Gchil5908.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5908.t1
Unique NameGchil5908.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length660
Homology
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A2V3IWW6_9FLOR (DNA polymerase alpha subunit B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IWW6_9FLOR)

HSP 1 Score: 612 bits (1577), Expect = 8.020e-204
Identity = 335/644 (52.02%), Postives = 426/644 (66.15%), Query Frame = 0
Query:    9 SFKLGGAALPRSLSAIAHSICEQNAITADQLDCKWEAWALANSHSTGLPSEEEFRAFAAHLRQKALKASVFKSTPPPRKSSLLHSPGPTPTRVNNIDEFFNYLSDEAKKEVRVKAEPEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPAQVKPHDVNHLPGDDKQDEQYANRTGSGRVEASLDNSEATPHNPLSRDLLGPIHVQPFTPHQPHT--RYMHNPVLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREV--------KMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDEL-VPQFVLIPALEDVHHDFVCPQPAFRWPFAQ-VEHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLAS-RESDGGTYAEIALPLHNS 639
            SF+LG   LP + + IA +IC +NA++A+QL CKWEAWALAN  ST LP+E++  A AAH+R K+         P P  S LL  P PTPTR++ ID+FF Y+   A+   ++   PE                             P  +  H +  LPGD   D  YA R  SGRVEA   N  +TPHNP++R   GP+ + P+ P    T  RYM++ V QR+  VR   +T+ ++IL R+K  R  +MP LS      GSP  +L+ GRIRTEL+E+D+   A IN  SV+LE EDGH IKL+L R++ NK PFF+ PGM+V+VEGVNTNG+L  VHAIYDNAM  +EQRH  Q K E          ME     + HSQPYA  I+AAGPF+  +NLKYEPL+DLL I++R KP +VILTGPFVE+SH HIS +TP+ ++ +FV R+   L  T++ M    E  +P FV+IPALEDVHH FVCPQP F WP  + ++ NI LCPNPCVL+VS  D ++ SF+G++SLPTL DISADSLC NK DRLG+IVSHMLRQ+SFYP+FPPS++VPLDT FL+RL+I DVDTG TVD+I+VPSKLKAFAKSVDGGAIAVNPG+A+ R  +    A I L L  S
Sbjct:    4 SFRLGELQLPAAHAVIARNICAENALSAEQLYCKWEAWALANHKSTHLPAEQDLHALAAHIRSKSRSKPPVHRIPSPTSSRLLRPPAPTPTRID-IDDFFTYVDHPAQHPAQL---PERPLPKRTRMHPPSAPDAQRQQLSDPAPSNPNLMLDH-LPPLPGDHTPDSTYAQRHASGRVEAHFSNQHSTPHNPMARSDRGPLQIAPY-PRAKRTQFRYMNDTVAQRIAAVRHRLRTVGDRILQRVKQSRAHDMPPLSPSAFVEGSPTPVLLVGRIRTELDELDSKHGARINANSVLLESEDGHRIKLDLGRMLANKLPFFLAPGMIVLVEGVNTNGRLLHVHAIYDNAMPPAEQRH--QPKSESHQQPDAQHNMEPTPSAQHHSQPYARTIIAAGPFSCSTNLKYEPLTDLLHIVKREKPDMVILTGPFVEQSHPHISEKTPLSFEHLFVHRVFALLANTLSEMRQQHETTLPHFVIIPALEDVHHSFVCPQPPFHWPNDEPLDPNILLCPNPCVLKVSTSDARFSSFIGSSSLPTLLDISADSLCANKADRLGAIVSHMLRQKSFYPTFPPSSSVPLDTTFLERLDICDVDTGPTVDLIVVPSKLKAFAKSVDGGAIAVNPGMAATRHVETTRAAAIRLQLRTS 639          
BLAST of Gchil5908.t1 vs. uniprot
Match: R7Q9W4_CHOCR (DNA polymerase alpha subunit B n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q9W4_CHOCR)

HSP 1 Score: 405 bits (1042), Expect = 1.710e-132
Identity = 212/441 (48.07%), Postives = 292/441 (66.21%), Query Frame = 0
Query:  224 MHNPVLQRMNDVRSHTQTIVEQILSRLKLLR-DDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQT---SEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQV-EHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRRSIQANEDTIEVSVIRL 659
