Gchil10001.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil10001.t1
Unique NameGchil10001.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length297
Homology
BLAST of Gchil10001.t1 vs. uniprot
Match: A0A2V3IHV9_9FLOR (Exosome complex exonuclease RRP42 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IHV9_9FLOR)

HSP 1 Score: 474 bits (1221), Expect = 2.440e-167
Identity = 247/296 (83.45%), Postives = 266/296 (89.86%), Query Frame = 0
Query:    1 MQILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDDEIEVDEGEFSMPESAKDAPIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGLDILQATDKFLALDMGSRLSGESVQPIGFFS 296
            MQ LS+AE +YIR GAKDG+RSDGRAMLDIRPVTLET VLPTASGSARVRIGKVTDILVGIKPEV EPSQ  PDEGIISFTVECSSLASPDFVGRGGADLSAEL QLLTRLYTS  TRELR+SLSII+ KKCWILH+DALVLDSGGNLFGALSLAVRAALRVVILP+V VIPGEADDDDEIEVDE EF M E ++DAPIAVTLAS GDRG+YMADCTSEEE+C+ ASITMGVSPLGKS GAV  GTGGID+DTLSSMLKDA  LGL+IL ATD+FL  D+ +R+SG  + PIGFFS
Sbjct:    1 MQFLSDAECEYIRNGAKDGIRSDGRAMLDIRPVTLETTVLPTASGSARVRIGKVTDILVGIKPEVAEPSQDFPDEGIISFTVECSSLASPDFVGRGGADLSAELGQLLTRLYTSPVTRELRRSLSIIKGKKCWILHIDALVLDSGGNLFGALSLAVRAALRVVILPRVIVIPGEADDDDEIEVDEEEFKMLERSRDAPIAVTLASQGDRGIYMADCTSEEESCATASITMGVSPLGKSCGAVSAGTGGIDLDTLSSMLKDAAQLGLEILDATDRFLKTDIDNRMSGAPIVPIGFFS 296          
BLAST of Gchil10001.t1 vs. uniprot
Match: R7QD87_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QD87_CHOCR)

HSP 1 Score: 402 bits (1033), Expect = 9.350e-139
Identity = 205/294 (69.73%), Postives = 246/294 (83.67%), Query Frame = 0
Query:    3 ILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDDEIEVDEGEFSMPESAKDAPIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGLDILQATDKFLALDMGSRLSGESVQPIGFFS 296
            +LS AE  YI  GA  G+R+DGR +LD+RPVTLET++LPTASGSARVRIG VTDILVG+K EV EP   +PDEG++SF VECSSLASPDFVGRGGADL+AELSQLLTRLY SSATRELR+ L++I  +KCW+LHVDALVLDSGGNL+GALSLAVRAALRVV LP+V +IPGEADDDDEIEV+E  F     ++DAP+AVTL+++G RG+Y+AD TSEEEAC+KA+ITMGV+  G++ GAV  GTGG+D+DTL SMLKDA  +G DIL+ TD FL  D+    SGE V+P+GFFS
Sbjct:    1 MLSGAEKTYIEAGAAQGIRADGRGLLDLRPVTLETSLLPTASGSARVRIGGVTDILVGVKAEVVEPHVNAPDEGLMSFAVECSSLASPDFVGRGGADLNAELSQLLTRLYASSATRELRRGLALIPGRKCWVLHVDALVLDSGGNLYGALSLAVRAALRVVTLPRVVIIPGEADDDDEIEVNEEVFERLSRSEDAPVAVTLSAVGGRGIYIADSTSEEEACAKAAITMGVNLAGRACGAVSGGTGGVDMDTLKSMLKDAVRVGGDILKTTDSFLQDDIARMESGEEVEPVGFFS 294          
BLAST of Gchil10001.t1 vs. uniprot
Match: A0A4Y7NMQ1_9CRUS (EOG090X0CWA n=1 Tax=Scapholeberis mucronata TaxID=202097 RepID=A0A4Y7NMQ1_9CRUS)

