Gchil8476.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil8476.t1
Unique NameGchil8476.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length522
Homology
BLAST of Gchil8476.t1 vs. uniprot
Match: A0A2V3IS76_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IS76_9FLOR)

HSP 1 Score: 312 bits (800), Expect = 1.960e-97
Identity = 222/506 (43.87%), Postives = 280/506 (55.34%), Query Frame = 0
Query:   52 HHVDIPWRTPS-TPFRALASPFTANXXXXXXXXXXXXXXATPIPLRLFPTQTPLNSQPCNSIPSHSKSTNDIHGPNRVKALQKESQSTSHNLLTPKQVRELRRLCRKTANRAEFEDRLIQIRQVASIAAMASSSLHLFDPENPQSGHALRIWVETHRAGGADWRDERPLSDAAIGELRRWDRRLKAWARLRFETFNSCESVHFEQNTCVNSGATD---TILRPVRLQFEQISVGTSPITPVNRVKNKGVGELEGTKAEV-----NSVRRMVSPTTPDEGNGFFLRSP----HVDNTRSKLGINKVVGSLRGTYNPTEALCVSRREWSKISSPPLKDG----GEQRRPLDMVSIDKVGDLINVTVPTLNAEEHPSRNVRGVTKLSSHGATTPSSCC--EENVL------------CAKELKTWRSVVLDATQSSDRE---GDGRANAKW-LSTHNLCGN--SIRDHERSDLQSITPAGRTDLDWGRLRSGDNASISSLYSLSEGSPR 520
            H    P +TP+ TPF+ALASPFTA+               TP  LRL PT TP  S      P H  ++       +  ++   S     +LLTPKQVRELRRLCRKTANRA+FEDRLIQIRQVASIAAMASSSLHLFDP+NP SGHALR WV+++RA GADWRDERPLSD AI ELRRWDR LKAWAR+RF+T N  +S     ++ VN+  +D   T LRPVRLQFE++SVG SPITP  R K        G    +      S+  + SP TPDE +  F  SP    HV ++            L  TY  T+A  + R  WSK   PPL        E R+PL  VSI+KVGDLINVTVP   +  H S +V     + +    + + C   +ENV              +   K+WR+ +L ++ S+ +E   G  R NA    S  N+  N    RD        +T   RTDLDW RLR GD  + +S  +++  +P+
Sbjct:    5 HDPPTPAKTPNVTPFKALASPFTASAPFTAPTTPYSSAELTPHQLRLSPTLTPQTSH----APQHLLTSPVFTPVTKPLSVDPVSTPAQPHLLTPKQVRELRRLCRKTANRAQFEDRLIQIRQVASIAAMASSSLHLFDPDNPHSGHALRAWVDSNRADGADWRDERPLSDHAIEELRRWDRLLKAWARVRFDTHNLTDSATPHPSSTVNARHSDEHETPLRPVRLQFERLSVGASPITPHYRTKLVASANAVGASPAICQPAEYSIMPLTSPLTPDERSAPFFHSPRPVAHVSHS-----------PLPATYG-TDANAM-RSVWSK---PPLATTLSRRAELRKPLCEVSINKVGDLINVTVPP--STPHASSSVYARDGVGNVAVRSNNGCMSEQENVFPGAAAKRASMSHASNTAKSWRNALLKSSGSAAQEDGVGAMRVNASVNASVKNVACNVSGARD------AVVTTPSRTDLDWRRLRGGDGGATTSSSAVTLTAPK 482          
The following BLAST results are available for this feature:
BLAST of Gchil8476.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IS76_9FLOR1.960e-9743.87Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 100..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004450_piloncontigtig00004450_pilon:218546..220111 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil8476.t1Gchil8476.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004450_pilon 218546..220111 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil8476.t1 ID=Gchil8476.t1|Name=Gchil8476.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=522bp
MDPTQNRSLQYPSSSGTPTLLCVGGMLRVADAPDLTIAGPPSPAPSSRLG
HHHVDIPWRTPSTPFRALASPFTANTPFTAPTTPYPYSTATPIPLRLFPT
QTPLNSQPCNSIPSHSKSTNDIHGPNRVKALQKESQSTSHNLLTPKQVRE
LRRLCRKTANRAEFEDRLIQIRQVASIAAMASSSLHLFDPENPQSGHALR
IWVETHRAGGADWRDERPLSDAAIGELRRWDRRLKAWARLRFETFNSCES
VHFEQNTCVNSGATDTILRPVRLQFEQISVGTSPITPVNRVKNKGVGELE
GTKAEVNSVRRMVSPTTPDEGNGFFLRSPHVDNTRSKLGINKVVGSLRGT
YNPTEALCVSRREWSKISSPPLKDGGEQRRPLDMVSIDKVGDLINVTVPT
LNAEEHPSRNVRGVTKLSSHGATTPSSCCEENVLCAKELKTWRSVVLDAT
QSSDREGDGRANAKWLSTHNLCGNSIRDHERSDLQSITPAGRTDLDWGRL
RSGDNASISSLYSLSEGSPRD*
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