            M++ V  +++ VR+  + + ++IL+R++ LR +DE+P++S       SP  +L  GRIR ELEE D      IN  SV+LE E+G+ +KLNL R+   K P F+N GMVVVVEGVNTNG+   VHA+YDNAM     + Q+   +              +  QP+AN+I AAGPFT  +NL YEPL DLL +++R +P  V LTGPFV+ SH  +S  TP+ ++ +F +R++  L+  +A M        +FVL+P+L DVHHDFVCPQPAFR    Q  +  I L  NP V+E++++DG  V+ VG  +LP+LQDISAD +C NKPDR  +I SHM+RQ SFYP+FPPS +VPLD    D + I D +   TVD+++ PS+LKAFAKSVDGGA+AVNPGL  R S GG+YAE+ +PLH +   R + ANED ++ S+IRL
Sbjct:    1 MNDAVPAKIDAVRARVRHLGDRILARVRHLRNEDELPKISPESFFVRSPDVVLAVGRIRVELEETDGVGIGRINANSVVLESEEGNMVKLNLSRVHEKKQPMFLNSGMVVVVEGVNTNGRCIQVHAVYDNAMSLPPDARQKKDHRXXXXXXXXXXXXXXEQEQPFANIIFAAGPFTTSTNLNYEPLEDLLSVVERARPDAVFLTGPFVDASHADVSSATPVQFEHIFETRVLNRLRKAVAAMTDEGPRT-EFVLVPSLMDVHHDFVCPQPAFRLQAGQPSDARIRLVANPSVVELASRDGAAVATVGVANLPSLQDISADCICWNKPDRFAAIASHMVRQCSFYPTFPPSASVPLDCSLWDGMAIPDTERWPTVDVLVTPSRLKAFAKSVDGGAVAVNPGLLCRGSSGGSYAEMRIPLHEATSSRGLNANEDKLKASIIRL 440          
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A7R9J435_TIMCA (DNA polymerase alpha subunit B n=2 Tax=Timema TaxID=61471 RepID=A0A7R9J435_TIMCA)

HSP 1 Score: 177 bits (449), Expect = 5.990e-44
Identity = 136/472 (28.81%), Postives = 234/472 (49.58%), Query Frame = 0
Query:  176 QYANRTGSGRVEASL-DNSEATPHNPLSRDLLGPIHVQPFTPH-QPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEG----EDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQR--HVFQEKREVKMEEEDEVEQHSQPYA----NLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRN-KPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIAL 634
            +YA RT SG+   S  DNS    H     D    + +     H  P+TRYM     +++ +  +    IV+ I S L  ++   +     + R    P  +++ GR+  +        N  +N+ SV+LEG      G  + ++LH+L      + + PG V+  E +N  G+L     +Y +A   S +R  ++  +     +++     +HSQP      +++VAAGP+T+   L YEPL DLLQ ++ NKPHV+IL GPFV+ +H HI   +     E F  + I  +  T+  +        Q V++P+  D HH  + P PAF+    +   ++   P+PC++++          VG TS+  L +I  + +  + K DRLG + SH+L Q+ FYP +PP  ++ +D   L++        G T  ++I+PS L++F K ++G  + VNP   ++   GG++A + +
Sbjct:  194 KYAARTNSGKAMCSYGDNSTEWKH---LGDSYPSVELSSLVTHITPNTRYM----FEQLREKAAVLDDIVDWIGSYL--IKKHSLDGPFPLNRPHAEP--MVVVGRVCCD-------ANGHLNVNSVLLEGTRVMSGGMSVYMDLHQLPQ----YSLFPGQVIAAEVLNPTGRLLMAKQLYTDASLPSPERLPNISSQDAITMLKDSSSPSEHSQPGGRGPLHMLVAAGPYTQTDTLTYEPLEDLLQHVKTNKPHVLILIGPFVDSTHPHIVDGSFAETFESFFEKTIDGIMNTLKDVKC------QVVIVPSWRDAHHHMIYPTPAFQ--LTKHYPSVLCAPDPCMVDIQGL------IVGITSVDVLLNIGKEEISLSTKGDRLGRLASHVLAQQYFYPLYPPEESLNVDLELLEK----HTHLGVTPHVLILPSDLRSFIKDING-CVVVNPERLAKGVVGGSFARLVV 624          
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A1Z5KI39_FISSO (DNA polymerase alpha subunit B n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KI39_FISSO)

