Gchil839.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil839.t1
Unique NameGchil839.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length517
Homology
BLAST of Gchil839.t1 vs. uniprot
Match: A0A2V3ITA9_9FLOR (Protein sel-1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3ITA9_9FLOR)

HSP 1 Score: 436 bits (1121), Expect = 1.950e-145
Identity = 235/453 (51.88%), Postives = 295/453 (65.12%), Query Frame = 0
Query:   60 AKLLRTLPIRFTLNFVCDYPALGLDSILRMNLSEPMMIKFARQLEYGPVGRRGFRIASRYVALGILHHVILRSPDNIEAQCLKGELLLSFLHYGRNGLFIPRTGLEEALNCFETASDEPLGLFLKGRLMLTMEAIHKDTSKAALGKQLVLKAADDGCARALVFLAHRYEYPQLDRAVSFSSDVPKDRDSRERFIVGLYEKAAAADDPDALNDLGTSYAQEYGGLDADFDSVVKYYLRAIMAGSLHAFDNLGTHYETGMGMRFPDKVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLPRDIGRAEKYYSTALKLSSDCGDLQTMARTVRDLCALYATKIKLGNPNDEETLRCDKKLRNIIPSDAGADELMNKVNRGMSQIIRKRSTSVLTKLVGEENARLLAKRVRSVWKNNDNMPEEERDAIIQHLTGGEPVDQRTPPRKKRATGKR 512
            +KL+   P++ TL   CD P   L SILRMNL  P++I+FARQLE+GP GR G R A RY+AL IL HV+   P NI A CLKGELLL  +HYGRN    P + LEEAL+CFE AS +P GLFLKGRL+LTMEAIHKD  K+ +GK  VLKAA  GC RA VFLAHRYEYPQLD++VSF+SDVP+DRD RERFIV LY++AA A+DPD LNDLGTSYA+ YGGL  DFD V                            MRFPD++D                     XXXXXXXXXXXD LP+D+ RA+++Y   LKL +DC DLQT  R V DL +L  T IKL +P  ++  +C+K L  IIPS+   DE + +VN+ + Q +RKRS   L +++GEEN+RL  KR + VW NN+ +P+ +++A ++H+ G        PPRKKR T +R
Sbjct:   51 SKLINHFPLQLTLPIACDAPDFYLRSILRMNLPPPLLIEFARQLEFGPCGRVGERPAQRYLALCILSHVLQEHPKNIHALCLKGELLLPVVHYGRNYPTTPLSVLEEALSCFEAASHDPTGLFLKGRLLLTMEAIHKDVDKSKMGKACVLKAARCGCGRASVFLAHRYEYPQLDQSVSFASDVPRDRDERERFIVDLYKQAAEANDPDGLNDLGTSYAEGYGGLQPDFDVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXMRFPDRIDYVRALFYYKQGSQRGCPKCAYXXXXXXXXXXXDVLPKDLTRAKRFYMLCLKLCNDCNDLQTAGRAVSDLMSLLVTTIKLEDPGSQKARKCEKLLGTIIPSNESGDEYLERVNKALLQAVRKRSKRTLVRMLGEENSRLAFKRAKEVWNNNEGLPDADQEAALEHMFGNHAFQSPEPPRKKRNTSRR 503          
BLAST of Gchil839.t1 vs. uniprot
Match: R7Q7Q9_CHOCR (Sel1-repeat containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q7Q9_CHOCR)

