Gchil10060.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil10060.t1
Unique NameGchil10060.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length392
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004442_piloncontigtig00004442_pilon:645825..647000 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil10060Gchil10060Gracilaria chilensis NLEC103_M9 malegenetig00004442_pilon 645825..647000 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10060.t1.start1Gchil10060.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00004442_pilon 645825..645827 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10060.t1.CDS1Gchil10060.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00004442_pilon 645825..647000 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10060.t1.exon1Gchil10060.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00004442_pilon 645825..647000 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10060.t1.stop1Gchil10060.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00004442_pilon 646998..647000 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil10060.t1Gchil10060.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00004442_pilon 645825..647000 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil10060.t1 ID=Gchil10060.t1|Name=Gchil10060.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=392bp
MLLLDGLFDSELDAQLHSLSQYSSKTQVLTQSAALRPKACHPSSHLLPYT
RYTLFVPHLKCGWAAVLVDALWRLLRLRLEPLHADVTLAEAPAFYPPLPA
YVSHPNEDTLEAIRDSSGSILPRIACYVKLCYVNMLCRSLRDEQEALQRW
LSSVEMPDPPKLQLPVPPPRRSRHVIVDAHVVRASSGCVYAYLLGGVLVR
TSLYPHVVEILKSYNILVRGPSESIPVAASLCSLSNSASHRVLEKSIPRA
RGPSHGFVALQTYVKERLATSWTFLCRRVLQHATYLSAEREEKRRSAAIS
RLTAVLREASAVREQLVQQALRFEMIGKPLTDIAAFAVALYRDNEWERIF
EGVSEEHSRDLVNARCKVKQITSLETCDVSTLVQMHKDVGG*
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spliced messenger RNA

>Gchil10060.t1 ID=Gchil10060.t1|Name=Gchil10060.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1176bp|location=Sequence derived from alignment at tig00004442_pilon:645825..647000+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGCTTCTACTAGACGGCCTCTTCGACTCCGAGCTGGACGCCCAGCTGCA
TAGTCTCTCTCAATACTCCTCAAAGACTCAGGTGCTCACTCAGTCGGCCG
CTCTTCGCCCCAAGGCGTGTCACCCCTCCTCCCACCTTCTACCCTACACG
CGATACACGCTCTTCGTTCCCCATCTCAAGTGCGGCTGGGCTGCCGTGCT
GGTCGACGCACTCTGGCGCCTACTCCGTCTGCGTCTTGAACCGCTCCACG
