Gchil7131.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7131.t1
Unique NameGchil7131.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length396
Homology
BLAST of Gchil7131.t1 vs. uniprot
Match: A0A2V3IP23_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP23_9FLOR)

HSP 1 Score: 222 bits (566), Expect = 1.490e-65
Identity = 176/419 (42.00%), Postives = 233/419 (55.61%), Query Frame = 0
Query:    1 MDQLRVRLGQLVGVETHPVRIMEHRTFNRLMYRNRNQHRHGFYFRKLEEVRRILRKIQGHVAWASIRNAVDSKITKKRKSLTAIPLALSSVTHGDLMSLKILYNHLVGTVIPSAAEKVTVELVGRSHFLPFAVTMLSILARLHVLEKNIFKQLQGAIVEVELLLFVQTSSPEEQNLPNSNSGEDRNN---EDLGTEIDSSQGSRVEQKSSGV-FAIELKTMP-VNSSLP---KNLDTTKTSFAPVPSKRRKLCSETENVQISE----SKSLYERISTSAYAIPMNVTFANRAAVSTP---QLSS---VQRDAATSKVTNEEQTHFKHN------QSGKENDLVAHPINRCVSLQREHPDAIRSERFDAECTMRGNKASITRPEVLADENTIHKIHTAPVPEVDSSDSEDLDDIFGVLED 395
            M+Q+R+R  +L+ +E H +R  EHRTF+RLMYRNRNQHRHGFYFRKLEEVRRILR+IQ HVAW SIR AV  K  +KRK+    PLALSSVTH D+ SL+ LY+  V   IPSAA +VT ELV RSHFLPFAVTM+S+L+R++VLEK I ++L+GA +E+ LL  VQ     EQ  PN+    D      ED+GTE+   +  +  + S     A E+ ++P  NSS     K  D+ K +F+          S TE+  I E     K++Y+ +S+ A           RA VS P   + SS    QRD+ ++ ++ E QT    +      +  KE +      N C++      D  RSE      T+  N+                     P  E  SSDSEDLDDIFG L+D
Sbjct:    1 MEQIRIRFQELLSIEKHSIRTTEHRTFSRLMYRNRNQHRHGFYFRKLEEVRRILRRIQQHVAWNSIRQAVTIKGIEKRKAPKNAPLALSSVTHDDIKSLETLYSRFVLETIPSAAIQVTNELVSRSHFLPFAVTMVSMLSRIYVLEKKILQELRGASLELGLLFSVQ-----EQADPNNIHSRDIEGYLVEDVGTEVALLENDQTTKCSVPTPIAKEVISLPQTNSSTQIQDKTHDSVKLNFSE---------SRTESESIPEPPTDDKNIYDLVSSKASEPQFPTMRMGRAKVSIPVSYKFSSGVIEQRDSQSNSIS-EVQTRKSSSKCRTVQEKCKEEEDGGLNGNGCLAS-----DGKRSEMNQKAATVAPNQ---------------------PAEESGSSDSEDLDDIFGALDD 378          
BLAST of Gchil7131.t1 vs. uniprot
Match: A0A7S2Z5X8_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S2Z5X8_9CHLO)

HSP 1 Score: 57.0 bits (136), Expect = 4.120e-6
Identity = 41/116 (35.34%), Postives = 67/116 (57.76%), Query Frame = 0
Query:   30 LMYRNRNQHRHGFYFRKLEEVRRILRKIQGHVAWASIRNAVDSKITKKRKSLTAIPLALSSVTHGDLMSLKILYNHLVGTVIPSAAEKVTVELVGRSHFLPFAVTMLSILARLHVL 145
            L+ +NRNQHR G YF++LE VR   +K      W+S       + +  + SL   P+AL+      L++   L+   +G ++  AA  +T  L+ R+HF+PF++ +L+ILARL +L
Sbjct:   31 LLAKNRNQHRRGRYFKELEMVRAASKKFLVRQQWSSENEEAGGEGSAVQ-SLALTPVALARRRKEVLVNC--LHLERLGLLVSRAASTLT-ALLARTHFMPFSLALLTILARLRLL 142          
The following BLAST results are available for this feature:
BLAST of Gchil7131.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3IP23_9FLOR1.490e-6542.00Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A7S2Z5X8_9CHLO4.120e-635.34Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027951Domain of unknown function DUF4477PFAMPF14780DUF4477coord: 23..153
e-value: 1.2E-6
score: 28.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 173..198

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:308083..309270 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7131.t1Gchil7131.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 308083..309270 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7131.t1 ID=Gchil7131.t1|Name=Gchil7131.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=396bp
MDQLRVRLGQLVGVETHPVRIMEHRTFNRLMYRNRNQHRHGFYFRKLEEV
RRILRKIQGHVAWASIRNAVDSKITKKRKSLTAIPLALSSVTHGDLMSLK
ILYNHLVGTVIPSAAEKVTVELVGRSHFLPFAVTMLSILARLHVLEKNIF
KQLQGAIVEVELLLFVQTSSPEEQNLPNSNSGEDRNNEDLGTEIDSSQGS
RVEQKSSGVFAIELKTMPVNSSLPKNLDTTKTSFAPVPSKRRKLCSETEN
VQISESKSLYERISTSAYAIPMNVTFANRAAVSTPQLSSVQRDAATSKVT
NEEQTHFKHNQSGKENDLVAHPINRCVSLQREHPDAIRSERFDAECTMRG
NKASITRPEVLADENTIHKIHTAPVPEVDSSDSEDLDDIFGVLED*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027951DUF4477