HSP 1 Score: 198 bits (503), Expect = 1.400e-58
Identity = 117/293 (39.93%), Postives = 177/293 (60.41%), Query Frame = 0
Query:    3 ILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDDEIEVDEGEFSMPE-SAKDAPIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGLDILQATDKFLALDMGSRLSGESVQPIGF 294
            +LSEAE  +I    +D +R DGR+ LD RP+ LET ++  ASGSAR+R+   +DILVG+K E+T P+   P+EG I F V+CS+ A+P+F GRGG DL+ E+SQ L + Y   +T ++ + L ++   +CWIL+VD L+L+ GGNL+ A+SLAV++AL    +P V V   + D   E+E+ +  F   + + ++ P AVTL  +G+   Y+ D T EEE CS + I + +S   K +     G+G +  DTL SMLK  + +G     A +  L   +      E +Q +GF
Sbjct:    5 LLSEAEKAFIHHSVQDDLRCDGRSRLDYRPIVLETGLVSNASGSARLRLAN-SDILVGVKVELTSPAPDKPNEGRIEFFVDCSANATPEFEGRGGEDLANEISQFLHKAYLVGSTLDVAE-LCVLPGHQCWILYVDILILECGGNLYDAVSLAVKSALHSTQIPTVKVASMDGDQP-ELELSDDPFDTKKLNTRNLPCAVTLMKIGNH--YLVDPTPEEECCSASGIVVAISADKKVTAVKKIGSGSLHPDTLISMLKTGSEVG----SAVNTILTEKLLEEEKNEKLQKVGF 288          
BLAST of Gchil10001.t1 vs. uniprot
Match: A0A4Y7NLX5_9CRUS (EOG090X0CWA n=1 Tax=Moina brachiata TaxID=675436 RepID=A0A4Y7NLX5_9CRUS)

HSP 1 Score: 196 bits (498), Expect = 8.340e-58
Identity = 114/266 (42.86%), Postives = 168/266 (63.16%), Query Frame = 0
Query:    3 ILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILP--KVTVIPGEADDDDEIEVDEGEFSMPE-SAKDAPIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLG 265
            ++SEAE  +I  G +D +R DGR+ LD RP+ LET ++  ASGSAR+R+   +DILVGIK E+  PS   P EG I F V+CS+ A+P+F GRGG DL+ ++SQ L R Y S  T  L + L +I   +CWIL++D L+L+ GGNLF A+SLAV++AL    +P  KV  I G+     E+E+ +  +     + ++AP AVTL  +G+   ++ D T EEE+CS   I + +S  G  +    TG+G +  +TL++MLK +  +G
Sbjct:    5 LISEAEKAFIHHGVQDDLRCDGRSRLDYRPIYLETGIVSNASGSARLRLAN-SDILVGIKVELAAPSPDKPSEGRIEFFVDCSANATPEFEGRGGEDLANQISQFLQRAYASIDTLNLSE-LCVIPGLQCWILYIDILILECGGNLFDAVSLAVKSALYATQIPSVKVAAIDGDVP---ELELSDDPYDTKSLNVQNAPSAVTLMKIGNH--FIVDPTPEEESCSSCGIIVAISGNGSVTAVRKTGSGSLHTETLTAMLKTSKEIG 263          
BLAST of Gchil10001.t1 vs. uniprot
Match: A0A4Y7LPH5_9CRUS (EOG090X0CWA n=1 Tax=Eubosmina coregoni TaxID=186181 RepID=A0A4Y7LPH5_9CRUS)

HSP 1 Score: 195 bits (495), Expect = 2.350e-57
Identity = 118/293 (40.27%), Postives = 176/293 (60.07%), Query Frame = 0
Query:    3 ILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDDEIEVDEGEFSMPE-SAKDAPIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGLDILQATDKFLALDMGSRLSGESVQPIGF 294
            +LSEAE  +I  G +D  R DGR+ LD RP+ LET ++  ASGSAR+R+   +DILVGIK E+  P  + P EG + F V+CS+ A+P+F GRGG DL+ E+S+ L R Y+S  T +L + L ++E  +CW+L+VD L+L+ GGNLF A+SLAV++AL    +P V V   + ++  E+E+ +  F       ++AP  VTL  +G+   Y+ D T EEE CS + I + V+   K +     G+G +  ++LSSMLK     G +I    +K L   +      E  + +GF
Sbjct:    5 LLSEAEKAFIHHGVQDDFRCDGRSRLDYRPIVLETGLVSNASGSARLRLAN-SDILVGIKVELASPVPEKPKEGRLEFFVDCSANATPEFEGRGGEDLANEISRFLQRSYSSGETLKLTE-LCVLEGLQCWVLYVDILILECGGNLFDAVSLAVKSALHATEIPTVKVAAMDGNEP-ELELSDDPFDTKRLDTQNAPCVVTLMKIGNH--YLVDPTPEEETCSSSGIIVSVAGNRKITAVRKIGSGSLHHESLSSMLKT----GAEIGAVLNKILMKKLKDEEKLEKSKKVGF 288          
BLAST of Gchil10001.t1 vs. uniprot
Match: F6PLY6_CIOIN (Exosome complex component RRP42-like n=1 Tax=Ciona intestinalis TaxID=7719 RepID=F6PLY6_CIOIN)

