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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
Seed ortholog | 130081.XP_005703990.1 |
Preferred name | KIN |
PFAMs | Kin17_mid,zf-C2H2_jaz,zf-met |
Max annot lvl | 2759|Eukaryota |
KEGG ko | ko:K13102,ko:K17260 |
KEGG Pathway | ko04138,ko04530,map04138,map04530 |
GOs | GO:0000278,GO:0000375,GO:0000377,GO:0000398,GO:0003674,GO:0003676,GO:0003677,GO:0003690,GO:0003723,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006396,GO:0006397,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0007049,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016070,GO:0016071,GO:0016363,GO:0022402,GO:0031974,GO:0031981,GO:0032991,GO:0033260,GO:0033554,GO:0034399,GO:0034641,GO:0034645,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0044786,GO:0046483,GO:0050896,GO:0051716,GO:0070013,GO:0071704,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901576,GO:1902969,GO:1903047 |
Evalue | 8.03e-68 |
EggNOG OGs | KOG2837@1|root,KOG2837@2759|Eukaryota |
Description | DNA replication |
COG category | A |
BRITE | ko00000,ko00001,ko03041,ko04131,ko04147,ko04812 |
Relationships
This mRNA is a part of the following gene feature(s):
The following stop_codon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following start_codon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
mRNA sequence >Gchil10078.t1 ID=Gchil10078.t1|Name=Gchil10078.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=369bp MCEKQCRDENGFKCHTKSAGHQRQLTMFAESPSEYIGRFSETFRKEFLLV LRQRYGTNFVHANTVYQEYIKDRDHVHMNATKWTTLTAFIKELGKEGHCR VEDREDGWWVAYLAREHFEKERRAKEIRSHTLESEERAALVLREQVNHAK NIGVTRKRHVDVTDSDAANATPVSITLSRKVGKRKVTDQKAPPGAFQSHF FSRGDENASEAGKRGTHSGKWTGFEDAEPENATSEENELDGENAPPGVEG EGAEVPWLHVDTLVKITNKDLANGGFLGKKGRVVKIIEDFGARVQLVDSD TVLELDQDDLETVIPKPGGIVYLLRGTHRGKKAVVRSIDIDKFSVRVELL DTNEELSGIEYEAVSRAA* back to topspliced messenger RNA >Gchil10078.t1 ID=Gchil10078.t1|Name=Gchil10078.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1107bp|location=Sequence derived from alignment at tig00004442_pilon:733232..734338- (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.
