Gchil7390.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7390.t1
Unique NameGchil7390.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length468
Homology
BLAST of Gchil7390.t1 vs. uniprot
Match: A0A2V3J764_9FLOR (Putative ATP-dependent RNA helicase DDX49 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J764_9FLOR)

HSP 1 Score: 581 bits (1497), Expect = 3.150e-204
Identity = 309/437 (70.71%), Postives = 354/437 (81.01%), Query Frame = 0
Query:    1 MPTFVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNHIALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLKDQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARRAPARKAAAKRRKRRSETQPALKKQR 437
            M  F ALG+KPWL  +C T+GI  PT VQ ACI PIL+GRNVI AA TGTGKTAAFVLPIL +LA DP   FA++LTPTRELAFQIAQQI A GARIAVKH VLVGG+H L Q AALA  PHI+VATPGR+A M+++ ++ L+K RFLVLDEADRLL PTY  DL L+LNACS+P RQTLMFSAT+TSSL+QLQ+VA  N   TFR+DAR NRFATVDAL Q Y+FLP +LKECHLV LLK+++P+SSVIIFVARC+TA LLL MLNLLGM KVAALHS M Q  RIESLQRFKG LVRAL+ATDVASRGLD+P CELV+NYDLP+ VATYVHRVGRTARAGRSGLALSFVAQ D+ +VKAIE +I++ L  H G  E+  M+NLA TLKARQMA LRL D+G+F+ +EARR     AAAKRRK+        KKQR
Sbjct:    1 MTNFRALGVKPWLIESCKTLGIKKPTPVQLACISPILQGRNVIGAAETGTGKTAAFVLPILQKLAEDPYGVFAVILTPTRELAFQIAQQINAFGARIAVKHHVLVGGIHELSQAAALAKKPHILVATPGRMALMVSKGYVKLDKTRFLVLDEADRLLDPTYLTDLMLILNACSSPKRQTLMFSATMTSSLEQLQQVA-MNDDQTFRFDARKNRFATVDALRQEYLFLPQNLKECHLVNLLKEEYPTSSVIIFVARCDTAELLLNMLNLLGMNKVAALHSDMKQVHRIESLQRFKGKLVRALIATDVASRGLDIPTCELVINYDLPAKVATYVHRVGRTARAGRSGLALSFVAQQDVEIVKAIEEKIEKALDKHEGNPERKAMENLALTLKARQMAKLRLQDSGYFDKSEARRKSTI-AAAKRRKQEQRNLDGRKKQR 435          
BLAST of Gchil7390.t1 vs. uniprot
Match: R7QTL2_CHOCR (DEAD (Asp-Glu-Ala-Asp) box polypeptide n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QTL2_CHOCR)

HSP 1 Score: 503 bits (1296), Expect = 2.570e-173
Identity = 264/429 (61.54%), Postives = 324/429 (75.52%), Query Frame = 0
Query:    1 MPTFVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNHIALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLKDQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARRAPARKAAAKRRKRRSET 429
            M  F ALG+  WLQRAC T+GI  PT VQ ACIP IL GR+V+ AA TGTGKTAAFVLPIL  +  DP    A++LTPTRELAFQIAQ ++ALGA I ++   LVGGVH L Q AAL   PH+VVATPGRLA M+ R  + L ++RFLVLDEADRLL P+Y  DL  V+  C +  RQTLMFSAT+T+SL++LQ VA     +  R+DAR NR+ATV+ L Q Y+F+P HLKEC+LV LLK++F   SVI+FV+RCETA L++ MLNLLGM KVAALHS M Q RRIE+LQ+FKG  VRALVATD+ASRGLD+PACE+VVNYD+P   ATYVHRVGRTARAG+ G+A+SFV QSD+ LV AIE R ++KL       E+LVM  L++TLKARQ+  + L ++GF E  +A+R  ARK A +R+K RS+T