HSP 1 Score: 195 bits (495), Expect = 2.350e-57
Identity = 113/302 (37.42%), Postives = 181/302 (59.93%), Query Frame = 0
Query:    3 ILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDDEIEVDEG--EFSMPESAKD--------APIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGLDILQATDKFLALDMGSRLSGESVQPIGF 294
            +L E+E  +I  G +D +R+DGR+  D R + +ET V+    GS+R+R+G  +++LVG+K E+  P  ++P+EG+I F V+CS  A P F GRGG DLSA +S +LTR+Y + ++ +L  +L II  K+CW++HVD L+L+ GGNL  A+S+AV+AAL    +P + V  G          DEG  E S+P+   D        AP+ VT++ +G R  ++ D +SEEE C  AS+ MGV+  G+++G    G G +D +++  M++    +G  +  + DK L  + G     E ++  G+
Sbjct:    5 MLGESEKWFIIHGIQDDMRNDGRSCEDYRHIEVETGVVSNTHGSSRLRLGS-SELLVGVKVELGSPDPKAPNEGLIHFHVDCSPNADPSFQGRGGEDLSANISCILTRIYCNKSSIDLN-TLGIIPHKQCWVVHVDVLILECGGNLLDAVSIAVKAALHNTGVPNIQVTDG----------DEGTQEISLPDDPNDVKFINTVNAPVLVTISKVGSR--HVVDASSEEELCCNASLVMGVTKRGRTTGMRKMGGGSLDPESIPEMIETGKNIGRQLHISLDKLLKTEQGMA---EDIEKAGY 289          
BLAST of Gchil10001.t1 vs. uniprot
Match: A0A2V0PN95_9CHLO (Exosome complex component n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PN95_9CHLO)

HSP 1 Score: 191 bits (486), Expect = 4.420e-56
Identity = 117/275 (42.55%), Postives = 157/275 (57.09%), Query Frame = 0
Query:    4 LSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDD-EIEVDEGEFSMPESAKDAPIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGLDILQATDKFLA 277
            +S+AE  YI  G   GVR+DGR   D RP+ LE  V+  A+GSAR+ +G  TD++VG+K  +  P    P +G +  TVECSS ASP+F GRGG D   +++  L     SS       SL ++  K  W +H+D LVL+ GG + GALS+A RAAL V  LPKV V  GE DDD+ EIE+ +     P      P+ V++A +G R V   D ++EEE C+ A +   V P G+   A  TG GGI    L  ML+ A  LG  +L+  D FLA
Sbjct:    5 ISDAEKLYIAQGVAQGVRNDGRGCHDARPLELELGVVAQANGSARLHVG-ATDVMVGVKVSLVSPDAAEPAKGQVFATVECSSCASPEFKGRGGEDWGIDMAAALQSALQSSLDLG---SLVVLAGKTVWAVHLDCLVLNDGGGVLGALSVAARAALAVTRLPKVEVTMGEGDDDEPEIELGDDSEGTPMGVTRVPVIVSVAQIGSRCVV--DPSAEEEPCASAVLHFAVGPGGRLGAATKTGAGGIPQPALLEMLEAAQQLGPKVLRELDGFLA 273          
BLAST of Gchil10001.t1 vs. uniprot
Match: C3XU17_BRAFL (Uncharacterized protein n=3 Tax=Branchiostoma TaxID=7737 RepID=C3XU17_BRAFL)

