Gchil859.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil859.t1
Unique Name	Gchil859.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	211

Homology

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BLAST of Gchil859.t1 vs. uniprot
Match: A0A2V3IMD9_9FLOR (Chromo domain-containing protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IMD9_9FLOR)

HSP 1 Score: 119 bits (297), Expect = 9.570e-30
Identity = 84/220 (38.18%), Postives = 120/220 (54.55%), Query Frame = 0

Query:    1 MDATLRRYKADFYSRVKATASFAHFDFVLFKKPCIRIMGIADEETSGCKLLPRTIGPFRVFKATYTTVTILNGTLHDTVSIDRATKAPWERTPLPTPQVS------LSDHHAKNLRPTP-AP---VVNSAVLSRERIVWPYLTATINQPGTPTTDMLTDVAIPSELMYDKSCDLVVSKVTDKAVATDGTPIARARWYGFLPLQNSWKPAVEIPHNFTNQF 210
            MDA+ RR KADF + V+AT SFA  D++   KP  +    A+++    KLLP T GPF+V KA   TVTILNGTLHDTVSID  T+   E   +P P  +        + +AK   P   AP   ++N+A  +R+R V   L   +  P  P  D++    +  E   +   + VV K+  +++A +GTPI   RWYGF   + +W+PA  IP+ F   +
Sbjct:    1 MDASQRRDKADFNACVRATPSFARGDYIFHDKPQRKSTKTAEDDAISRKLLPTTTGPFKVLKADEMTVTILNGTLHDTVSIDCVTRDLKESNTVPNPAQTPDEVTPTGEQNAKADPPVDEAPARELMNTAPTTRKRSV---LADPVFAP--PPEDVMHPPEVDEE---NSGREWVVDKIIGQSIAENGTPIVLVRWYGFR--EPTWEPAANIPYKFIAHY 210

The following BLAST results are available for this feature:

BLAST of Gchil859.t1 vs. uniprot

BLAST of Gchil859.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A2V3IMD9_9FLOR	9.570e-30	38.18	Chromo domain-containing protein n=1 Tax=Gracilari...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 208..210

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00000017_pilon	contig	tig00000017_pilon:538438..539070 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil859.t1	Gchil859.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00000017_pilon 538438..539070 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil859.t1 ID=Gchil859.t1|Name=Gchil859.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=211bp
MDATLRRYKADFYSRVKATASFAHFDFVLFKKPCIRIMGIADEETSGCKL
LPRTIGPFRVFKATYTTVTILNGTLHDTVSIDRATKAPWERTPLPTPQVS
LSDHHAKNLRPTPAPVVNSAVLSRERIVWPYLTATINQPGTPTTDMLTDV
AIPSELMYDKSCDLVVSKVTDKAVATDGTPIARARWYGFLPLQNSWKPAV
EIPHNFTNQF*