Gchil7092.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7092.t1
Unique NameGchil7092.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length224
Homology
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BLAST of Gchil7092.t1 vs. uniprot
Match: A0A2V3J3G2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3G2_9FLOR)

HSP 1 Score: 216 bits (549), Expect = 1.650e-67
Identity = 109/190 (57.37%), Postives = 139/190 (73.16%), Query Frame = 0 
Query:   24 IHALCIQGTVANPSDDDFGSLQVAAYARDGKLETSASVTANATFNLFLKPGGATPYILHLLGSIQNQYHPIILYVDPLRVLFSKVRYSPLQRLNLTTVGAEDMNTAVHFEPSAPTLHALKRKQRRFSVRTLWAYRLQALMLAGAVFIIWFPKFIRDLPKEVREELLGEKEDEMGDPNALFKSLFGIQDDS 213
            +H+L I GT+A P DD   +LQVAAY RDGKL +SA++TANATF LFL+    T YIL+LLGSI+N Y P+I+ V+P +VL + VR SPLQ L       ED+ T VHF P  PT  + KR  +R+S R LWAYR+ AL+L GAVFI+WFPK IRDLP +VR ELLGE ++E  DPNA+FK+L G+Q+D+
Sbjct:   23 VHSLTINGTLATPCDDPVSALQVAAYGRDGKLASSAAITANATFRLFLQVSERTHYILYLLGSIENHYDPLIVDVEPHQVLLAHVRKSPLQ-LPPKASNQEDVTTVVHFVPGNPTRFSRKRMNKRWSWRNLWAYRMHALLLTGAVFIVWFPKIIRDLPSDVRAELLGEHQEEPLDPNAVFKALSGLQEDN 211
[Close]
BLAST of Gchil7092.t1 vs. uniprot
Match: A0A2V3IG16_9FLOR (Uncharacterized protein n=2 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IG16_9FLOR)

HSP 1 Score: 110 bits (276), Expect = 1.050e-27
Identity = 62/115 (53.91%), Postives = 81/115 (70.43%), Query Frame = 0 
Query:    1 MPNLSRGTAILLIAIV----LNYTARQIHALCIQGTVANPSDDDFGSLQVAAYARDGKLETSASVTANATFNLFLKPGGATPYILHLLGSIQNQYHPIILYVDPLRVLFSKVRYS 111
            M +L   +A++LI++     +  TA   HAL ++ TVA P DD   SLQVAAYA +G+LE+SA+VTA A+FNLFLK    T Y+LHLLG+IQNQYHPI+L V+P  VL S +R S
Sbjct:    1 MRSLRATSAVVLISVAASLTVTLTATLSHALRVRRTVATPCDDVLSSLQVAAYAPNGRLESSAAVTARASFNLFLKLATTTHYVLHLLGAIQNQYHPIMLQVNPDHVLLSHMRPS 115
The following BLAST results are available for this feature:
BLAST of Gchil7092.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A2V3J3G2_9FLOR1.650e-6757.37Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
A0A2V3IG16_9FLOR1.050e-2753.91Uncharacterized protein n=2 Tax=Gracilariopsis cho... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..26
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 27..153
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 174..223
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 154..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 18..26
NoneNo IPR availableTMHMMTMhelixcoord: 154..173

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:64908..65579 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7092.t1Gchil7092.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 64908..65579 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7092.t1 ID=Gchil7092.t1|Name=Gchil7092.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=224bp
MPNLSRGTAILLIAIVLNYTARQIHALCIQGTVANPSDDDFGSLQVAAYA
RDGKLETSASVTANATFNLFLKPGGATPYILHLLGSIQNQYHPIILYVDP
LRVLFSKVRYSPLQRLNLTTVGAEDMNTAVHFEPSAPTLHALKRKQRRFS
VRTLWAYRLQALMLAGAVFIIWFPKFIRDLPKEVREELLGEKEDEMGDPN
ALFKSLFGIQDDSNQQATKSKAA*
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