HSP 1 Score: 191 bits (485), Expect = 7.630e-56
Identity = 113/265 (42.64%), Postives = 169/265 (63.77%), Query Frame = 0
Query:    3 ILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDDEIEVDEGEFSMPESAKD-APIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGL 266
            +LS+AE  +I  G +D +RSDGRA  D R V +ET V+   SGSAR+R+G  TDILVG+K E+ EP    P EG + F V+CS+ ASP+F GRGG +L+ E+S  L R++ S +T +L  +L II + +CW+L VD LVL+ GGNLF A+SLAV+AAL    +P V V+  + +   EIE+ +  + +     D  P+ VTL+ +G R  ++ D + EEE CS A +T+GV+  G  +G    G+G +D +++  M++    +G+
Sbjct:    7 VLSDAERLFIVHGVQDDLRSDGRACEDYRHVQVETDVVSNTSGSARLRLGN-TDILVGVKAEMGEPDPGRPKEGKLEFFVDCSANASPEFEGRGGEELAIEVSNALQRIFNSKSTLDLT-ALCIIPEGQCWVLFVDVLVLECGGNLFDAVSLAVKAALFNTRIPTV-VVTADDEGQQEIELSDDPYDVKRLDVDNVPLIVTLSKIGHR--HVVDASWEEELCSLARLTVGVTQKGTIAGLNKEGSGSLDPESIYEMIESGKKVGM 266          
BLAST of Gchil10001.t1 vs. uniprot
Match: UPI001939F7FE (exosome complex component RRP42-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI001939F7FE)

HSP 1 Score: 190 bits (482), Expect = 2.030e-55
Identity = 109/277 (39.35%), Postives = 171/277 (61.73%), Query Frame = 0
Query:    3 ILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDDEIEV---DEGEFSMPESAKDAPIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGLDILQATDKFL 276
            IL +AE ++I  G ++ +R+DGR   D R + LE  ++   +GS+R+RIG  T++LVG+K ++  P   SPD+G++ F ++CS  A+P F GRGG DL+A +  LLTR Y ++   +L KSL I+  K CW +HVD L+L+ GGNL  A+S+AV AAL    +PK+ V  G   D+ E+E+   D+   S+P +  + P+ VTL+  G R  Y+ D T+EEEAC  AS+ + +   G+ +     G+G +D  ++S ML     +G+++ +   KFL
Sbjct:    5 ILGDAEKRFIIHGIQEDLRNDGRGCEDYRHIDLEVNLVSNTNGSSRLRIGN-TELLVGVKLDLEMPLANSPDQGLVDFNIDCSPNATPQFQGRGGEDLAATIKSLLTRAYNNNLVLDL-KSLCIVPGKNCWSVHVDVLILECGGNLLDAVSIAVFAALFDTSIPKLGVTEG---DEGEVEINLPDDPLDSIPMNVTNCPVFVTLSKAGQR--YIIDATAEEEACCLASVILSIMKDGRCTALRKDGSGSLDPQSISEMLDVGKRVGINLHKCILKFL 274          
BLAST of Gchil10001.t1 vs. uniprot
Match: E9G2R6_DAPPU (EOG090X0CWA n=20 Tax=Daphnia TaxID=6668 RepID=E9G2R6_DAPPU)