Sbjct:   36 MAAFAALGISSWLQRACKTLGILTPTPVQRACIPAILSGRDVVGAAETGTGKTAAFVLPILDAVGRDPYGIAAIILTPTRELAFQIAQHVSALGAPIGIREYTLVGGVHELAQAAALEKRPHVVVATPGRLALMIRRGVVDLARVRFLVLDEADRLLDPSYVDDLKAVVGECDSEKRQTLMFSATMTASLRELQEVAM--GANAMRFDARENRYATVEGLMQTYLFVPQHLKECYLVYLLKERFEKESVIVFVSRCETAELIVAMLNLLGMKKVAALHSDMKQTRRIEALQKFKGQSVRALVATDLASRGLDIPACEVVVNYDVPRQAATYVHRVGRTARAGKEGIAVSFVTQSDVELVHAIEARTEKKLEKIEDVKEELVMKELSNTLKARQIVKMNLDESGFLEQGDAKREGARKRAKRRKKERSKT 462          
BLAST of Gchil7390.t1 vs. uniprot
Match: A0A7S1TGZ7_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TGZ7_9RHOD)

HSP 1 Score: 357 bits (916), Expect = 1.220e-116
Identity = 192/402 (47.76%), Postives = 273/402 (67.91%), Query Frame = 0
Query:   15 RACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNH----IALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLKDQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARR 412
              CS++G+  PT VQ ACIPPILRG++ I +A TG+GKTAAFVLPILH L  DP A +AL+L P RELAFQIA+Q+ ALGA + V+ +V+VGG+  + Q  AL+  PH+++ATPGRL  +L        + L ++R +VLDEADRLL P +  +L L+  + ++  RQTL+FSATIT SL+++QR+   N    FR+ A      TV+ L Q Y+F+P  +K+C+L  LL+ ++   S I+FV RC+T  L+   L  LG+  VA LHS + Q  R+  L  F+ ++ R ++ATDVASRGLD+P   LV+NY++PS+  TYVHRVGRTARAGR G A++ + Q D+ LV+ IE +I RKL L +G  E+ V+ +++   KAR++A L + D+GF +  + RR
Sbjct:    1 EVCSSLGMKIPTPVQEACIPPILRGQDCIGSAETGSGKTAAFVLPILHALGRDPVASYALILEPARELAFQIAEQVRALGAPMGVREVVVVGGLDPVAQLTALSKKPHVIIATPGRLVEILQSTGSDRVLDLRRVRVVVLDEADRLLDPAFEEELDLLFASLNS-RRQTLLFSATITPSLEKIQRM---NLDRVFRFSATARSLETVENLQQTYLFIPDRVKDCYLSYLLRKKYSEISTIVFVGRCDTCELVARTLTSLGIQSVA-LHSQIKQDARLGILNSFRNSVNRVMIATDVASRGLDIPWVGLVINYNIPSAPDTYVHRVGRTARAGRCGRAINLITQYDVDLVRVIEDKIDRKLELESGIIEREVLQSISEVFKARRVARLEMVDSGFMDRVDKRR 397          
BLAST of Gchil7390.t1 vs. uniprot
Match: A7RZV2_NEMVE (RNA helicase n=1 Tax=Nematostella vectensis TaxID=45351 RepID=A7RZV2_NEMVE)

HSP 1 Score: 349 bits (896), Expect = 2.990e-113
Identity = 197/406 (48.52%), Postives = 272/406 (67.00%), Query Frame = 0
Query:    3 TFVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLA-FMLARNHIALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPD-RQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLKDQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFE 406
            +F  LGL  WL   C  +GI  PT +Q  C+PPIL+GR+ I  A TG+GKTAAF LPIL +L  DP   FA+VLTPTRELAFQIA Q   LG  I +K  V+VGG+  ++Q  +LA  PH+V+ATPGRLA  + + + + L K++FLVLDEADRLL P++  DL ++ +A   P+ RQTL+FSAT+T ++ +LQ+++       F Y+ + +  ATV  L QRY+  P H+++C+LV LL++   + SVI+F   C+   +L++M + LG+T V  LHS +SQ  R+ +L RFK   ++ LVATDVASRGLD+P  ELVVN ++P+    Y+HRVGRTARAGR G+A+S V Q D+  VK IE +I  KL  +T  SEK V+  L + L AR+ A LR+ D+   E