HSP 1 Score: 171 bits (434), Expect = 5.800e-42
Identity = 152/509 (29.86%), Postives = 234/509 (45.97%), Query Frame = 0
Query:  175 EQYANRTGSGRVEASLDNSE--ATPHNPLSRDLLGPIHVQPFTPHQPHT-RYMHNPVLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPAT--ILIAGRIRTELEEIDASCNAT----INLESVILEG---EDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHI-SPQTPM----------PYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFR----------WPFAQ-----------VE-------HNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKP--DRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYA 630
            ++Y  RTG+G++ ++    E     + PLSR     I    F+ +  HT R M     QR   +      + + ++ + +L + D++  L  +    G P    +   GRI          CNA     IN  S +LEG   E G  + L+     +    + + PG +V +EG+N  G+   V  + + A             R   + +     Q  QP   L+ AAGPFT   N  Y+PL DLL ++Q+ +P VVILTGPFV+  H  + S QT +          PY+  FV +I + L+     +     L+ QFVL+P+LED   ++V PQP F+           P A            VE         +H  PNPC L+++         +G TS   L  +SAD    N P   RL  I  H+L+QRS+YP FPP+  + +D  ++++  +         D++I+PSKL  F+++V    I VNPG  +R++ GGTYA
Sbjct:  135 DKYETRTGAGQIVSTFSAKEKRTATYVPLSRPKCA-IRKDSFSTNLSHTYRSMFTTTEQRATALNQQLLEMTKHLIDKYQLGQSDQVAPLEGV----GIPRADQVCNVGRI----------CNAAHAGKINATSCLLEGSRAEGGVRVSLDW----SGVSQYSVFPGQIVALEGMNPTGRKLQVQRLCEGAAAAPVTT------RRSALRQYHLQAQEGQPL-KLVTAAGPFTTSDNFHYQPLQDLLHVVQQEQPDVVILTGPFVDLDHPAVQSGQTILQDEEGNDVIVPYETFFVHKISLLLEEL---LTEHPMLMTQFVLVPSLEDATAEWVYPQPPFQDRVPGGLQPNIPGADGITIGTMGLDYVETATELPCQRVHCVPNPCTLQINEV------VIGITSTDVLFHMSADETNANLPPGSRLARISQHLLQQRSYYPLFPPAPGMNMDYQYMEQWSMPCQP-----DVLILPSKLACFSRTVMDTTIVVNPGRLTRDTVGGTYA 603          
BLAST of Gchil5908.t1 vs. uniprot
Match: UPI0009E1AEF1 (DNA polymerase alpha subunit B-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E1AEF1)

HSP 1 Score: 171 bits (432), Expect = 8.140e-42
Identity = 137/468 (29.27%), Postives = 229/468 (48.93%), Query Frame = 0
Query:  176 QYANRTGSGRVEASLDNSEATPHNPLSRDLLGPIHVQPFTPHQPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEGED----GHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESH-QHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEHN----IHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDI-SADSLCR-NKPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEI 632
            +Y++R  SG +  S + S + P + + + +        +   +      +  + Q+  D  +    +++ +  +L+     E    S++C    +   + + GRI  +        N  +N +SV+LEG      G  IKL+L  L      F + PG VV +EGVN+ G+   V     N + T  Q         V+   ED     S+P+  + VAAGPFT   +L YEPL+DL+Q +Q +KP+++IL GPFV+  H Q I+     P++++F  ++   ++AT       ++L    V +P+  DVHHDFV PQP F       E N    IH   +PC L V+         VG +S+  L  + S +++C     DR G ++ H+L Q S+YP  PP+  V +D    ++  ++  +     D++I+PS L+ FAK   G  + +NPG  ++   GGTYA++
