Gchil883.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil883.t1
Unique NameGchil883.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length481
Homology
BLAST of Gchil883.t1 vs. uniprot
Match: R7QQR0_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QQR0_CHOCR)

HSP 1 Score: 494 bits (1271), Expect = 1.070e-168
Identity = 269/486 (55.35%), Postives = 335/486 (68.93%), Query Frame = 0
Query:    1 MAEGEFLGFGAFETTAFCTSILVACYSLISNPSGRQSAFDSAEYQIFAGWRLALLCIAAQLVLMATVLAQQLVRTTAERTEATAWLLLLMVAPWAPLAGSVRNTLTSGARVRRMMRRRLARNELAAVLRDRFKFGQRAIAVPSVIFHATGL-LPVFPNRALAQRPELAPHAAALRREAMMAAQLEEPNSLALGALWAMNQGLQPTSVSRFRLRAWKLISSVDPLARRWTVRTCVLNVDVMPDVPSIVERARYLDVIDLLQQGGTLSDELVHRGLGRFCHGCTLATRCAVEIFLESSQRSHTDLRAGEWLKNVGMDWAGSFERVIDVMWEACFMDSKALRVQGHHKD----ASPNYNDRSKVTTTKMLALLFIISRAVIGLTEDHPVFAAVCAVVADGSFALSWWTRYWERVGDKIRAKN--GGHI-----VVDSASRSVFKACLRELVDEDMFQIVHILLHTPVQDRMCSDSSCFLHSARLVSTAY 474
            M + EFLGFGAFETTAF T++LVA YSLISNP+GRQS+ +SAEYQ++AGWR AL+ +  QL LM  V+ QQ  +       A AWL+ LMVAPWAP+AG VR+T+TS  RVRR+M+ RL RNELAA++RDRFKFGQR IA+PS+IFHATG   P  P  AL      A H  ALR +A   AQ +EP SL LGALWAMNQ  QPTS+SR RL  W+ +S+ D LAR WT     L+ D MP + S +ERA YLDV DLLQQG T+SDEL+ RGL RFC  C L+ R AVE FLESS+R HTDLRAG+WLKN+GM+W G FERVIDVMWEA FMD+K  +++   KD     SP+Y+DR+KVTTTK  ALLF+I R+++    +H  +  V A+V DG F   WW RYW R+ + +RAK   GG       VV    R+ FKA LR+LVD+D+  IV   L     D +C D+ C+L+ A+++   Y
Sbjct:    1 MEDPEFLGFGAFETTAFLTAVLVASYSLISNPTGRQSSSESAEYQVYAGWRFALIVLFLQLSLMLFVIVQQSFKPEVP-ANAKAWLIALMVAPWAPVAGKVRDTVTSFYRVRRLMKSRLTRNELAAIIRDRFKFGQRGIALPSIIFHATGGDTPAHPIAALRANSYFAVHEDALREQAEATAQTDEPCSLDLGALWAMNQSRQPTSISRTRLFLWRGVSACDLLARAWTEPRFCLDADPMPGIKSDMERALYLDVADLLQQGNTVSDELMERGLRRFCERCRLSVRGAVEAFLESSERGHTDLRAGKWLKNIGMNWRGQFERVIDVMWEAAFMDAKGFKLEISQKDDVQDESPDYDDRAKVTTTKTFALLFLIIRSLLKANGEHGAYETVAAIVRDGPFTRVWWERYWARLEEIVRAKRVKGGPADLEKPVVCVQMRADFKAALRDLVDDDVKGIVEEFLQ-HADDSLCGDTECYLNPAKILVQEY 484          
BLAST of Gchil883.t1 vs. uniprot
Match: A0A1X6NYN9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYN9_PORUM)

HSP 1 Score: 346 bits (887), Expect = 1.330e-110
Identity = 216/497 (43.46%), Postives = 281/497 (56.54%), Query Frame = 0