Sbjct:    8 SFAGLGLNKWLVSQCVAMGIKKPTEIQLNCVPPILQGRDCIGCAKTGSGKTAAFALPILQKLCDDPYGIFAVVLTPTRELAFQIADQFKVLGRPIGLKEAVIVGGLDMMKQALSLANKPHVVIATPGRLADHIKSTDTLNLKKIQFLVLDEADRLLDPSFGDDLKVIFDA--VPEKRQTLLFSATLTDTMGELQKMSGSQP---FSYEVQSD-IATVAELDQRYLLTPAHVRDCYLVHLLRENDDNQSVIVFTHTCKNCQVLVSMFHKLGLTCVG-LHSLLSQGERLAALARFKSGTIKILVATDVASRGLDIPQVELVVNSNIPADPKDYIHRVGRTARAGRGGMAISMVTQYDIDRVKKIEEKINTKLTEYTT-SEKEVLTLLKAVLVARREAELRVRDSDILE 405          
BLAST of Gchil7390.t1 vs. uniprot
Match: UPI000D624C69 (DEAD-box ATP-dependent RNA helicase 36 n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=UPI000D624C69)

HSP 1 Score: 351 bits (901), Expect = 3.220e-113
Identity = 196/425 (46.12%), Postives = 277/425 (65.18%), Query Frame = 0
Query:    3 TFVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNH---IALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLK--DQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARRAPARKAAAKR 422
            TF  LGL  W  + C  +G+  PT VQ  CIP IL G +V+  A TG+GKTAAF LPILHRLA DP   F LV+TPTRELA+Q+A+Q  ALG+ + ++  V+VGG+  + QT AL   PH+V+ATPGR+  ++ +N       +K +FLVLDEADR+L   +  +L +V   C   +RQTL+FSAT+TS+LQ L  V+A  A+    Y+     F TVD L Q+Y+F+P ++K+ +L+ +L   +     S IIFV+ C + HLL  ++  L   +VAALHS  SQ  R+ +L RFK   V  L+ATDVASRGLD+P  +LV+NYD+P     YVHRVGRTARAGR GLA+SF+ Q+D+ L+  IE  + +K+     C E  V++++    KA+++A +++ D GF E A+AR+A   K+ A++
Sbjct:   56 TFADLGLSDWALQTCKELGMKKPTPVQQHCIPRILSGEDVLGLAQTGSGKTAAFALPILHRLAEDPFGVFCLVVTPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDMISQTQALMQRPHVVIATPGRIKVLIDQNPDIPAVFSKTKFLVLDEADRVLDVGFEEELRVVFK-CLPDNRQTLLFSATMTSNLQSLLEVSANKAYFYEAYEG----FQTVDTLKQQYVFIPKNVKDVYLLHVLSRMEDMEIRSAIIFVSTCRSCHLLALLMEELDQ-EVAALHSFKSQSSRLSALHRFKSGKVPVLLATDVASRGLDIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLAISFITQNDVDLIHEIEADVGKKMEKFE-CKENEVLEDITKVYKAKRVATMKMMDDGFEEKAKARKAQKMKSLAEK 473          
BLAST of Gchil7390.t1 vs. uniprot
Match: A0A097PN48_9MAGN (RNA helicase 36 (Fragment) n=2 Tax=Chloranthaceae TaxID=16737 RepID=A0A097PN48_9MAGN)

HSP 1 Score: 345 bits (886), Expect = 4.170e-112
Identity = 198/415 (47.71%), Postives = 267/415 (64.34%), Query Frame = 0
Query:    4 FVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNH---IALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKEC---HLVTLLKDQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARR 412