Sbjct:  164 KYSSRNNSGEIVFSFNPSGSDPQHIIQQHIPATHLTVQYATQKDALLNSYKYMFQKQGDKATVLGELIDNMAEKLQASLGVE--EFSSLCIP--TQEEVFVIGRICCD-------SNGKLNSQSVVLEGSQELSSGQQIKLDLSEL----RQFALFPGQVVAIEGVNSTGQKLVV-----NKLCTGVQLPFHSPVENVEHGSEDIT---SEPFL-MSVAAGPFTTSDSLLYEPLADLMQKVQNDKPNLLILLGPFVDTKHDQIINGDLEEPFEDLFDRQVQQIVKAT-------EKLATTVVFVPSHRDVHHDFVYPQPPFSTKVNTAEFNAAERIHFVSDPCTLVVNNVS------VGLSSMDVLLHLASEETVCPPGSSDRFGRLLKHILHQHSYYPLHPPAEDVNIDYEQFEKYAMLPYNP----DILILPSDLRYFAKDTLG-CLCLNPGRLAKGHVGGTYAKV 589          
BLAST of Gchil5908.t1 vs. uniprot
Match: Q6DCZ1_XENLA (DNA polymerase alpha subunit B n=7 Tax=Xenopus TaxID=8353 RepID=Q6DCZ1_XENLA)

HSP 1 Score: 170 bits (431), Expect = 8.790e-42
Identity = 134/462 (29.00%), Postives = 215/462 (46.54%), Query Frame = 0
Query:  175 EQYANRTGSGRVEASLDNSEATPHNPLSRDLLGPIHVQPFTPHQPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRLK-LLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISP-QTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRW--PFAQVEHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNK--PDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYA 630
            ++Y +RT  G V  +    + T  N  S        V+ FT        M+  + Q++ D+R      +E++ + LK   + DE   +S            L A    T L +I    N  +N +SVILEG+  H   + +   ++    + + PG VV++EG N+ G+ F    +Y+       Q            +E +E      P   +I A GPFT    + Y+ L DL+ I+ R++P + IL GPF++  H+ I   Q  + +++VF   + + ++ T  +           V++P+L DVHHD V PQP F    P  + +  +H   +PC L V+         +G TS   L  + A+ +  +   PDR   I+ H+L QRS+YP +PP+  + +D   L     M V    T D+ IVPS+L+ F K V G  I +NPG  ++   GGTYA
Sbjct:  159 QKYGSRTNRGEVVTTYGELQGTTWNGGSGSNTN---VELFTSLDEPLTKMYKFMFQKLMDIREVVSIKIEELGASLKDHFQIDEFTSVS------------LPAQETVTVLGQIGCDSNGKLNSKSVILEGDREHSAGMQVPVDLSELKDYSLFPGQVVIMEGTNSTGRRFVPTKLYEGVPLPFHQ----------PSKEFEEC-----PQQMVITACGPFTTSDTITYDALKDLIDIVNRDRPDICILLGPFLDAKHEQIENLQLTVTFEDVFKRCLKMIIEGTRPSGC-------HLVIVPSLRDVHHDPVYPQPPFSCFEPAKEDKERVHFVADPCTLSVNGV------VIGMTSTDLLFHMGAEEISSSAGAPDRFSRILRHILTQRSYYPLYPPNEEINIDYEALYSYTPMPV----TPDVFIVPSELRYFIKDVTG-CICINPGRLTKGLVGGTYA 572          
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A7R9HXE8_9NEOP (DNA polymerase alpha subunit B n=5 Tax=Timema TaxID=61471 RepID=A0A7R9HXE8_9NEOP)

HSP 1 Score: 170 bits (430), Expect = 1.200e-41
Identity = 139/472 (29.45%), Postives = 229/472 (48.52%), Query Frame = 0
Query:  176 QYANRTGSGRVEASL-DNSEATPHNPLSR--DLLGPIHVQPFTPH-QPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRL--KLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESVILEG----EDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQR--HVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEHNIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRN-KPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIAL 634
