTCAAGGTGAAAGCTGGTCACACTGGAATTGTGTACA
GAGTCCACGGGTTCTCAGAGCGAGGGGCAGACCGCATCACTTTTGACTCT
GAAGGCCGCAGAGTTTCTGTCAGCCAGTATTTTCATGATGCTTATAACAT
GAGGGTCAAGCACGGAAGTTCTCCATGCGTTAAAACGCACCCCAAGAGAG
ACACGTATCTTCCCATCGAGTTTCTTACTGTCGTTCCGAACCAGCGCGTA
GCCGGACTCCTATCGCAGGATGAAATACAGACAATGGTGAGGACTGCCAG
CACCAAACCTCATATTCGGAGGCAAAATGCACTGAGAAAGATTCAAGAAA
TCAAGCACCATAGTCATCCCACATGCAAGGATTTCCGCGCTAAGGTCGAG
CCCAAGCTCATCAGATTGAAGGCTCGCGTTTTGCCCCCGCCGACCATTAG
GTATGCAAAAGGTGATGTGTCTCCCTCAAACGGTCAATGGAGAGCAAAGA
ATGGTGTTGCGAATCCCGCACAGATTTTCTCGTGGGCCATTTGCAGTATG
GCTCGGTTGGGCAAGGACGAGGTCCAGTCGTTTGCTAAAGACCTGAAAGC
AGCTATGGGAAGAGCTGGACTTCAACTTCGAATGTCGCTGCCTAAACTAT
ACCGCTGTGATGAAAGGGACATAGACCGAGAGATGCAGCGCATCAGTGAT
GAATTCAAGAGAGATAAATCCCTTAACATGCGAAAACCATTTCTCCAACT
TCTCATCATCATCAAGGAAAGACAGGATTCCACGGTCTACAACATGATCA
AGAGAGAGGGTGATCTCAATCTTGGCATCGTTACCCAAGTTTGTCTGGCG
AAGCACTGCGGCTCAAGGGCAAGAGGGCGGGACATGTATTGTGACAACGT
TGTTCTGAAGATCAATGCGAAACTTGGCGGTCAGAATGGTCTTCCTGTTG
CTTATGGAAAGAGCGCCCCTGTACCCGATGTCAGCTTTCTTGATATTCCT
CACATTGTTCTTGGAGCTGATGTTACTCATCCAATGCCCGGAGGAAGGGG
ACCGAGCATTGCTGCACTAGTTGGCTCTCGAGACCGCCAAGGTCTGCAAT
TTTCTTCTTCTCTTCGCACTCAAGCAGCCCGGCAGGAAATGATCTCTGAG
ATTGGAGAAATGTTCAAAGAAGTATACCAAGTGTGGTTCAATAACTTCGG
GAGGAAGGTGCATGCACAAAAGATCATCATGTTCCGGGATGGAGTATCCG
AGGGGCAGTTCGAAGAGGTCATGCAACGCGAACTACAAGCAATTCGCGGA
GCGTGCGTTCAGATCGGAGATAAGATGCGACCGAACATCACCTACATTAT
TGTTACAAAGCGTCACCACGCACGGTTCTTTCCCGGTGGGAGAGAACATT
CTGATGGAAAGTCTGGAAACATCCCACCTGGAACTGTTGTGGACTCGGGA
GTAACGAGCAGGGAGTACTATGACTTTTACTTGAATTCGCATGCTGGAAT
TCAAGGCACGAACAAACCATCCAAGTACACTGTACTTATCGATGAGAATA
AGATACAGCCGGATGCCTTGTACGGATACATTTATCGTCTATCTCACTCA
TTTGCGAGGTGTAACCGCCCCGTTTCCATGGTGCACAGTGCTTATTACGC
ACATCTGTTGGCGTTCCGCGGACGAGCGTACATGGGCGATGACATGTCTG
ATACTAACTCGCATGCTTCCAGTAGCTCTCGAGTTCCGGCAGCGCCGATG
GCGCACGGTTTGTTGAAAGGTCACCTCTACTTTGTGTAG back to topCoding sequence (CDS) from alignment at tig00000019_pilon:240083..242671- >Gchil2042.t1 ID=Gchil2042.t1|Name=Gchil2042.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=2589bp|location=Sequence derived from alignment at tig00000019_pilon:240083..242671- (Gracilaria chilensis NLEC103_M9 male) ATGAGCAGTTCCAGCTCCAGGGTGCCAAACTTTCGCGATAAGCCCATGCG CAGACCTGCCTATGGCAAAGTAGGCAGGCCCATAAACATCGAGGCCAACT TTGTTCTTATGAGTATTCCCAAGCATCTAAAGGCTTCTCAGTATTCCGTG CAACTATTTCGTGATAAGACCGAGAAAGGCAGAACTAGTAGACGCGAAGT GAGTGCATCGGAGCCCATTTTGTTCAACCGCAACTGTTTCAAGCTTCTAT TGGAGAGACACGGTGACGAATTGGGTTGTCGACTCGCATACGACGGACGC