Gchil7521.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7521.t1
Unique NameGchil7521.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length708
Homology
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BLAST of Gchil7521.t1 vs. uniprot
Match: A0A2V3J2B4_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J2B4_9FLOR)

HSP 1 Score: 609 bits (1570), Expect = 7.790e-207
Identity = 314/633 (49.61%), Postives = 424/633 (66.98%), Query Frame = 0 
Query:   34 KVHECRFLQLSLVGVTAVATSPSGRYIVLARSDCTVELKDREAMWSTTSAIPADYKERDTVYTSMAFSNCGSYVFAARAHGTIEVLKITEDGLVHHVSLTPGGGEITGVAVCRDMSNVGFKLALACADGRVRIMRPDPSFFSAEDGQELPTNTAFYETLSSEKTMAPVSCVAWYINPASEEETCIAAGDRHGGIRWINPSTGSCYGTAKIPSLDQVKVVMNTIQFSQDGKQVLCGDSRGLITIWSSASNTISDEFRIDGSHGEVLSSAVHLGTEFAPRNEMGKSEV-VFGTSSGEVAALRSIPGAELWSISRVRRIHTHKVCSIAVLPNGLFVSCSIDSFLAVFPSQALSGNGTFNWLWPHFRCVGQPDVQLLPDKGIALSKTSSVIEIWSFSRSTSVPVLSLRMNLERLSGLRSCSFDTQRGFMAVSTIDSFKIFRADGFKSNTVDFESVGGMEPFEISSEASSTLRGAIDMVYCGRNLVCLSKCRRRIFLFDGSRVHLLTLPPFDQKIGMFFCKLSGHSKKIMVSDSHGNVVVCTFDDSSEGMPSYR-CRILRCPLQSGQATHVSAISFSLSGTRAAVAYTDLSLCVLNLS--KKHDQAELFSDKEYFVIDSCFSSIANALSFARTEDSVL 662
            KVHECRF Q    GV++++ SPSGR+IV+AR+D ++ELKD  AMW+T S    +   +    T++ FS C SYVFA+RA+GTI++LK+T+DGLVH VSL+PGGG I  ++VCRD S  GF +A AC DGRVRI+RPDPSFF+ +D ++LPTN AFY+TL+SEK MAPV+C++W    AS  + CI AGD  GG+RW+NP+ GSCYG  KIPSL   KVVM TIQF++ G+QV CGDSRG +TIWSS +NTISDE  +DG +G VLSS +      A   ++  SEV VFG+  GE+A LRS+P +E WS SRV R+H+ KV SI+ L  G  VS S+DSFLA F  +AL      +W+WPH  CVGQP VQLL   G+ L K    IE WSFSR++  PVL+LRMNL +LS +R+CS+ T+    AV+T++SF +F+     S+    +S   +   ++ +  S  L+G IDM++CG  LVC+ +CR++IFL+    V  ++    +   G +FCKL+G  + +MVSDS GNV+VC+  D +    S     +     + GQ T VSA+SFS SG++ AVAYTDL L V + S  K  +Q    S      I+S  +S+ N++SF+RTE SVL
Sbjct:   43 KVHECRFFQSGSRGVSSMSVSPSGRFIVIARTDQSIELKDSRAMWTTISIFFPEPTLKQAPITTVEFSTCNSYVFASRANGTIQILKVTDDGLVHQVSLSPGGGRIHDLSVCRDPSIEGFCIAAACQDGRVRIIRPDPSFFALKDDRDLPTNPAFYDTLASEKAMAPVTCLSWAPYSASGTDDCIVAGDADGGVRWMNPTNGSCYGAGKIPSLRGKKVVMKTIQFARGGRQVFCGDSRGFVTIWSSRTNTISDEIHVDGLNGSVLSSTISKLPNTAEGEKLAGSEVIVFGSEGGEIATLRSVPDSEFWSASRVVRVHSDKVQSISSLGKGSIVSSSMDSFLATFNCKALFEQDRIDWMWPHVGCVGQPSVQLLQSSGMVLLKRHHSIEAWSFSRASPSPVLALRMNLHKLSDVRACSYSTKTETFAVATVNSFHLFKVTTQNSDDTGPQSFRDLRELKVPAGVSMRLKGCIDMLFCGEALVCIGRCRKQIFLYHQDEVQDISPSIPEGTRGTYFCKLAGAERNLMVSDSRGNVLVCSVSDQNPRTFSLSDWNLFSSESRKGQRTLVSAMSFSPSGSKIAVAYTDLGLRVFDFSRLKSSEQKCDGSLNSCASINSSLASVTNSISFSRTERSVL 675
The following BLAST results are available for this feature:
BLAST of Gchil7521.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3J2B4_9FLOR7.790e-20749.61Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 339..377
e-value: 0.56
score: 18.6
coord: 245..278
e-value: 14.0
score: 9.8
coord: 26..73
e-value: 62.0
score: 5.7
coord: 578..622
e-value: 170.0
score: 3.0
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 2..175
e-value: 2.5E-12
score: 48.3
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 192..663
e-value: 2.6E-15
score: 58.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..28
NoneNo IPR availablePANTHERPTHR44163U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 4 HOMOLOGcoord: 31..663
NoneNo IPR availableSUPERFAMILY82171DPP6 N-terminal domain-likecoord: 200..660
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 47..376

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:1703006..1705486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7521.t1Gchil7521.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 1703006..1705486 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7521.t1 ID=Gchil7521.t1|Name=Gchil7521.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=708bp
MQRSHSEKQTGSKQKNGNKPKKSSDEENSLMTFKVHECRFLQLSLVGVTA
VATSPSGRYIVLARSDCTVELKDREAMWSTTSAIPADYKERDTVYTSMAF
SNCGSYVFAARAHGTIEVLKITEDGLVHHVSLTPGGGEITGVAVCRDMSN
VGFKLALACADGRVRIMRPDPSFFSAEDGQELPTNTAFYETLSSEKTMAP
VSCVAWYINPASEEETCIAAGDRHGGIRWINPSTGSCYGTAKIPSLDQVK
VVMNTIQFSQDGKQVLCGDSRGLITIWSSASNTISDEFRIDGSHGEVLSS
AVHLGTEFAPRNEMGKSEVVFGTSSGEVAALRSIPGAELWSISRVRRIHT
HKVCSIAVLPNGLFVSCSIDSFLAVFPSQALSGNGTFNWLWPHFRCVGQP
DVQLLPDKGIALSKTSSVIEIWSFSRSTSVPVLSLRMNLERLSGLRSCSF
DTQRGFMAVSTIDSFKIFRADGFKSNTVDFESVGGMEPFEISSEASSTLR
GAIDMVYCGRNLVCLSKCRRRIFLFDGSRVHLLTLPPFDQKIGMFFCKLS
GHSKKIMVSDSHGNVVVCTFDDSSEGMPSYRCRILRCPLQSGQATHVSAI
SFSLSGTRAAVAYTDLSLCVLNLSKKHDQAELFSDKEYFVIDSCFSSIAN
ALSFARTEDSVLADRSNNRQSQSKEIVGIKTYNSNEEKVRYLTRSTELRK
SATVSTQ*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR036322WD40_repeat_dom_sf