HSP 1 Score: 189 bits (479), Expect = 5.870e-55
Identity = 115/293 (39.25%), Postives = 172/293 (58.70%), Query Frame = 0
Query:    3 ILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVRIGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADLSAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFGALSLAVRAALRVVILPKVTVIPGEADDDDEIEVDEGEFSMPE-SAKDAPIAVTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGIDVDTLSSMLKDATVLGLDILQATDKFLALDMGSRLSGESVQPIGF 294
            +LSEAE  +I  G +D +R DGR  LD RP+ LET ++  ASGSAR+R+   +DILVG+K E+  P    P EG + F V+CS+ A+P+F GRGG DL+ E+ + L R Y S  T  L + LS++  ++CW+L+VD L+L+ GGNL+ A+SLAV++AL    +P + V   + D   E+E+ +  +     + ++ P  VTL  +G+   Y+ D T EEE CS + I + VS   K +     G+G +  D+L SMLK  + +G  +     K L  +    LS    Q +GF
Sbjct:    5 LLSEAEKAFIHHGVQDDLRCDGRTRLDYRPIILETGLVSNASGSARLRLAN-SDILVGVKVELASPLPDKPQEGRLEFFVDCSANATPEFEGRGGEDLANEICRFLQRSYASGDTINLSE-LSVLTGQQCWVLYVDILILECGGNLYDAVSLAVKSALYATQIPSIKVATMDGDQP-ELELSDDPYDTKRLNTENIPCVVTLMKIGNH--YLVDPTPEEECCSSSGIVVAVSGNKKITAVRKIGSGSLHPDSLVSMLKTGSEVGAVVNTILMKKLLEEETLELS----QKVGF 288          
The following BLAST results are available for this feature:
BLAST of Gchil10001.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3IHV9_9FLOR2.440e-16783.45Exosome complex exonuclease RRP42 n=1 Tax=Gracilar... [more]
R7QD87_CHOCR9.350e-13969.73Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A4Y7NMQ1_9CRUS1.400e-5839.93EOG090X0CWA n=1 Tax=Scapholeberis mucronata TaxID=... [more]
A0A4Y7NLX5_9CRUS8.340e-5842.86EOG090X0CWA n=1 Tax=Moina brachiata TaxID=675436 R... [more]
A0A4Y7LPH5_9CRUS2.350e-5740.27EOG090X0CWA n=1 Tax=Eubosmina coregoni TaxID=18618... [more]
F6PLY6_CIOIN2.350e-5737.42Exosome complex component RRP42-like n=1 Tax=Ciona... [more]
A0A2V0PN95_9CHLO4.420e-5642.55Exosome complex component n=1 Tax=Raphidocelis sub... [more]
C3XU17_BRAFL7.630e-5642.64Uncharacterized protein n=3 Tax=Branchiostoma TaxI... [more]
UPI001939F7FE2.030e-5539.35exosome complex component RRP42-like n=1 Tax=Styel... [more]
E9G2R6_DAPPU5.870e-5539.25EOG090X0CWA n=20 Tax=Daphnia TaxID=6668 RepID=E9G2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015847Exoribonuclease, phosphorolytic domain 2PFAMPF03725RNase_PH_Ccoord: 197..259
e-value: 1.7E-6
score: 28.0
IPR027408PNPase/RNase PH domain superfamilyGENE3D3.30.230.70coord: 3..287
e-value: 1.1E-68
score: 233.7
IPR001247Exoribonuclease, phosphorolytic domain 1PFAMPF01138RNase_PHcoord: 30..163
e-value: 6.0E-21
score: 75.3
NoneNo IPR availablePANTHERPTHR11097:SF8EXOSOME COMPLEX COMPONENT RRP42coord: 1..277
NoneNo IPR availablePANTHERPTHR11097EXOSOME COMPLEX EXONUCLEASE RIBOSOMAL RNA PROCESSING PROTEINcoord: 1..277
NoneNo IPR availableCDDcd11367RNase_PH_RRP42coord: 4..277
e-value: 5.75896E-90
score: 267.154
IPR020568Ribosomal protein S5 domain 2-type foldSUPERFAMILY54211Ribosomal protein S5 domain 2-likecoord: 3..223
IPR036345Exoribonuclease, PH domain 2 superfamilySUPERFAMILY55666Ribonuclease PH domain 2-likecoord: 195..287

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:218870..219760 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10001.t1Gchil10001.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004442_pilon 218870..219760 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil10001.t1 ID=Gchil10001.t1|Name=Gchil10001.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=297bp
MQILSEAEGKYIRTGAKDGVRSDGRAMLDIRPVTLETAVLPTASGSARVR
IGKVTDILVGIKPEVTEPSQQSPDEGIISFTVECSSLASPDFVGRGGADL
SAELSQLLTRLYTSSATRELRKSLSIIEDKKCWILHVDALVLDSGGNLFG
ALSLAVRAALRVVILPKVTVIPGEADDDDEIEVDEGEFSMPESAKDAPIA
VTLASLGDRGVYMADCTSEEEACSKASITMGVSPLGKSSGAVLTGTGGID
VDTLSSMLKDATVLGLDILQATDKFLALDMGSRLSGESVQPIGFFS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015847ExoRNase_PH_dom2
IPR027408PNPase/RNase_PH_dom_sf
IPR001247ExoRNase_PH_dom1
IPR020568Ribosomal_S5_D2-typ_fold
IPR036345ExoRNase_PH_dom2_sf