Query:    5 EFLGFGAFETTAFCTSILVACYSLISNPSGRQSAFDSAEYQIFAGWRLALLCIAAQLVLMATVLAQQLVRTTAERTEATAWLLLLMVAPWAPLAGSVRNTLTSGARVRRMMRRRLARNELAAVLRDRFKFGQRAIAVPSVIFHATGLLPVFPNRALAQRPELAPHAAALRREAMMAA------------------QLEEPNSLALGALWAMNQGLQPTSVSRFRLRAWKLISSVDPLARRWTVRTCVLNVDVMPD------------VPSIVERARYLDVIDLLQQGGTLSDELVHRGL-GRFCHGCTLATRCAVEIFLESSQRSHTDLRAGEWLKNVGMDWAGSFERVIDVMWEACFMDSKALRV----QGHHKDASPNYNDRSKVTTTKMLALLFIISRAVIGLTEDHPVFAAVCAVVADGSFALSWWTRYWERVGDKIRAKNGGHIVVDSASRSVFKACLRELVDEDMFQIVHILLHTPVQDRMCSDSSCFLHS 466
            +F GFGAFETTAF T++LVA YSLI NP+GRQ   D +EY+++AGWRLA+L I AQL+LM  V    L R T+ +  A  W+LLLM   WAPLAG V++T++S  RVR MMR R+ RN+LAAV R+ F  GQR IAV  +++ A+G LPV P RAL    EL  H  A+RR A                        E    L +G LW+++QG QP SV    + A     + DPL   WT     L+V   PD            VP +  +ARYLD +D LQ GGTLSDEL  R L  RFC  C LA R AVE FLES+ R HTD+R+  W+ +V M WAG +E V+DV WEA FMD+ A R+    +G+H   S  Y D  KV T +M+ LLF++ RAV+G   + P  A +   V        +W  YWE   D +     G +       + FKA  R + D +M  +V +L  +PV   +C+D SC+LHS
Sbjct:    7 QFFGFGAFETTAFFTAVLVAAYSLIPNPTGRQGVSDRSEYRVYAGWRLAILVIGAQLILMVVVFGVLLRRGTSAK--AIVWVLLLMAGTWAPLAGLVKSTVSSWRRVRSMMRLRMTRNQLAAVAREYFLTGQRGIAVARIVYWASGELPVMPLRALGDVRELDAHRDAIRRAATPTVVAPPAAAVGWWHRSANKRAAEAGVLLDMGVLWSVHQGAQPGSVRGAVVAA--ATYAADPLVWAWTHEHVALSVTPFPDCRRAAATGGAPRVPPVRVQARYLDTVDELQTGGTLSDELDRRALRDRFCDRCALAIRGAVEAFLESNARGHTDMRSS-WVADVNMAWAGHYEAVVDVFWEAAFMDAAANRLTVSERGNH---SEGYGDYGKVVTLRMMTLLFLVLRAVMG---EAPPLAPLADRVDARLHTRGFWVEYWEAFRDAVSVN--GQVNASRIGTATFKAVTRTMQDREMGVLVDLLTTSPVTGSLCADPSCWLHS 490          
BLAST of Gchil883.t1 vs. uniprot
Match: A0A1X6P7I4_PORUM (Uncharacterized protein n=2 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6P7I4_PORUM)

HSP 1 Score: 195 bits (496), Expect = 1.150e-52
Identity = 156/499 (31.26%), Postives = 219/499 (43.89%), Query Frame = 0
Query:    5 EFLGFGAFETTAFCTSILVACYSLISNPSGRQSAFDSAEYQIFAGWRLALLCIAAQLVLMATVLAQQLVRTTAERTEATAWLLLLMVAPWAPLAGSVRNTLTSGARVRRMMRRRLARNELAAVLRDRFKFGQRAIAVPSVIFHATGLLPVFPNRALAQRPELAPHAAALRREAMMAAQLEEPNSL--------ALGALW-----AMNQGLQPTSVSRFRLRAWKLISSVDPLARRWTVRTCVLNVDVMP-----------------DVPSI------VERARYLDVIDLLQQGGTLSDELVHRGLGR-FCHGCTLATRCAVEIFLESSQRSHTDLRAGEWLKNVGMDWAGSFERVIDVMWEACFMDSKALRVQGHHKDASPNYNDRSKV-------------TTTKMLALLFIISRAVIGLTEDHPVFAAVCAVVADGSFALSWWTRYWERVGDKIRAKNGGHIVVDSASRSVFKACLRELVDEDMFQIVHILLHTPVQ 453