            +YA RT SG+   S  DNS     N   R  D    + +     H  P+TRYM     +++ +  +    IV+ I S L  K   D+  P    + R    P  +L+ GR+  +        N  +N+ SV+LEG      G  + ++LH+L      + + PG V+  E +N  G+      +Y +    S +R  H+  +   +                +++VAAGP+T+   L YEPL DLLQ ++ NKPHV+IL GPFV+ +H HI   +     E F  +II  +  T+  +        Q V++P+  D HH  + P PAF+    +   N+   P+PCV+++          VG TS+  L +I  + +  + K DRLG + SH+L Q+ FYP +PP  ++ +D   L++        G T  ++I+PS L++F K ++G  + VNP  +++   GG++A + +
Sbjct:  167 KYAARTNSGKAMCSYGDNS-----NEWKRLGDSYPSVELSSLVTHITPNTRYM----FEQLREKAAILDDIVDWIGSHLIKKHSLDEPFP----LNRPHAEP--MLVVGRVCCD-------ANGHLNVNSVLLEGTRVMSGGMSVYMDLHQLPQ----YALFPGQVIAAEVLNPTGQRLMAKKLYTDVSLPSPERLPHISSQDGPL----------------HVLVAAGPYTQTDTLTYEPLEDLLQHVKVNKPHVLILIGPFVDSTHPHIVDGSFAETFESFFEKIIDGIMNTLKDVKC------QVVIVPSWRDAHHHMIYPTPAFQ--LTKHYPNVLCAPDPCVVDIQGL------IVGITSVDVLLNIGKEEISLSTKGDRLGRLASHVLAQQYFYPLYPPEESLNVDLELLEK----HTHLGVTPHVLILPSDLRSFIKDING-CVVVNPERSAKGVVGGSFARLVV 577          
BLAST of Gchil5908.t1 vs. uniprot
Match: A7S4W9_NEMVE (DNA polymerase alpha subunit B n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7S4W9_NEMVE)

HSP 1 Score: 170 bits (430), Expect = 1.350e-41
Identity = 132/433 (30.48%), Postives = 212/433 (48.96%), Query Frame = 0
Query:  228 VLQRMNDVRSHTQTIVEQILSRLKLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNAT--INLESVILEGED----GHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYAN------LIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEH-NIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDI-SADSLCR-NKPDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRRSI 645
            + Q+  D  +    +++++  +LK+    E    +T   QG     + + GRI          C+A   +N  SV+LEG      G  +KL+L ++      F + PG VV   G+N+ G    V+ +Y+                 VK+     ++++ +  +N      ++VAAGP+T   +L YEPL+DL++++Q+NKP ++IL GPFV+  H+ I     +  DE F S  +   Q  + T A ++      V  P+  DVHHDFV PQP FR     ++H NIH   +PC L V          +G TS   L ++ S ++ C     DRLG +V H+L Q SFYP  PP+  V +D   L     +        D++++PS L+ F K++ G ++ VNPG  ++   GGTYA I +   +S    S+
Sbjct:  211 MFQKQVDKENVLNEMIDEMAEKLKIQHGIEEYAHTTSPSQG----EVTVVGRI---------CCDAVGKLNASSVMLEGSQDQSQGRQVKLDLTKV----QQFALFPGQVVAARGINSTGSKLVVNQLYEG----------------VKLPFYASLDRNGENLSNSKDPFVVVVAAGPYTTSDSLMYEPLADLIRMVQKNKPDLLILLGPFVDSKHEKIE---NVDLDETFES--LFKRQVDLITQA-TERQGTTVVFAPSQRDVHHDFVFPQPPFRKDTHAMDHKNIHFVSDPCTLLVGNVT------IGLTSTDVLLNLGSEETACPPGSSDRLGRLVKHILHQHSFYPLNPPNEEVNVDYERLSHHGTLPCSP----DLLVLPSDLRYFTKNILG-SLCVNPGRLAKGQVGGTYARILIQPDSSHTDASV 593          
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A7L2Z5P1_JACJC (DNA polymerase alpha subunit B (Fragment) n=1 Tax=Jacana jacana TaxID=54508 RepID=A0A7L2Z5P1_JACJC)