TCCATTGCGTATGCACCTACGGAAATCAATCGCCAGGCCCTAGAAGTTCG CTTTAGGCTGAAGGTCAACAAGGAAGGGGAGAGACCCTCCAGAGAAGACT CGTCTGAGACCGTTGAGATCATGCTTAGCCATGCAAAGTACCTCAACTAT GATGATCTAGCCTCTGGAGCCGTTGATAGAACTGCTACATCAGAGTACAT ATCTTGTCTAGACGTCGTGCTGGCGCAAGCCGCTGCCGTGGGCCATGTTC AGGTTGGTCGTTCGTTCTACAACTCAAACGGCGCAGTGCCTCTCGGCCGC CGTTATATCACCAGCAGTGCGTGGACGGGCTTCTATCAAAGTGCTCGCAT TTCCGAAATGGGTTTGGTAGTCAACATGGATGAATCTTTTACAGCCTTTT GGAACCGGGGGGGAAGACCTCTCTCGGATCTCATCCTTGATGCCAATGAC GGGCAGGCCCTTCGATGTAATGACTCCAGAGCATTACGGAACGTTGCCCA GAAACTGAAGGGTCTCAAGGTGAAAGCTGGTCACACTGGAATTGTGTACA GAGTCCACGGGTTCTCAGAGCGAGGGGCAGACCGCATCACTTTTGACTCT GAAGGCCGCAGAGTTTCTGTCAGCCAGTATTTTCATGATGCTTATAACAT GAGGGTCAAGCACGGAAGTTCTCCATGCGTTAAAACGCACCCCAAGAGAG ACACGTATCTTCCCATCGAGTTTCTTACTGTCGTTCCGAACCAGCGCGTA GCCGGACTCCTATCGCAGGATGAAATACAGACAATGGTGAGGACTGCCAG CACCAAACCTCATATTCGGAGGCAAAATGCACTGAGAAAGATTCAAGAAA TCAAGCACCATAGTCATCCCACATGCAAGGATTTCCGCGCTAAGGTCGAG CCCAAGCTCATCAGATTGAAGGCTCGCGTTTTGCCCCCGCCGACCATTAG GTATGCAAAAGGTGATGTGTCTCCCTCAAACGGTCAATGGAGAGCAAAGA ATGGTGTTGCGAATCCCGCACAGATTTTCTCGTGGGCCATTTGCAGTATG GCTCGGTTGGGCAAGGACGAGGTCCAGTCGTTTGCTAAAGACCTGAAAGC AGCTATGGGAAGAGCTGGACTTCAACTTCGAATGTCGCTGCCTAAACTAT ACCGCTGTGATGAAAGGGACATAGACCGAGAGATGCAGCGCATCAGTGAT GAATTCAAGAGAGATAAATCCCTTAACATGCGAAAACCATTTCTCCAACT TCTCATCATCATCAAGGAAAGACAGGATTCCACGGTCTACAACATGATCA AGAGAGAGGGTGATCTCAATCTTGGCATCGTTACCCAAGTTTGTCTGGCG AAGCACTGCGGCTCAAGGGCAAGAGGGCGGGACATGTATTGTGACAACGT TGTTCTGAAGATCAATGCGAAACTTGGCGGTCAGAATGGTCTTCCTGTTG CTTATGGAAAGAGCGCCCCTGTACCCGATGTCAGCTTTCTTGATATTCCT CACATTGTTCTTGGAGCTGATGTTACTCATCCAATGCCCGGAGGAAGGGG ACCGAGCATTGCTGCACTAGTTGGCTCTCGAGACCGCCAAGGTCTGCAAT TTTCTTCTTCTCTTCGCACTCAAGCAGCCCGGCAGGAAATGATCTCTGAG ATTGGAGAAATGTTCAAAGAAGTATACCAAGTGTGGTTCAATAACTTCGG GAGGAAGGTGCATGCACAAAAGATCATCATGTTCCGGGATGGAGTATCCG AGGGGCAGTTCGAAGAGGTCATGCAACGCGAACTACAAGCAATTCGCGGA GCGTGCGTTCAGATCGGAGATAAGATGCGACCGAACATCACCTACATTAT TGTTACAAAGCGTCACCACGCACGGTTCTTTCCCGGTGGGAGAGAACATT CTGATGGAAAGTCTGGAAACATCCCACCTGGAACTGTTGTGGACTCGGGA GTAACGAGCAGGGAGTACTATGACTTTTACTTGAATTCGCATGCTGGAAT TCAAGGCACGAACAAACCATCCAAGTACACTGTACTTATCGATGAGAATA AGATACAGCCGGATGCCTTGTACGGATACATTTATCGTCTATCTCACTCA TTTGCGAGGTGTAACCGCCCCGTTTCCATGGTGCACAGTGCTTATTACGC ACATCTGTTGGCGTTCCGCGGACGAGCGTACATGGGCGATGACATGTCTG ATACTAACTCGCATGCTTCCAGTAGCTCTCGAGTTCCGGCAGCGCCGATG GCGCACGGTTTGTTGAAAGGTCACCTCTACTTTGTGTAG back to top
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