             FLGFGAFETTAFC ++LV  YS I  P+GRQ A D +E  I++ WR  ++ +   +VL A VL  Q+      RT    W L LMVAPWAP A  V   + +  +VRR+M  R+ARNE++ VLR+  + G +++   SV    TG+L    +R     P     A   R    M A  E    +          GA W     +M  G +P    R   R    +  +DP  R W+        D  P                 + P++      V RA  LD ID      TLSD      L    C  C LA R AVE F ESS R H ++ A +WL    +D+ G  E ++D MW ACF+D  AL+V    K      N+ SKV             TT K    LF+++R++ G+         V   V     +  WW  YW+ V +++      +   +     +    LR     +   I++IL+  PV+
Sbjct:    9 SFLGFGAFETTAFCVALLVGLYSFIKEPTGRQDARDVSEIHIYSMWRSGVVIVFLDMVLKAIVLTLQVKADKPART--VWWTLALMVAPWAPFADKVARGILAFGKVRRLMLARVARNEVSCVLREFLRMGHQSLDTASVAQKVTGVL----DREAFLMPTQTLEAVVARNGNRMTATEEYQKRVDEVMAAVRVGGAAWTVTRRSMRSGPKPDENIRHHRRM--RLRRMDPWTRMWSQCKIATVADPFPPSRLAREDDVANAHEDVNAPALGRAVRKVTRAYILDQIDECNGSQTLSDLRAEESLPEDLCDRCNLAVRAAVETFFESSLRGHMNVSANQWLYEADLDYHGRLEGIVDAMWSACFVDHFALQV-ADDKGYEEARNNASKVVDKPVLDSPPMAVTTRKFFVFLFLVARSLFGVCHSLE---EVGEYVKSRLHSRQWWDDYWQDVVEELGKARHSNDTYEDWIDGIKTDVLRNRTIAEAKAIINILVKHPVR 495          
BLAST of Gchil883.t1 vs. uniprot
Match: A0A1X6NST1_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NST1_PORUM)

HSP 1 Score: 159 bits (401), Expect = 1.600e-38
Identity = 151/499 (30.26%), Postives = 222/499 (44.49%), Query Frame = 0
Query:    7 LGFGAFETTAFCTSILVACYSLISNPSGRQSAFDSAEYQIFAGWRLALLCIAAQLVLMATVLAQQLVRTTAERTEATAWLLLLMVAPWAPLAGSVRNTLTSGARVRRMMRRRLARNELAAVLRDRFKFGQRAIAVPSVIFHATGLLPVFPNRALAQRPELAPHAAALRREAMMAAQLEEPNSLA-LGALWAMNQGLQPTSVSRFRLRAWKLISSVDPLARRWTVRTCVLNVDVMP---------------------DVPSIVE-RARY---------LDVIDLLQQGGTLSDELVHRGLGRFCHG----------CTLATRCAVEIFLESSQRSHTDLRAGEWLKNVGMDWAGSFE--RVIDVMWEACFMDSKALRVQGHHKDASPNYNDRSKVTTTKMLALLFIISRAVIGLTEDHPVFAAVCAVVADGSFAL--SWWTRYWERVGDKIRAKNGGHIVVDSASRSV--------FKACLRELVDEDMFQIVHILLHTP 451
            LG+G FETTA   +  VA YSL+ +P+G Q+  + +E  ++  WR A  C+   L +   V AQQLV     R     WLL LM+ PWAPLAGS R T+ S  RVRRM+R R ARN L AVLR+    G+  ++V +V    + +  ++   ++      + HA  L     +   +E   +L  LG                 R R  +++S  DPL R W+     L V   P                     + P++ + R R+         LDVIDLLQ GGT+++  V +   R   G          C LA R AVE FLESS R H   RA  W +++ M+ A  F    ++ V+ +A F+D     VQ          +DR+  T+ ++L L F ++R+ +G +       A  A + D  F    S  TR  E   + + A   G + +      V             R  VDED+ + +H+L   P
Sbjct:   71 LGYGPFETTAVMVAFPVAAYSLVRDPTGEQAGANVSELTVYRQWRTAAACLLFWLGVTIAVNAQQLV--AGWRGRDVLWLLALMLVPWAPLAGSARRTIASTLRVRRMVRDRGARNRLTAVLREFLHTGENNLSVTTVATALSEVPRLYHGVSMVMSFYESWHADGLASVGGLPVPVEHSTALVRLGEFCGR------------RARWLRIVSRFDPLLRMWSRPPVELEVSPFPRGDPADARGAPATAGGAARGEETPAVADLRPRFVPKANEPLVLDVIDLLQPGGTMAERRVRQLARRKTQGFFVDEPHCGLCVLAARAAVEAFLESSSRGHVGARADVWFRSIDMNDAVRFGSMNLLRVLRDAVFIDHDGRDVQ----------SDRA--TSIRVLWLFFCLARSALGASSR----LAPVATLLDDRFNSHPSLGTR--ELANEDLGALEPGKVYLHLGRPDVALFYHDSDLAEASRRKVDEDVRKALHLLSEKP 537          