CTGACGTCACTCTCGCCGAGGCTCCCGCTTTCTATCCCCCTCTCCCCGCC
TACGTTTCGCATCCGAACGAGGACACGCTTGAAGCCATCAGAGACAGTTC
TGGCAGTATCCTGCCGCGCATCGCGTGCTATGTCAAATTGTGCTACGTCA
ACATGCTGTGTCGTTCGCTCCGCGATGAACAAGAAGCTCTTCAGCGATGG
TTGTCATCTGTCGAAATGCCGGATCCTCCGAAACTCCAGTTGCCAGTTCC
CCCACCGCGTCGTTCGCGTCATGTAATAGTAGATGCCCATGTAGTGCGTG
CGTCAAGTGGTTGCGTATACGCTTATTTACTTGGCGGCGTCTTGGTGCGC
ACGTCTCTCTATCCTCACGTCGTTGAAATCTTGAAATCGTACAACATTCT
AGTACGCGGCCCATCAGAATCTATTCCAGTGGCTGCCTCGCTCTGTTCTC
TGTCCAATTCCGCTTCTCATCGCGTTTTGGAGAAGAGCATCCCTCGCGCT
CGAGGCCCATCACATGGATTTGTAGCCCTGCAGACCTACGTCAAGGAGCG
TCTTGCTACTTCGTGGACCTTCTTATGCAGGCGGGTATTACAACATGCCA
CTTACTTGTCTGCAGAGCGAGAGGAGAAGCGCCGTTCAGCTGCCATCTCC
CGTTTAACAGCCGTCTTACGTGAAGCATCTGCCGTCCGTGAACAGCTCGT
GCAACAGGCTTTGCGTTTTGAAATGATAGGTAAGCCCTTGACTGATATTG
CAGCATTTGCTGTTGCCTTGTATCGCGATAACGAGTGGGAGCGAATATTT
GAAGGGGTCTCAGAAGAGCATAGTAGGGACCTCGTGAACGCAAGATGTAA
GGTCAAACAAATTACATCTCTGGAAACTTGTGATGTATCTACCCTGGTCC
AAATGCACAAAGACGTTGGGGGATGA
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protein sequence of Gchil10060.t1

>Gchil10060.t1 ID=Gchil10060.t1|Name=Gchil10060.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=392bp
MLLLDGLFDSELDAQLHSLSQYSSKTQVLTQSAALRPKACHPSSHLLPYT
RYTLFVPHLKCGWAAVLVDALWRLLRLRLEPLHADVTLAEAPAFYPPLPA
YVSHPNEDTLEAIRDSSGSILPRIACYVKLCYVNMLCRSLRDEQEALQRW
LSSVEMPDPPKLQLPVPPPRRSRHVIVDAHVVRASSGCVYAYLLGGVLVR
TSLYPHVVEILKSYNILVRGPSESIPVAASLCSLSNSASHRVLEKSIPRA
RGPSHGFVALQTYVKERLATSWTFLCRRVLQHATYLSAEREEKRRSAAIS
RLTAVLREASAVREQLVQQALRFEMIGKPLTDIAAFAVALYRDNEWERIF
EGVSEEHSRDLVNARCKVKQITSLETCDVSTLVQMHKDVGG*
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mRNA from alignment at tig00004442_pilon:645825..647000+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil10060.t1 ID=Gchil10060.t1|Name=Gchil10060.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=1176bp|location=Sequence derived from alignment at tig00004442_pilon:645825..647000+ (Gracilaria chilensis NLEC103_M9 male)
ATGCTTCTACTAGACGGCCTCTTCGACTCCGAGCTGGACGCCCAGCTGCA
TAGTCTCTCTCAATACTCCTCAAAGACTCAGGTGCTCACTCAGTCGGCCG
CTCTTCGCCCCAAGGCGTGTCACCCCTCCTCCCACCTTCTACCCTACACG
CGATACACGCTCTTCGTTCCCCATCTCAAGTGCGGCTGGGCTGCCGTGCT
GGTCGACGCACTCTGGCGCCTACTCCGTCTGCGTCTTGAACCGCTCCACG
CTGACGTCACTCTCGCCGAGGCTCCCGCTTTCTATCCCCCTCTCCCCGCC
TACGTTTCGCATCCGAACGAGGACACGCTTGAAGCCATCAGAGACAGTTC
TGGCAGTATCCTGCCGCGCATCGCGTGCTATGTCAAATTGTGCTACGTCA
ACATGCTGTGTCGTTCGCTCCGCGATGAACAAGAAGCTCTTCAGCGATGG