ATGTGTGAAAAGCAATGTAGAGATGAAAATGGCTTCAAGTGTCACACAAA AAGTGCCGGACATCAGCGTCAACTTACAATGTTTGCAGAAAGCCCATCAG AGTACATTGGTCGGTTTTCTGAAACATTTCGAAAAGAGTTTTTGCTCGTA CTTCGACAGAGGTACGGTACAAACTTTGTTCACGCGAACACTGTCTATCA GGAGTATATCAAAGATCGAGATCATGTACATATGAATGCTACAAAGTGGA CTACTCTCACCGCTTTTATAAAAGAATTGGGGAAGGAAGGTCACTGTCGC GTGGAGGATAGAGAAGACGGTTGGTGGGTCGCGTACCTTGCGAGAGAGCA CTTTGAAAAGGAAAGAAGGGCAAAAGAAATCCGTTCTCACACTCTAGAAA GTGAAGAAAGAGCTGCTTTAGTTTTACGAGAGCAAGTCAATCACGCGAAG AATATAGGAGTAACTCGAAAAAGACATGTCGATGTCACAGACTCCGACGC TGCGAATGCGACGCCCGTAAGCATCACGTTGTCACGGAAAGTTGGAAAGC GAAAAGTTACTGATCAGAAGGCTCCTCCCGGTGCCTTCCAATCTCATTTC TTCTCGAGAGGCGATGAAAACGCATCAGAAGCGGGGAAAAGAGGAACACA TTCTGGAAAATGGACGGGCTTTGAAGACGCAGAACCTGAGAATGCCACAT CCGAAGAAAACGAGCTTGATGGCGAAAATGCACCCCCAGGCGTAGAAGGT GAAGGAGCTGAAGTCCCATGGCTTCATGTGGACACCCTTGTCAAGATAAC CAACAAAGACCTTGCGAACGGTGGGTTCCTGGGGAAAAAGGGACGGGTCG TAAAGATCATAGAAGACTTTGGAGCGAGAGTGCAACTTGTAGATTCTGAT ACAGTTCTTGAACTGGACCAAGACGACCTTGAGACCGTGATCCCTAAACC AGGAGGCATAGTTTACTTGCTACGGGGTACGCATCGCGGAAAGAAAGCAG TTGTGCGATCTATAGACATAGACAAATTCAGCGTTCGTGTTGAGCTTCTT GACACCAATGAGGAGCTCTCAGGAATTGAGTACGAGGCGGTGTCCCGAGC GGCTTGA back to topprotein sequence of Gchil10078.t1 >Gchil10078.t1 ID=Gchil10078.t1|Name=Gchil10078.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=369bp
MCEKQCRDENGFKCHTKSAGHQRQLTMFAESPSEYIGRFSETFRKEFLLV LRQRYGTNFVHANTVYQEYIKDRDHVHMNATKWTTLTAFIKELGKEGHCR VEDREDGWWVAYLAREHFEKERRAKEIRSHTLESEERAALVLREQVNHAK NIGVTRKRHVDVTDSDAANATPVSITLSRKVGKRKVTDQKAPPGAFQSHF FSRGDENASEAGKRGTHSGKWTGFEDAEPENATSEENELDGENAPPGVEG EGAEVPWLHVDTLVKITNKDLANGGFLGKKGRVVKIIEDFGARVQLVDSD TVLELDQDDLETVIPKPGGIVYLLRGTHRGKKAVVRSIDIDKFSVRVELL DTNEELSGIEYEAVSRAA* back to topmRNA from alignment at tig00004442_pilon:733232..734338- Legend: polypeptideCDSexonstart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below. >Gchil10078.t1 ID=Gchil10078.t1|Name=Gchil10078.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1107bp|location=Sequence derived from alignment at tig00004442_pilon:733232..734338- (Gracilaria chilensis NLEC103_M9 male) ATGTGTGAAAAGCAATGTAGAGATGAAAATGGCTTCAAGTGTCACACAAA
AAGTGCCGGACATCAGCGTCAACTTACAATGTTTGCAGAAAGCCCATCAG
AGTACATTGGTCGGTTTTCTGAAACATTTCGAAAAGAGTTTTTGCTCGTA
CTTCGACAGAGGTACGGTACAAACTTTGTTCACGCGAACACTGTCTATCA
GGAGTATATCAAAGATCGAGATCATGTACATATGAATGCTACAAAGTGGA
CTACTCTCACCGCTTTTATAAAAGAATTGGGGAAGGAAGGTCACTGTCGC
GTGGAGGATAGAGAAGACGGTTGGTGGGTCGCGTACCTTGCGAGAGAGCA