            F  LGL  W    C  +G+  PT VQ  CIP IL G++V+  A TG+GKTAAF LPILHRL+ DP   FALV+TPTRELA+Q+A+Q  ALG+ + ++  V+VGG+  L Q  AL   PH+V+ATPGR+  +L  N       +K +FLVLDEADR+L   +  +L  V + C   DRQTL+FSAT+T  LQ L  ++   A+    Y+     F TV++L Q+Y+F+P ++K+    H+++ L+D+    S IIFV+ C + HLL  +L  L    V ALHSH SQ  R+ +L RFK   V  L+ATDVASRGLD+P  +LV+NYD+P     YVHRVGRTARAGR GLA+SFV Q+D+ LV  IE  I ++L     C E  V+DN+    KA+++A L++ D GF E A AR+
Sbjct:    1 FSDLGLSEWAINTCKELGMKKPTPVQHHCIPEILAGKDVLGLAQTGSGKTAAFALPILHRLSGDPYGVFALVMTPTRELAYQLAEQFRALGSSLHLRCAVVVGGMDMLNQAQALMQRPHVVIATPGRIKVLLTENPDVPAVFSKTKFLVLDEADRVLDSGFEEELRAVFH-CLPKDRQTLLFSATMTDDLQALLNLSGNKAYFYQAYEG----FRTVESLKQQYVFIPKNVKDVYLLHILSKLEDE-DIRSAIIFVSTCRSCHLLSLLLEQLDQA-VVALHSHKSQSLRLAALNRFKSGQVPILLATDVASRGLDIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLAVSFVTQNDVDLVHEIEAVIGKQLD-EFECKENEVLDNITEVYKAKRVAALKMMDDGFEEKANARK 407          
BLAST of Gchil7390.t1 vs. uniprot
Match: A0A7J7C209_TRIWF (DEAD-box ATP-dependent RNA helicase 36 n=1 Tax=Tripterygium wilfordii TaxID=458696 RepID=A0A7J7C209_TRIWF)

HSP 1 Score: 348 bits (892), Expect = 8.190e-112
Identity = 197/425 (46.35%), Postives = 278/425 (65.41%), Query Frame = 0
Query:    3 TFVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNHI---ALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLK--DQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARRAPARKAAAKR 422
            TF  LG+  W  + C  +G+  PT VQ  CIP IL GR+V+  A TG+GKTAAF LPILHRLA DP   FALV+TPTRELA+Q+A+Q  ALG+ + ++  V+VGG+  L QT +L + PH+V+ATPGRL  +LA N       ++ +FLVLDEADR+L   +  +L  V   C   +RQTL+FSAT+TS LQ L  ++A  A+    Y+     F TVD L Q+YIF+P ++K+ +LV +L   ++    S +IFV+ C + HLL  +L  L   +VAALHS  SQ  R+ +L RFK   V  L+ATDVASRGLD+P  +LV+NYD+P     Y+HRVGRTARAGR GLA+SF+ Q+D++L+  IE  + ++L  +  C+E  V+ ++    KA+++A +++ D GF E A+ R+    K  A++
Sbjct:   64 TFAELGIAEWAVQTCKELGMRKPTRVQTHCIPKILAGRDVLGIAQTGSGKTAAFALPILHRLAEDPYGVFALVVTPTRELAYQLAEQFKALGSCLHLRCSVVVGGMDVLTQTRSLMSRPHVVIATPGRLKVLLAENPDIPPVFSRTKFLVLDEADRVLDVGFEEELRAVFQ-CLPKNRQTLLFSATMTSDLQTLLELSANKAYFYEAYEG----FKTVDTLKQQYIFIPKNVKDVYLVHVLSKMEKMGIRSAMIFVSTCRSCHLLSLVLEELHQ-EVAALHSFKSQSLRLSALHRFKSGQVSILLATDVASRGLDIPTVDLVINYDIPRYPRDYIHRVGRTARAGRGGLAVSFITQNDINLIHEIEAVLGKELEKYE-CNENEVLSDITKVYKAKRVATMKMVDDGFEEKAKERKKQKLKTLAEK 481          
BLAST of Gchil7390.t1 vs. uniprot
Match: A0A103XZ51_CYNCS (DNA/RNA helicase, DEAD/DEAH box type, N-terminal n=1 Tax=Cynara cardunculus var. scolymus TaxID=59895 RepID=A0A103XZ51_CYNCS)

HSP 1 Score: 347 bits (891), Expect = 9.350e-112
Identity = 194/423 (45.86%), Postives = 276/423 (65.25%), Query Frame = 0