The following BLAST results are available for this feature:
BLAST of Gchil883.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
R7QQR0_CHOCR1.070e-16855.35Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A1X6NYN9_PORUM1.330e-11043.46Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A1X6P7I4_PORUM1.150e-5231.26Uncharacterized protein n=2 Tax=Porphyra umbilical... [more]
A0A1X6NST1_PORUM1.600e-3830.26Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 381..399
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 50..72
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 357..375
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 376..380
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..29
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 106..356
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 400..480
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 30..49
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 84..105
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 73..83
NoneNo IPR availableTMHMMTMhelixcoord: 84..106
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 47..69
NoneNo IPR availableTMHMMTMhelixcoord: 138..155

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000017_piloncontigtig00000017_pilon:790262..791704 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil883.t1Gchil883.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000017_pilon 790262..791704 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil883.t1 ID=Gchil883.t1|Name=Gchil883.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=481bp
MAEGEFLGFGAFETTAFCTSILVACYSLISNPSGRQSAFDSAEYQIFAGW
RLALLCIAAQLVLMATVLAQQLVRTTAERTEATAWLLLLMVAPWAPLAGS
VRNTLTSGARVRRMMRRRLARNELAAVLRDRFKFGQRAIAVPSVIFHATG
LLPVFPNRALAQRPELAPHAAALRREAMMAAQLEEPNSLALGALWAMNQG
LQPTSVSRFRLRAWKLISSVDPLARRWTVRTCVLNVDVMPDVPSIVERAR
YLDVIDLLQQGGTLSDELVHRGLGRFCHGCTLATRCAVEIFLESSQRSHT
DLRAGEWLKNVGMDWAGSFERVIDVMWEACFMDSKALRVQGHHKDASPNY
NDRSKVTTTKMLALLFIISRAVIGLTEDHPVFAAVCAVVADGSFALSWWT
RYWERVGDKIRAKNGGHIVVDSASRSVFKACLRELVDEDMFQIVHILLHT
PVQDRMCSDSSCFLHSARLVSTAYSPKSIA*
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