HSP 1 Score: 281 bits (720), Expect = 5.880e-85
Identity = 158/420 (37.62%), Postives = 239/420 (56.90%), Query Frame = 0
Query:   79 PALGLDSILRMNLSEPM--MIKFARQLEYGPVGRRGFRIASRYVALGILHHVILRSPDNIEAQCLKGELLLSFLHYGRNGLFIPRTGLEEALNCFETASD--EPLGLFLKGRLMLTMEAIHKDTSKAALGKQLVLKAADDGCARALVFLAHRYEYPQLDRAVSFSSDVPKDRDSRERFIVGLYEKAAAADDPDALNDLGTSYAQEYGGLDADFDSVVKYYLRAIMAGSLHAFDNLGTHYETGMGMRFPDKVDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDTLPRDIGRAEKYYSTALKLSSDCGDLQTMARTVRDLCALYATKIKLGNPNDEETLRCDKKLRNIIPSDAGADELMNKVNRGMSQIIRKRSTSVLTKLVGEENARLLAKRVRSVWKNNDNMPEEERDA-IIQHLTG 493
            P      +LR+  + P   +I+  R     PVGR G R + R V + +   ++ R P+N+ A CLKGE L+S  HYG+N  + PR+ ++EA   F+TAS        FLKGR +LTME +H++  +A LG   V  AA + C RALVFLAHRYE PQLD + SF+SD+PK +  +ERFI+G Y+KAA   + DA+NDLGTSYA+ YG L+ DFD  V+ Y+  I AGSLHA+DN+GTHYETGM  RFP ++                                  T+  +  +AE YY  A++L+ D  D   +A+  +DL ALY T+IK+  P+  +     ++L +++  +    + + +VN+ ++  +R + T+ L+KLVG+ N + + K  ++V +        E +A ++ H+ G
Sbjct:   75 PNRAASMLLRLVSNAPTDSLIELIRVCFDAPVGRVGDRQSVRTVGVLLCDELLRRDPNNVHALCLKGEALVSCAHYGKNDPYAPRSVMQEAYELFDTASKLGSHTATFLKGRWLLTMEPLHRNAEQAHLGVTCVKAAARELCPRALVFLAHRYETPQLDSSFSFASDLPKGKAQKERFILGYYKKAAELGNADAINDLGTSYAEGYGNLECDFDKAVEQYILGIEAGSLHAYDNVGTHYETGMAGRFPGRIHLGKALYYYRLGAKQRCPKCTYNLAVAYDEGMSGTVSMNNKKAENYYIHAIRLAEDSNDAVVVAKAAKDLVALYITRIKVNRPDSIQVTSARRRLFSVVGDEDIIQQTLLQVNKSIATAMRGKITA-LSKLVGDMNCKTIVKHAKAVDQMVKRDKASETNAKLLFHILG 493          
The following BLAST results are available for this feature:
BLAST of Gchil839.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3ITA9_9FLOR1.950e-14551.88Protein sel-1-like n=1 Tax=Gracilariopsis chorda T... [more]
R7Q7Q9_CHOCR5.880e-8537.62Sel1-repeat containing protein n=1 Tax=Chondrus cr... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006597Sel1-like repeatSMARTSM00671sel1coord: 303..342
e-value: 71.0
score: 6.3
coord: 266..302
e-value: 12.0
score: 12.8
coord: 343..380
e-value: 9.3
score: 14.0
IPR006597Sel1-like repeatPFAMPF08238Sel1coord: 266..302
e-value: 0.22
score: 12.3
coord: 308..341
e-value: 0.083
score: 13.6
coord: 344..378
e-value: 0.0033
score: 18.1
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 161..421
e-value: 1.1E-28
score: 102.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 480..516
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 180..320
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 180..320
NoneNo IPR availablePANTHERPTHR43628:SF9SEL1-REPEAT-CONTAINING PROTEIN YBEQcoord: 253..401
NoneNo IPR availablePANTHERPTHR43628ACTIVATOR OF C KINASE PROTEIN 1-RELATEDcoord: 253..401
NoneNo IPR availableSUPERFAMILY81901HCP-likecoord: 256..381

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:357727..359277 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil839.t1Gchil839.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 357727..359277 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil839.t1 ID=Gchil839.t1|Name=Gchil839.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=517bp
MPSKRSYQPVRQSRPDRAKTKSETVLDQISPPKHGLPYATLPPRFSIPSP
SHPLFPTSFAKLLRTLPIRFTLNFVCDYPALGLDSILRMNLSEPMMIKFA
RQLEYGPVGRRGFRIASRYVALGILHHVILRSPDNIEAQCLKGELLLSFL
HYGRNGLFIPRTGLEEALNCFETASDEPLGLFLKGRLMLTMEAIHKDTSK
AALGKQLVLKAADDGCARALVFLAHRYEYPQLDRAVSFSSDVPKDRDSRE
RFIVGLYEKAAAADDPDALNDLGTSYAQEYGGLDADFDSVVKYYLRAIMA
GSLHAFDNLGTHYETGMGMRFPDKVDYDLALFYYRQGARKGCPKCAYNMG
AAYEEGMGDTLPRDIGRAEKYYSTALKLSSDCGDLQTMARTVRDLCALYA
TKIKLGNPNDEETLRCDKKLRNIIPSDAGADELMNKVNRGMSQIIRKRST
SVLTKLVGEENARLLAKRVRSVWKNNDNMPEEERDAIIQHLTGGEPVDQR
TPPRKKRATGKRKAKS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006597Sel1-like
IPR011990TPR-like_helical_dom_sf