CTTTGAAAAGGAAAGAAGGGCAAAAGAAATCCGTTCTCACACTCTAGAAA
GTGAAGAAAGAGCTGCTTTAGTTTTACGAGAGCAAGTCAATCACGCGAAG
AATATAGGAGTAACTCGAAAAAGACATGTCGATGTCACAGACTCCGACGC
TGCGAATGCGACGCCCGTAAGCATCACGTTGTCACGGAAAGTTGGAAAGC
GAAAAGTTACTGATCAGAAGGCTCCTCCCGGTGCCTTCCAATCTCATTTC
TTCTCGAGAGGCGATGAAAACGCATCAGAAGCGGGGAAAAGAGGAACACA
TTCTGGAAAATGGACGGGCTTTGAAGACGCAGAACCTGAGAATGCCACAT
CCGAAGAAAACGAGCTTGATGGCGAAAATGCACCCCCAGGCGTAGAAGGT
GAAGGAGCTGAAGTCCCATGGCTTCATGTGGACACCCTTGTCAAGATAAC
CAACAAAGACCTTGCGAACGGTGGGTTCCTGGGGAAAAAGGGACGGGTCG
TAAAGATCATAGAAGACTTTGGAGCGAGAGTGCAACTTGTAGATTCTGAT
ACAGTTCTTGAACTGGACCAAGACGACCTTGAGACCGTGATCCCTAAACC
AGGAGGCATAGTTTACTTGCTACGGGGTACGCATCGCGGAAAGAAAGCAG
TTGTGCGATCTATAGACATAGACAAATTCAGCGTTCGTGTTGAGCTTCTT
GACACCAATGAGGAGCTCTCAGGAATTGAGTACGAGGCGGTGTCCCGAGC
GGCTTGA back to topCoding sequence (CDS) from alignment at tig00004442_pilon:733232..734338- >Gchil10078.t1 ID=Gchil10078.t1|Name=Gchil10078.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1107bp|location=Sequence derived from alignment at tig00004442_pilon:733232..734338- (Gracilaria chilensis NLEC103_M9 male) ATGTGTGAAAAGCAATGTAGAGATGAAAATGGCTTCAAGTGTCACACAAA AAGTGCCGGACATCAGCGTCAACTTACAATGTTTGCAGAAAGCCCATCAG AGTACATTGGTCGGTTTTCTGAAACATTTCGAAAAGAGTTTTTGCTCGTA CTTCGACAGAGGTACGGTACAAACTTTGTTCACGCGAACACTGTCTATCA GGAGTATATCAAAGATCGAGATCATGTACATATGAATGCTACAAAGTGGA CTACTCTCACCGCTTTTATAAAAGAATTGGGGAAGGAAGGTCACTGTCGC GTGGAGGATAGAGAAGACGGTTGGTGGGTCGCGTACCTTGCGAGAGAGCA CTTTGAAAAGGAAAGAAGGGCAAAAGAAATCCGTTCTCACACTCTAGAAA GTGAAGAAAGAGCTGCTTTAGTTTTACGAGAGCAAGTCAATCACGCGAAG AATATAGGAGTAACTCGAAAAAGACATGTCGATGTCACAGACTCCGACGC TGCGAATGCGACGCCCGTAAGCATCACGTTGTCACGGAAAGTTGGAAAGC GAAAAGTTACTGATCAGAAGGCTCCTCCCGGTGCCTTCCAATCTCATTTC TTCTCGAGAGGCGATGAAAACGCATCAGAAGCGGGGAAAAGAGGAACACA TTCTGGAAAATGGACGGGCTTTGAAGACGCAGAACCTGAGAATGCCACAT CCGAAGAAAACGAGCTTGATGGCGAAAATGCACCCCCAGGCGTAGAAGGT GAAGGAGCTGAAGTCCCATGGCTTCATGTGGACACCCTTGTCAAGATAAC CAACAAAGACCTTGCGAACGGTGGGTTCCTGGGGAAAAAGGGACGGGTCG TAAAGATCATAGAAGACTTTGGAGCGAGAGTGCAACTTGTAGATTCTGAT ACAGTTCTTGAACTGGACCAAGACGACCTTGAGACCGTGATCCCTAAACC AGGAGGCATAGTTTACTTGCTACGGGGTACGCATCGCGGAAAGAAAGCAG TTGTGCGATCTATAGACATAGACAAATTCAGCGTTCGTGTTGAGCTTCTT GACACCAATGAGGAGCTCTCAGGAATTGAGTACGAGGCGGTGTCCCGAGC GGCTTGA back to top
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