HSP 1 Score: 164 bits (416), Expect = 1.840e-41
Identity = 117/377 (31.03%), Postives = 188/377 (49.87%), Query Frame = 0
Query:  272 ATILIAGRIRTELEEIDASCNATINLESVILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISP-QTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEHN--IHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNK--PDRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRR 643
            + +L A    T L +I    N  +N +SV+LEG+  H     +   ++    + + PG +V +EG N++G++  V  +Y+  +       V  E+R V                  +VA GP+T   ++ YEPLSDLL +I R++P V +L GPFV+  H+ +   Q    + EVF   +   ++ T    A S     Q VL+P+L DVHH+FV PQP F  P    +    +HL P PC L++   DG     +G TS   +  + ++ +  +    DR   I+ H+L QRS+YP +PPS  + +D   L     + V    T D+++ PS+L+ F K V G  + +NPG  ++   GGTY  + L   +++  R
Sbjct:   24 SVLLPAQEAVTVLGQIGCDSNGKLNPKSVVLEGDREHSSGGQIPLDLSELQEYSLFPGQIVALEGTNSSGRMMVVSKLYEVRVFPPPHLMVPAEQRMV------------------LVACGPYTTSDSVAYEPLSDLLGVIARDRPDVCVLFGPFVDAKHEQVENCQLLGAFTEVFKLCLKTIIEGT--RSAGS-----QLVLVPSLRDVHHEFVYPQPPFPCPDLPRDDRLRVHLVPEPCTLDI---DGV---ILGLTSTDLIFHMGSEEISSSSGVSDRFTRILRHILTQRSYYPLYPPSEELNVDYEHLYSHASLPV----TPDVLVTPSELRYFLKDVLG-CVCINPGRLTKGQVGGTYGRLYLQREDTQGER 364          
BLAST of Gchil5908.t1 vs. uniprot
Match: A0A8B8DY70_CRAVI (DNA polymerase alpha subunit B n=1 Tax=Crassostrea virginica TaxID=6565 RepID=A0A8B8DY70_CRAVI)

HSP 1 Score: 169 bits (429), Expect = 2.110e-41
Identity = 120/369 (32.52%), Postives = 195/369 (52.85%), Query Frame = 0
Query:  295 INLESVILEGED----GHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIYDNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNLKYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHI-SPQTPMPYDEVFVSRIIVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEH----------NIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKP---DRLGSIVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSKLKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRRSI 645
            +N +SVILEG      G FI L+L  L      + + PG +V +EG+NT+G+ F V  +Y+  +Q+             K E+ D       P  ++++AAGPF+   NL +EPLSDL++ I+++KP VVIL GPFV+  +  I + +    +DE+F +++     + I+ +A+S     Q +++P+  DVHHD+V PQP F   F Q ++          N+H  P+PCV++++      V F G TS   +  + A+ +  N P   DR+  +  H+L Q++FYP +P    V +D    +    M      T  +++VPS LK F K + G    +NPG  +R   GGT++ + L     + R+SI
Sbjct:  279 MNAKSVILEGSRDTSAGRFIPLDLSDLKQ----YSLFPGQIVAMEGINTSGQKFVVKKLYEGVVQSLPSS---------KSEKADS------PDMSVLIAAGPFSTSDNLSFEPLSDLVKYIRKDKPDVVILMGPFVDMKNDLIENGKCTSSFDEIFKTKL-----SEISDVASSSG--SQVIVLPSYRDVHHDYVYPQPPF---FHQSQNSQSKAKSDYPNLHFMPDPCVVDINN-----VIF-GLTSSDVMFQLGAEEISYNPPGASDRMARLAEHLLTQQNFYPLYPSPEDVNIDYEEFELYARMPC----TPHVLVVPSDLKQFTKDIQG-CCCINPGRLARGQAGGTFSRLKLRAGVIQSRQSI 607          