TTGTCATCTGTCGAAATGCCGGATCCTCCGAAACTCCAGTTGCCAGTTCC
CCCACCGCGTCGTTCGCGTCATGTAATAGTAGATGCCCATGTAGTGCGTG
CGTCAAGTGGTTGCGTATACGCTTATTTACTTGGCGGCGTCTTGGTGCGC
ACGTCTCTCTATCCTCACGTCGTTGAAATCTTGAAATCGTACAACATTCT
AGTACGCGGCCCATCAGAATCTATTCCAGTGGCTGCCTCGCTCTGTTCTC
TGTCCAATTCCGCTTCTCATCGCGTTTTGGAGAAGAGCATCCCTCGCGCT
CGAGGCCCATCACATGGATTTGTAGCCCTGCAGACCTACGTCAAGGAGCG
TCTTGCTACTTCGTGGACCTTCTTATGCAGGCGGGTATTACAACATGCCA
CTTACTTGTCTGCAGAGCGAGAGGAGAAGCGCCGTTCAGCTGCCATCTCC
CGTTTAACAGCCGTCTTACGTGAAGCATCTGCCGTCCGTGAACAGCTCGT
GCAACAGGCTTTGCGTTTTGAAATGATAGGTAAGCCCTTGACTGATATTG
CAGCATTTGCTGTTGCCTTGTATCGCGATAACGAGTGGGAGCGAATATTT
GAAGGGGTCTCAGAAGAGCATAGTAGGGACCTCGTGAACGCAAGATGTAA
GGTCAAACAAATTACATCTCTGGAAACTTGTGATGTATCTACCCTGGTCC
AAATGCACAAAGACGTTGGGGGATGA
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Coding sequence (CDS) from alignment at tig00004442_pilon:645825..647000+

>Gchil10060.t1 ID=Gchil10060.t1|Name=Gchil10060.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=1176bp|location=Sequence derived from alignment at tig00004442_pilon:645825..647000+ (Gracilaria chilensis NLEC103_M9 male)
ATGCTTCTACTAGACGGCCTCTTCGACTCCGAGCTGGACGCCCAGCTGCA
TAGTCTCTCTCAATACTCCTCAAAGACTCAGGTGCTCACTCAGTCGGCCG
CTCTTCGCCCCAAGGCGTGTCACCCCTCCTCCCACCTTCTACCCTACACG
CGATACACGCTCTTCGTTCCCCATCTCAAGTGCGGCTGGGCTGCCGTGCT
GGTCGACGCACTCTGGCGCCTACTCCGTCTGCGTCTTGAACCGCTCCACG
CTGACGTCACTCTCGCCGAGGCTCCCGCTTTCTATCCCCCTCTCCCCGCC
TACGTTTCGCATCCGAACGAGGACACGCTTGAAGCCATCAGAGACAGTTC
TGGCAGTATCCTGCCGCGCATCGCGTGCTATGTCAAATTGTGCTACGTCA
ACATGCTGTGTCGTTCGCTCCGCGATGAACAAGAAGCTCTTCAGCGATGG
TTGTCATCTGTCGAAATGCCGGATCCTCCGAAACTCCAGTTGCCAGTTCC
CCCACCGCGTCGTTCGCGTCATGTAATAGTAGATGCCCATGTAGTGCGTG
CGTCAAGTGGTTGCGTATACGCTTATTTACTTGGCGGCGTCTTGGTGCGC
ACGTCTCTCTATCCTCACGTCGTTGAAATCTTGAAATCGTACAACATTCT
AGTACGCGGCCCATCAGAATCTATTCCAGTGGCTGCCTCGCTCTGTTCTC
TGTCCAATTCCGCTTCTCATCGCGTTTTGGAGAAGAGCATCCCTCGCGCT
CGAGGCCCATCACATGGATTTGTAGCCCTGCAGACCTACGTCAAGGAGCG
TCTTGCTACTTCGTGGACCTTCTTATGCAGGCGGGTATTACAACATGCCA
CTTACTTGTCTGCAGAGCGAGAGGAGAAGCGCCGTTCAGCTGCCATCTCC
CGTTTAACAGCCGTCTTACGTGAAGCATCTGCCGTCCGTGAACAGCTCGT
GCAACAGGCTTTGCGTTTTGAAATGATAGGTAAGCCCTTGACTGATATTG
CAGCATTTGCTGTTGCCTTGTATCGCGATAACGAGTGGGAGCGAATATTT
GAAGGGGTCTCAGAAGAGCATAGTAGGGACCTCGTGAACGCAAGATGTAA
GGTCAAACAAATTACATCTCTGGAAACTTGTGATGTATCTACCCTGGTCC
AAATGCACAAAGACGTTGGGGGATGA
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