Query:    5 VALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNH---IALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLK--DQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARRAPARKAAAKR 422
            V+ GL  W  + C  +G+  PT VQ  CIP IL G +V+  A TG+GKTAAF LPILHRLA DP   F LV+TPTRELA+Q+A+Q  ALG+ + ++  V+VGG+  + QT AL   PH+V+ATPGR+  ++ +N       +K +FLVLDEADR+L   +  +L +V   C   +RQTL+FSAT+TS+LQ L  V+A  A+    Y+     F TVD L Q+Y+F+P ++K+ +L+ +L   +     S IIFV+ C + HLL  ++  L   +VAALHS  SQ  R+ +L RFK   V  L+ATDVASRGLD+P  +LV+NYD+P     YVHRVGRTARAGR GLA+SF+ Q+D+ L+  IE  + +K+     C E  V++++    KA+++A +++ D GF E A+AR+A   K+ A++
Sbjct:   55 VSSGLSDWALQTCKELGMKKPTPVQQHCIPRILSGEDVLGLAQTGSGKTAAFALPILHRLAEDPFGVFCLVVTPTRELAYQLAEQFRALGSCLNLRCAVVVGGMDMISQTQALMQRPHVVIATPGRIKVLIDQNPDIPAVFSKTKFLVLDEADRVLDVGFEEELRVVFK-CLPDNRQTLLFSATMTSNLQSLLEVSANKAYFYEAYEG----FQTVDTLKQQYVFIPKNVKDVYLLHVLSRMEDMEIRSAIIFVSTCRSCHLLALLMEELDQ-EVAALHSFKSQSSRLSALHRFKSGKVPVLLATDVASRGLDIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLAISFITQNDVDLIHEIEADVGKKMEKFE-CKENEVLEDITKVYKAKRVATMKMMDDGFEEKAKARKAQKMKSLAEK 470          
BLAST of Gchil7390.t1 vs. uniprot
Match: A0A2J6K5T1_LACSA (Uncharacterized protein n=3 Tax=Lactuca TaxID=4235 RepID=A0A2J6K5T1_LACSA)

HSP 1 Score: 345 bits (885), Expect = 7.910e-111
Identity = 200/436 (45.87%), Postives = 278/436 (63.76%), Query Frame = 0
Query:    3 TFVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNHI---ALNKLRFLVLDEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLK--DQFPSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARRAPARKAAA--------KRRKR 425
            TF  L L  W  + C  +G+  PT VQ  CIP IL G +V+  A TG+GKTAAF LPILHRLA DP   F LV+TPTRELA+Q+A+Q  ALG+ + ++  V+VGG+  + Q+  L   PH+V+ATPGR+  ++ +N       +  +FLVLDEADR+L   +  +L +V N C   +RQTL+FSAT+TS+LQ L  V+A  A+    Y+     F TVD L Q+YIF+P ++K+ +L+ +L   +     S IIFV+ C + HLL  ++  L   +VAALHS  SQ  R+ +L RFK   V  L+ATDVASRGLD+P  +LV+NYD+P     YVHRVGRTARAGR GLA+SF+ Q+D+ L+  IE  + +KL     C E  V++++    KA+++A +++ D GF E A+AR+A   K+ A        KRRKR
Sbjct:   57 TFSDLNLSDWALQTCKELGMKKPTPVQQHCIPRILSGEDVLGIAQTGSGKTAAFALPILHRLAEDPFGVFCLVVTPTRELAYQLAEQFRALGSCLNLRCAVIVGGMDMISQSQTLMQRPHVVIATPGRIKVLIEQNPDIPPVFSNTKFLVLDEADRVLDTGFEDELRVVFN-CLPKNRQTLLFSATMTSNLQSLLEVSANKAYFYEAYEG----FQTVDTLKQQYIFIPKNVKDVYLLHILSRMEDMGIRSAIIFVSTCRSCHLLGLLMEELDQ-EVAALHSFKSQSLRLSALHRFKSGKVPVLLATDVASRGLDIPTVDLVINYDIPRYPRDYVHRVGRTARAGRGGLAISFITQNDIDLIHEIEADLGKKLEKFE-CKENEVLEDITKVYKAKRVATMKMMDDGFEEKAKARKAQKMKSLADKGLLTKNKRRKR 485          
BLAST of Gchil7390.t1 vs. uniprot
