Gchil5802.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil5802.t1
Unique NameGchil5802.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length405
Homology
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BLAST of Gchil5802.t1 vs. uniprot
Match: A0A2V3IRL5_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IRL5_9FLOR)

HSP 1 Score: 522 bits (1345), Expect = 7.490e-183
Identity = 243/381 (63.78%), Postives = 316/381 (82.94%), Query Frame = 0 
Query:   16 LFQNASLPEKGHTQHLSSPNFEYVATLYPSYRSPRCVLFRCGPPGQAQTAITTSCDRLQATVIKTKTNLTARHCVSDFLLTQWDTLEGSYRHGVSYVANNVVLATDARELPHSLNSISLSLDEKRRLVSTQWFSFLPSNQTRDLLRAWLNNARNYPANDNIALTKIRGCAGRDISCHSRRAVIGAVCQQPLRCGNENTFVMGAARTFLMLAFLQVSISAAKRSTVPVEMIAMLLLGVSLLSMKWTSAACTIARSLFCRCKTSLVASAEVDGTLFYGDLRGWFEGRAYLLRDGVYEARITGEMQLFFPMLFGLYTFFKRVVGDWLLLSGAIVVLISAGVSRFLFFVSSLKTGGGDDKDEYVKSFDDIKALGLRKKGYGRRFL 396
            +F+NASLP+KGHTQH++SPNF+Y+AT++PSYR PRCVL RCGPP Q QT ITT+CD LQ +V + K N+TA HCVSDFLL+ WDT+E SY+HGVSYV+N V+L TDAR LP   NSIS+S+DEKRR +STQW SFLPSN TR LLRAWL+NA+N+PA++N+AL++IRGCAG+DISCHSR+ VIGA C++ LRCG +N+F++  ART ++LAFLQ        + +P E+IA+LLL VSL +MKWTSAACTIARS+ CRC++SL A++ +DGTL+ G+LRGW+EGRAYLLRDGV+E R+TG MQ FFP LF L+ FFKRV+GDW+L  G++VV++    +R +  V+S K GG ++KD+YV+S DDI+ALG++K+GYGRRFL
Sbjct:    1 MFENASLPQKGHTQHITSPNFDYIATVFPSYRVPRCVLVRCGPPNQPQTTITTTCDTLQVSVQRAKRNITAHHCVSDFLLSHWDTMESSYKHGVSYVSNKVILGTDARNLPFLKNSISVSMDEKRRTISTQWLSFLPSNATRALLRAWLDNAKNHPADENMALSRIRGCAGKDISCHSRQGVIGATCEKALRCGKQNSFLLVVARTIVLLAFLQACALVVSEAAIPAEVIAVLLLVVSLFAMKWTSAACTIARSVLCRCRSSLSAASHMDGTLYEGELRGWYEGRAYLLRDGVHEVRVTGGMQPFFPGLFSLFMFFKRVIGDWVLFCGSMVVILVGFSARLVRIVASWKKGGEEEKDDYVRSIDDIRALGVQKRGYGRRFL 381
The following BLAST results are available for this feature:
BLAST of Gchil5802.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IRL5_9FLOR7.490e-18363.78Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..23
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 313..331
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 332..337
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 214..235
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..23
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 236..246
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 338..360
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 24..213
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 247..271
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 272..312
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 361..404
NoneNo IPR availableTMHMMTMhelixcoord: 338..360
NoneNo IPR availableTMHMMTMhelixcoord: 314..331

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004449_piloncontigtig00004449_pilon:241019..242233 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil5802.t1Gchil5802.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004449_pilon 241019..242233 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil5802.t1 ID=Gchil5802.t1|Name=Gchil5802.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=405bp
MLRPLLFLVVFTVLMLFQNASLPEKGHTQHLSSPNFEYVATLYPSYRSPR
CVLFRCGPPGQAQTAITTSCDRLQATVIKTKTNLTARHCVSDFLLTQWDT
LEGSYRHGVSYVANNVVLATDARELPHSLNSISLSLDEKRRLVSTQWFSF
LPSNQTRDLLRAWLNNARNYPANDNIALTKIRGCAGRDISCHSRRAVIGA
VCQQPLRCGNENTFVMGAARTFLMLAFLQVSISAAKRSTVPVEMIAMLLL
GVSLLSMKWTSAACTIARSLFCRCKTSLVASAEVDGTLFYGDLRGWFEGR
AYLLRDGVYEARITGEMQLFFPMLFGLYTFFKRVVGDWLLLSGAIVVLIS
AGVSRFLFFVSSLKTGGGDDKDEYVKSFDDIKALGLRKKGYGRRFLAPKR
SALP*
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