Gchil5809.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5809.t1
Unique NameGchil5809.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length862
Homology
BLAST of Gchil5809.t1 vs. uniprot
Match: A0A2V3IRP7_9FLOR (TOG domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRP7_9FLOR)

HSP 1 Score: 431 bits (1108), Expect = 9.850e-131
Identity = 291/606 (48.02%), Postives = 366/606 (60.40%), Query Frame = 0
Query:    1 MLRSGMMSSSGCNSSDPLPPALLKKLEQLNPWHEQVEALQQLADLTIPLSKTADADAIMRQLRPSSHDLAEVINNPRSTLVKEACLCIETMAETFGPKFVAAVGIDVVPALLKRCAITKAVIRDSAREAAKAMFEHGVEGVHIGTARFISQAVLDKHAPVLTRAAAAEFIGMILVDRCRGSLSEIHQLISGAIIGGCCDSDETVRAISRDNCCRLFELEPALGAEVFAQLPGSAQQYIARTRSIPKAMDEEPVRLRRASMMPQRAPRPRLESFAANVPLNLKARYAPSRVHRASINPVELGSHMVVKDATAPRAAMFPRPGRVEFECRPNLARKQSRPNLRPPRRSMVPRLAAMDVYSNAIKGEDVSKSLPSTSVIAPSDRVMKTSMSAEMTSLVETKAAAKY---------------SKNKQDEGVGKGVSKS---PLSTSAPRDAHEEKATSPSA-------VTDSTEGCECESEQKTVSGADSETKVSGSSNESTPEARGSRRHSRGDDTRVDC------EATPDTRRSSSGYCDDAAAVEGGE-KSGDDDAWADEAQEEGEKR-VNKCRLSFILGVNETPRVMRTRRALRPDMSAMALMASP 573
            M R G +  S  N+S PLPP+LL KLE    W +QVEALQQLADLTIPLSK A+ DAIMRQLRP   +LAE I +PRSTLVKEAC+C+ET+AETFGP FVAAVGI+V+PALL RC+ITKA+IR+SAREAAKAMFEHGVEGVH+ TAR ISQ V+DK +P LTRAAAAE IG++LV+RCR  LS+IH L+  AI+ GC D D TVR ISRDNC RL  L+PAL   VF  LP  A+QYIA+ R     +DE  V  RRASM+PQRA RPR ES    + + L+ RYAP RV RAS+NPV+LGS  + KD   PR    PRP RV+ + RPNL RK  RP LRPPRRS+ P +   ++   A+K E  S S P  S  +          S     +VE K + K                SK  ++  VG+G  +S    L  ++P ++  + A   S          DS+ G  C S + + S    ET  +G++ E+      S       +TR  C      +  P   + + G  +   + E    + GD +      +  G K+ VNK RLSFI+GVN+TPRV RT    RPDMS + L+ SP
Sbjct:    1 MPRMGPLPPSDPNASGPLPPSLLHKLEPSTLWDDQVEALQQLADLTIPLSKQANVDAIMRQLRPYGLNLAEAIQSPRSTLVKEACMCVETLAETFGPNFVAAVGIEVIPALLGRCSITKAIIRESAREAAKAMFEHGVEGVHLSTARLISQTVVDKQSPTLTRAAAAELIGLMLVERCRDGLSDIHDLVHNAIVEGCGDPDGTVREISRDNCSRLLRLDPALWERVFRDLPTHAKQYIAKPRDRVGGVDES-VLPRRASMVPQRA-RPRHESMHTGMSVGLRGRYAPVRVQRASVNPVDLGSQSLFKDTMPPRVPNLPRPSRVDLDFRPNLPRKPFRPVLRPPRRSIAPFIPQNNINVCAVKEEPASTSPPLQSNTSTRSVEQDHVPSHTRGLVVEEKVSPKERILPEDDNPDSFQLESKTTKESIVGEGTEESGKHSLYLASPANSETKNACGESEHEAQQGESEDSSMGI-CLSAKSSKSRC-IETDSTGTAEEAERAPIPSLIIRSPTETRSICGSPSPPQQPPAENKETKGNRNSICSPESTPFREGDGEPSNRLTESPGLKKYVNKGRLSFIMGVNQTPRVNRTASMGRPDMSIVKLIDSP 602          
BLAST of Gchil5809.t1 vs. uniprot
Match: R7QH66_CHOCR (CLASP_N domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QH66_CHOCR)