Match: A0A0E9NG11_SAICN (Uncharacterized protein n=1 Tax=Saitoella complicata (strain BCRC 22490 / CBS 7301 / JCM 7358 / NBRC 10748 / NRRL Y-17804) TaxID=698492 RepID=A0A0E9NG11_SAICN)

HSP 1 Score: 343 bits (879), Expect = 1.190e-110
Identity = 202/433 (46.65%), Postives = 280/433 (64.67%), Query Frame = 0
Query:    3 TFVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGTGKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVKHLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNHI----ALNKLRFLVLDEADRLLHPTYHHDLALVLNAC-SAPDRQTLMFSATITSSLQQL-QRVAAQNAHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLKDQF-PSSSVIIFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRALVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSFVAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLHDTGFFENAEARRAPARKAAAKRRKRRSE 428
            TF +LGL  WL  A +++ I  PTA+QAACI PIL G + I  A TG+GKTAAF LPIL + + DP   +ALVLTPTRELA QIA+Q AALGA + +KH V+VGG+  +QQ  AL+  PH+V+ATPGRLA ++  N       L + +FLVLDEADRLL+P++  +L   ++      +RQTL+F+AT+T +++QL ++         F ++   +  A    L Q YI LP +++E +L TLL  +     S IIFV R  TA L+   L  LG+ +V ALHS M Q  R++SL RF+    R LVATDVASRGLD+P  E+VVNYDLP     YVHRVGRTARAGRSG +++FV++ D+ LV+AIE R+  K+  + G S+ +V+ NL +  +A++ A +++ D  F E  ++RR        K+ K+R E
Sbjct:    9 TFKSLGLDKWLVDALASMSIRKPTAIQAACIKPILEGNDCIGGARTGSGKTAAFALPILQKWSRDPWGVYALVLTPTRELALQIAEQFAALGAPVDLKHAVVVGGMDMMQQCLALSRRPHVVIATPGRLADIIRSNGDETIGGLKRCKFLVLDEADRLLNPSFADELEDCMSVLPDGSNRQTLLFTATMTDAIRQLTEQPPKPGRSKPFLHEVESS-LAVPSTLQQTYILLPSYVREAYLHTLLSLEVNEKKSAIIFVNRTRTAELIRRTLRALGI-RVTALHSDMPQRERVDSLGRFRAQAARVLVATDVASRGLDIPTVEMVVNYDLPRDPDDYVHRVGRTARAGRSGESVTFVSERDVLLVEAIEERVNAKMTKYDGVSDNMVVKNLTTVAEAKREAVVQMDDDKFGEQRDSRRRKREGGDRKQVKKRKE 439          
The following BLAST results are available for this feature:
BLAST of Gchil7390.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J764_9FLOR3.150e-20470.71Putative ATP-dependent RNA helicase DDX49 n=1 Tax=... [more]
R7QTL2_CHOCR2.570e-17361.54DEAD (Asp-Glu-Ala-Asp) box polypeptide n=1 Tax=Cho... [more]
A0A7S1TGZ7_9RHOD1.220e-11647.76Hypothetical protein n=1 Tax=Compsopogon caeruleus... [more]
A7RZV2_NEMVE2.990e-11348.52RNA helicase n=1 Tax=Nematostella vectensis TaxID=... [more]
UPI000D624C693.220e-11346.12DEAD-box ATP-dependent RNA helicase 36 n=1 Tax=Cyn... [more]
A0A097PN48_9MAGN4.170e-11247.71RNA helicase 36 (Fragment) n=2 Tax=Chloranthaceae ... [more]
A0A7J7C209_TRIWF8.190e-11246.35DEAD-box ATP-dependent RNA helicase 36 n=1 Tax=Tri... [more]
A0A103XZ51_CYNCS9.350e-11245.86DNA/RNA helicase, DEAD/DEAH box type, N-terminal n... [more]
