Gchil3643.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil3643.t1
Unique NameGchil3643.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length80
Homology
BLAST of Gchil3643.t1 vs. uniprot
Match: A0A2V3IYU5_9FLOR (Complex III subunit 9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IYU5_9FLOR)

HSP 1 Score: 95.5 bits (236), Expect = 3.030e-24
Identity = 47/73 (64.38%), Postives = 56/73 (76.71%), Query Frame = 0
Query:    1 MAAREAATSGMAALRATVYNVLMRRNSVYVTALLAGGYVSTHLYFGATDSLWASLNRGKSWPEVCAALPPRAD 73
            MAAREAA SGMAA+RAT+YNVLMRRNSVYVT  +   Y  T++Y   TDSLW S+N+GKSW EV A LP + +
Sbjct:    1 MAAREAAMSGMAAVRATLYNVLMRRNSVYVTTCVVSSYALTNVYLKGTDSLWKSINKGKSWEEVQARLPEKEE 73          
BLAST of Gchil3643.t1 vs. uniprot
Match: S0F3V2_CHOCR (Complex III subunit 9 n=1 Tax=Chondrus crispus TaxID=2769 RepID=S0F3V2_CHOCR)

HSP 1 Score: 90.9 bits (224), Expect = 1.690e-22
Identity = 41/65 (63.08%), Postives = 51/65 (78.46%), Query Frame = 0
Query:    9 SGMAALRATVYNVLMRRNSVYVTALLAGGYVSTHLYFGATDSLWASLNRGKSWPEVCAALPPRAD 73
            +GM A RAT+YNVLM+RNSVYVTA + G YV+T+ Y   TDS+W S+N+GKSW EV A LPP+ D
Sbjct:    2 TGMPAFRATLYNVLMKRNSVYVTACVLGSYVATNAYLSGTDSIWKSINKGKSWEEVQATLPPKED 66          
BLAST of Gchil3643.t1 vs. uniprot
Match: A0A1X6NW64_PORUM (Complex III subunit 9 n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NW64_PORUM)

HSP 1 Score: 80.5 bits (197), Expect = 2.790e-18
Identity = 37/70 (52.86%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 MAAREAATSGMAALRATVYNVLMRRNSVYVTALLAGGYVSTHLYFGATDSLWASLNRGKSWPEVCAALPP 70
            MA+REAA  GMAA+R+ +Y+ +++RNS++   L+A G+  T+    ATDS+W S+N+GKSW EV AALPP
Sbjct:    1 MASREAAMGGMAAVRSALYSGIIKRNSIWTLTLVAAGFAGTNAMDSATDSVWGSVNKGKSWAEVQAALPP 70          
BLAST of Gchil3643.t1 vs. uniprot
Match: M2WRH0_GALSU (Complex III subunit 9 n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2WRH0_GALSU)

HSP 1 Score: 55.8 bits (133), Expect = 1.190e-8
Identity = 26/60 (43.33%), Postives = 40/60 (66.67%), Query Frame = 0
Query:   14 LRATVYNVLMRRNSVYVTALLAGGYVSTHLYFGATDSLWASLNRGKSWPEVCAALPPRAD 73
            LR T+YN+ MRRNSVYVT L+ GG+ +T     A+D +W + N+GK + ++  +L  R +
Sbjct:   11 LRETLYNLTMRRNSVYVTFLVIGGFAATKFMGAASDYVWETYNKGKLFKDLEKSLAAREE 70          
BLAST of Gchil3643.t1 vs. uniprot
Match: A0A0U5GVS0_ASPCI (Complex III subunit 9 n=1 Tax=Aspergillus calidoustus TaxID=454130 RepID=A0A0U5GVS0_ASPCI)

HSP 1 Score: 53.1 bits (126), Expect = 1.340e-7
Identity = 22/52 (42.31%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   13 ALRATVYNVLMRRNSVYVTALLAGGYVSTHLYFGATDSLWASLNRGKSWPEV 64
            AL A++Y  L+RRN+VY+TA+ AG +V    +  +T+ LW + NRG+ W ++
Sbjct:    4 ALAASIYQTLIRRNAVYLTAIFAGAFVFEVAFDTSTNKLWDTWNRGRQWKDI 55          
BLAST of Gchil3643.t1 vs. uniprot
Match: M1V6Q2_CYAM1 (Cytochrome c reductase subunit 9(X) n=2 Tax=cellular organisms TaxID=131567 RepID=M1V6Q2_CYAM1)

HSP 1 Score: 49.7 bits (117), Expect = 5.560e-6
Identity = 23/64 (35.94%), Postives = 37/64 (57.81%), Query Frame = 0
Query:    1 MAAREAATSGMAALRATVYNVLMRRNSVYVTALLAGGYVSTHLYFGATDSLWASLNRGKSWPEV 64
            M+A  A  +G AA+R +VYN+ MRR+SV+   ++A GY  +     + +  W   N+GK W  +
Sbjct:    1 MSASRAQYAGFAAVRNSVYNLFMRRSSVFAIVIVALGYAGSEAMNNSVERAWERYNKGKLWKHL 64          
The following BLAST results are available for this feature:
BLAST of Gchil3643.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
A0A2V3IYU5_9FLOR3.030e-2464.38Complex III subunit 9 n=1 Tax=Gracilariopsis chord... [more]
S0F3V2_CHOCR1.690e-2263.08Complex III subunit 9 n=1 Tax=Chondrus crispus Tax... [more]
A0A1X6NW64_PORUM2.790e-1852.86Complex III subunit 9 n=1 Tax=Porphyra umbilicalis... [more]
M2WRH0_GALSU1.190e-843.33Complex III subunit 9 n=1 Tax=Galdieria sulphurari... [more]
A0A0U5GVS0_ASPCI1.340e-742.31Complex III subunit 9 n=1 Tax=Aspergillus calidous... [more]
M1V6Q2_CYAM15.560e-635.94Cytochrome c reductase subunit 9(X) n=2 Tax=cellul... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036656Cytochrome b-c1 complex subunit 9 superfamilyGENE3D1.20.5.260coord: 16..79
e-value: 6.6E-18
score: 66.1
IPR036656Cytochrome b-c1 complex subunit 9 superfamilySUPERFAMILY81514Subunit X (non-heme 7 kDa protein) of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase)coord: 12..65
IPR008027Cytochrome b-c1 complex subunit 9PFAMPF05365UCR_UQCRX_QCR9coord: 17..64
e-value: 6.9E-15
score: 54.7
NoneNo IPR availableTMHMMTMhelixcoord: 26..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00025222_piloncontigtig00025222_pilon:386660..386899 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil3643.t1Gchil3643.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00025222_pilon 386660..386899 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil3643.t1 ID=Gchil3643.t1|Name=Gchil3643.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=80bp
MAAREAATSGMAALRATVYNVLMRRNSVYVTALLAGGYVSTHLYFGATDS
LWASLNRGKSWPEVCAALPPRADDDDDDD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036656QCR9_sf
IPR008027QCR9