HSP 1 Score: 140 bits (354), Expect = 2.190e-30
Identity = 96/254 (37.80%), Postives = 134/254 (52.76%), Query Frame = 0
Query:    1 MLRSGMMSSSGCNSSDPLPPALLKKLEQLNP-WHEQVEALQQLADLTIPLSKTADADAI-----------MRQLRPSSHDLAEVINNPRSTLVKEACLCIETMAETFGPKFVAAVGIDVVPALLKRCAITKAVIRDSAREAAKAMFEHGVEGVHIGTARFISQAVLDKHAPVLTRAAAAEFIGMILVDRCRGSLSEIHQLISGAIIGGCCDSDETVRAISRDNCCRLFELEPALGAEVFAQLPGSAQQYIARTR 242
            M R G+   S  ++  PLPP +L  L      W +Q +AL+        L+  A +DA+           +RQLR     LA  I  PRSTLV+EA  CI    E FGP FV  VG  +   +L +  ++ AVIR+SA EA KA+FEHGV G        + + V +     L RAAAA+F+GM+LV+ C   L  I   I  AI+ GC DSDE VRA+SR+N  +L  L+ +   ++  ++P +    IAR +
Sbjct:    1 MPRGGVSPPS--SNESPLPPFVLATLRDPEAEWEDQRDALKA-------LTAAAKSDAVARPNSQARHEFLRQLRDVGQPLATCIAAPRSTLVREASQCIIQCVEVFGPLFVDTVGNTLARPILDKTGVSIAVIRESAFEAGKALFEHGVTGFSPDIVNMLCEYVQNSKLSSLKRAAAAQFLGMVLVEDCLAGLEPIMGSIQRAIVRGCQDSDERVRALSRENWRKLEILDRSSARQLLNEMPANTTALIAREK 245          
The following BLAST results are available for this feature:
BLAST of Gchil5809.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IRP7_9FLOR9.850e-13148.02TOG domain-containing protein n=1 Tax=Gracilariops... [more]
R7QH66_CHOCR2.190e-3037.80CLASP_N domain-containing protein n=1 Tax=Chondrus... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR034085TOG domainSMARTSM01349TOG_3coord: 7..236
e-value: 1.3E-5
score: 34.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 13..247
e-value: 1.5E-30
score: 108.6
IPR024395CLASP N-terminal domainPFAMPF12348CLASP_Ncoord: 32..236
e-value: 4.5E-14
score: 52.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 436..474
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 611..659
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 475..496
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 513..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 405..532
NoneNo IPR availablePANTHERPTHR21567CLASPcoord: 27..495
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 25..826

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004449_piloncontigtig00004449_pilon:401329..404658 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5809.t1Gchil5809.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004449_pilon 401329..404658 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5809.t1 ID=Gchil5809.t1|Name=Gchil5809.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=862bp
MLRSGMMSSSGCNSSDPLPPALLKKLEQLNPWHEQVEALQQLADLTIPLS
KTADADAIMRQLRPSSHDLAEVINNPRSTLVKEACLCIETMAETFGPKFV
AAVGIDVVPALLKRCAITKAVIRDSAREAAKAMFEHGVEGVHIGTARFIS
QAVLDKHAPVLTRAAAAEFIGMILVDRCRGSLSEIHQLISGAIIGGCCDS
DETVRAISRDNCCRLFELEPALGAEVFAQLPGSAQQYIARTRSIPKAMDE
EPVRLRRASMMPQRAPRPRLESFAANVPLNLKARYAPSRVHRASINPVEL
GSHMVVKDATAPRAAMFPRPGRVEFECRPNLARKQSRPNLRPPRRSMVPR
LAAMDVYSNAIKGEDVSKSLPSTSVIAPSDRVMKTSMSAEMTSLVETKAA
AKYSKNKQDEGVGKGVSKSPLSTSAPRDAHEEKATSPSAVTDSTEGCECE
SEQKTVSGADSETKVSGSSNESTPEARGSRRHSRGDDTRVDCEATPDTRR
SSSGYCDDAAAVEGGEKSGDDDAWADEAQEEGEKRVNKCRLSFILGVNET
PRVMRTRRALRPDMSAMALMASPGSVAGADCPEVEVGASRGGDARKDGGC
VEGTEATGAVVERVGAAAAEAEEQEAQTADGDEDGNKTQGGTEEEEEEDA
LPKTPQLCMPDVSDFAELMADIEKQARRSVAPTMAVGQEGGTGSSDKENA
LTKNWRDSKPTAALQRALGRRADALRRVLAASRDAREDRRLAGARVLDAF
GVQFGVETQVSLLVRALHFDGAHCSRIAVVVGGCSALTAALQRARDGGGG
VVWTPAALHALLRLLARLAADRRVQVRAAARLVARAARVCLPQGAFELAC
RQLRLRPALFL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR034085TOG
IPR011989ARM-like
IPR024395CLASP_N_dom
IPR016024ARM-type_fold