A0A2J6K5T1_LACSA7.910e-11145.87Uncharacterized protein n=3 Tax=Lactuca TaxID=4235... [more]
A0A0E9NG11_SAICN1.190e-11046.65Uncharacterized protein n=1 Tax=Saitoella complica... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 21..223
e-value: 1.7E-45
score: 167.1
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 33..204
score: 28.428173
IPR001650Helicase, C-terminalSMARTSM00490helicmild6coord: 259..342
e-value: 4.4E-24
score: 96.0
IPR001650Helicase, C-terminalPFAMPF00271Helicase_Ccoord: 235..342
e-value: 1.0E-26
score: 93.4
IPR001650Helicase, C-terminalPROSITEPS51194HELICASE_CTERcoord: 232..386
score: 20.213779
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 26..192
e-value: 2.3E-43
score: 148.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 203..374
e-value: 5.5E-46
score: 158.0
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 1..202
e-value: 1.2E-65
score: 223.3
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 71..363
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 416..430
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 408..467
NoneNo IPR availablePANTHERPTHR24031RNA HELICASEcoord: 3..433
NoneNo IPR availablePANTHERPTHR24031:SF240ATP-DEPENDENT RNA HELICASE DDX49-RELATEDcoord: 3..433
NoneNo IPR availableCDDcd18787SF2_C_DEADcoord: 220..351
e-value: 2.42854E-49
score: 163.062
IPR000629ATP-dependent RNA helicase DEAD-box, conserved sitePROSITEPS00039DEAD_ATP_HELICASEcoord: 149..157
IPR014014RNA helicase, DEAD-box type, Q motifPROSITEPS51195Q_MOTIFcoord: 2..30
score: 9.289686

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:837395..838798 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7390.t1Gchil7390.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00000007_pilon 837395..838798 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7390.t1 ID=Gchil7390.t1|Name=Gchil7390.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=468bp
MPTFVALGLKPWLQRACSTVGIHAPTAVQAACIPPILRGRNVIAAAHTGT
GKTAAFVLPILHRLAHDPRAFFALVLTPTRELAFQIAQQIAALGARIAVK
HLVLVGGVHHLQQTAALAALPHIVVATPGRLAFMLARNHIALNKLRFLVL
DEADRLLHPTYHHDLALVLNACSAPDRQTLMFSATITSSLQQLQRVAAQN
AHHTFRYDARPNRFATVDALTQRYIFLPHHLKECHLVTLLKDQFPSSSVI
IFVARCETAHLLLTMLNLLGMTKVAALHSHMSQHRRIESLQRFKGNLVRA
LVATDVASRGLDVPACELVVNYDLPSSVATYVHRVGRTARAGRSGLALSF
VAQSDLHLVKAIEHRIQRKLHLHTGCSEKLVMDNLASTLKARQMANLRLH
DTGFFENAEARRAPARKAAAKRRKRRSETQPALKKQRVRQQQQQQPPDAP
AEPHPLQQPQPQQQQQQ*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR001650Helicase_C
IPR011545DEAD/DEAH_box_helicase_dom
IPR027417P-loop_NTPase
IPR000629RNA-helicase_DEAD-box_CS
IPR014014RNA_helicase_DEAD_Q_motif