The following BLAST results are available for this feature:
BLAST of Gchil5908.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IWW6_9FLOR8.020e-20452.02DNA polymerase alpha subunit B n=1 Tax=Gracilariop... [more]
R7Q9W4_CHOCR1.710e-13248.07DNA polymerase alpha subunit B n=1 Tax=Chondrus cr... [more]
A0A7R9J435_TIMCA5.990e-4428.81DNA polymerase alpha subunit B n=2 Tax=Timema TaxI... [more]
A0A1Z5KI39_FISSO5.800e-4229.86DNA polymerase alpha subunit B n=1 Tax=Fistulifera... [more]
UPI0009E1AEF18.140e-4229.27DNA polymerase alpha subunit B-like isoform X1 n=2... [more]
Q6DCZ1_XENLA8.790e-4229.00DNA polymerase alpha subunit B n=7 Tax=Xenopus Tax... [more]
A0A7R9HXE8_9NEOP1.200e-4129.45DNA polymerase alpha subunit B n=5 Tax=Timema TaxI... [more]
A7S4W9_NEMVE1.350e-4130.48DNA polymerase alpha subunit B n=1 Tax=Nematostell... [more]
A0A7L2Z5P1_JACJC1.840e-4131.03DNA polymerase alpha subunit B (Fragment) n=1 Tax=... [more]
A0A8B8DY70_CRAVI2.110e-4132.52DNA polymerase alpha subunit B n=1 Tax=Crassostrea... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007185DNA polymerase alpha/delta/epsilon, subunit BPFAMPF04042DNA_pol_E_Bcoord: 388..592
e-value: 1.9E-22
score: 79.7
NoneNo IPR availableGENE3D3.60.21.60coord: 366..658
e-value: 4.2E-41
score: 142.4
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 142..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 179..197
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 164..178
IPR016722DNA polymerase alpha, subunit BPANTHERPTHR23061DNA POLYMERASE 2 ALPHA 70 KDA SUBUNITcoord: 21..658

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025225_piloncontigtig00025225_pilon:130355..132334 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5908.t1Gchil5908.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025225_pilon 130355..132334 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5908.t1 ID=Gchil5908.t1|Name=Gchil5908.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=660bp
METQPQPKSFKLGGAALPRSLSAIAHSICEQNAITADQLDCKWEAWALAN
SHSTGLPSEEEFRAFAAHLRQKALKASVFKSTPPPRKSSLLHSPGPTPTR
VNNIDEFFNYLSDEAKKEVRVKAEPEPLIVRNLNQTLDDDATNAKRSRLF
KAEPIPAQVKPHDVNHLPGDDKQDEQYANRTGSGRVEASLDNSEATPHNP
LSRDLLGPIHVQPFTPHQPHTRYMHNPVLQRMNDVRSHTQTIVEQILSRL
KLLRDDEMPRLSTICRQGGSPATILIAGRIRTELEEIDASCNATINLESV
ILEGEDGHFIKLNLHRLVNNKHPFFINPGMVVVVEGVNTNGKLFDVHAIY
DNAMQTSEQRHVFQEKREVKMEEEDEVEQHSQPYANLIVAAGPFTRQSNL
KYEPLSDLLQIIQRNKPHVVILTGPFVEESHQHISPQTPMPYDEVFVSRI
IVPLQATIATMAASDELVPQFVLIPALEDVHHDFVCPQPAFRWPFAQVEH
NIHLCPNPCVLEVSAKDGQYVSFVGATSLPTLQDISADSLCRNKPDRLGS
IVSHMLRQRSFYPSFPPSNAVPLDTGFLDRLEIMDVDTGDTVDMIIVPSK
LKAFAKSVDGGAIAVNPGLASRESDGGTYAEIALPLHNSRQRRSIQANED
TIEVSVIRL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007185DNA_pol_a/d/e_bsu
IPR016722DNA_pol_alpha_bsu