Gchil7209.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7209.t1
Unique NameGchil7209.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length341
Homology
BLAST of Gchil7209.t1 vs. uniprot
Match: A0A2V3J0C4_9FLOR (F-box only protein 9 n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J0C4_9FLOR)

HSP 1 Score: 441 bits (1135), Expect = 9.500e-153
Identity = 222/341 (65.10%), Postives = 260/341 (76.25%), Query Frame = 0
Query:    6 TEPKPWLQLYQTDFANLRSLYNNKHNLHD----QPLSRLPTSESSTDEQ--EQQQPKLDILSLPGEVLSTICSHLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVRDLCGKPVSSDRDEVRPVVGSYTFDEIRRGVSVVLPMQHPKFPNMRGGHNVMEFTLSSTVDGAFDRLHLVNHFAVMDGSSDSGNSLVSYTGDSYIEKPFRLIPLLGFRDRVYREFPTDDALDLAQWYEMKKAARAEQKNKRSHR 340
            T  +PW  LYQTDFA LRS    +H L      +P S    +++  D +   Q + K DI SLP EVLSTICS L+AE L  LAQVNS LISHAYDPKHWRRIAR TWPSE  ++L KHLY+YKTWR+LCTQRPR+RTNALFVL+HQFTKTA+RFAASEPQAPVFLVTYYRFLRFYTSGTV+ LTTPEAPH+AYRRVR   G+    D+DE RP+ GSY+FDE  R V + LPM+H KFPNMR G   M+F L ST  GA+DRL+L +HFA+M+ S   G+S + Y  D + +KPFRL+PLLGFRDR+YREFP +D  DLAQWYEMKKAARAEQKN+R  R
Sbjct:    4 TASRPWFHLYQTDFARLRSSQEKEHGLFQSSDAEPYSSGSPTQAEQDSECDSQTESKFDITSLPAEVLSTICSFLEAEQLCNLAQVNSALISHAYDPKHWRRIARETWPSECERELRKHLYSYKTWRLLCTQRPRLRTNALFVLQHQFTKTASRFAASEPQAPVFLVTYYRFLRFYTSGTVMSLTTPEAPHLAYRRVRTFHGRASGPDKDETRPLTGSYSFDESTRQVRIELPMKHHKFPNMRSGKVFMDFDLHSTTHGAYDRLYLRSHFAMMEDSDFGGDSNILYPCDWFEDKPFRLVPLLGFRDRIYREFPKNDDRDLAQWYEMKKAARAEQKNRRGCR 344          
BLAST of Gchil7209.t1 vs. uniprot
Match: R7QL31_CHOCR (F-box domain-containing protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QL31_CHOCR)

HSP 1 Score: 345 bits (886), Expect = 5.020e-115
Identity = 181/328 (55.18%), Postives = 220/328 (67.07%), Query Frame = 0
Query:    8 PKPWLQLYQTDFANLRSLYNNKHNL---HDQPLSRLPTSESSTDEQEQQQPKLDILSLPGEVLSTICSHLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVRDLCGKPVSS-DRDEVRPVVGSYTFDEIRRGVSVVLPMQHPKFPNMRGGHNVMEFTLSSTVDGAFDRLHLVNHFAVMDGSSDSGNSLVSYTGDSYIEKPFRLIPLLGFRDRVYREFPTDDALDLAQWYEMKKAARA 331
            PKPWL L+QTDF +L              DQP    P SE+     E   P   +LSLP EVL++I S L+ EHLS  AQV +  +SHAY+P+HWRRIAR TWP +    LE  LY YKTWR+L T+RPR+RTNA++V RHQ+ KT++R A +EPQAPVFLVTYYR LRFYT GTV+ LT+PE PH+AY+RVR      +SS DRD+  P +G+Y  DE    V V LPM  PKFP MR G   M F+L+ TV GAFDRL L  H+A+MD     G  +VSY       KPFRL+P+LGFRD+VYREFP DD  DL QWYEMK+A+RA
Sbjct:    7 PKPWLGLFQTDFVSLLEEPKRPSPAALPSDQPE---PRSEAGPSTDEPAAPVYTVLSLPSEVLNSIFSRLEPEHLSAAAQVCNKWLSHAYEPRHWRRIARRTWPGDDAASLEHMLYEYKTWRLLATRRPRLRTNAIYVSRHQYAKTSSRAATAEPQAPVFLVTYYRLLRFYTDGTVVALTSPELPHVAYKRVRRWHSSALSSVDRDKPAPSIGTYELDERSLDVRVALPMSQPKFPAMRTGTMYMRFSLAGTVSGAFDRLFLTEHYAIMD---HDGGDVVSYGSHELHGKPFRLVPVLGFRDKVYREFPLDDHKDLEQWYEMKRASRA 328          
BLAST of Gchil7209.t1 vs. uniprot
Match: A0A7V5M4I4_9BACT (F-box protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A7V5M4I4_9BACT)

HSP 1 Score: 107 bits (267), Expect = 8.600e-23
Identity = 85/294 (28.91%), Postives = 135/294 (45.92%), Query Frame = 0
Query:    4 AETEPKPWLQLYQTDFANLRSLYNNKHNLHDQPLSRLPTSESSTDEQEQQQPKLDILS----LPGEVLSTICSHLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTWPS-ESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVRDLCGKPV------------SSDRDEVRPVVGSYTFDEIRRGVSVVLPMQHPKFPNMRGGHNVMEFTLSSTVD---GAFDRLHLVNHFAVM-DGSS 276
            +ET  +PW  LY       + +   +H    +  +    ++ ST   EQ  P    LS    LPG+VL +I   L    L+++++V    +S A+DP  WRR     W   ES  +L      Y  WR +   R  ++ + L++ + Q+ +          +  VF +++YR+LRF+  G V+G+TTPE P ++  R++    +               +  D+V P VG Y FDE  R VSV LP+  P++  M+G        LS       GA D L L+ H  +  DGS+
Sbjct:   13 SETLVRPWFALYH------QRVPRERHCEDCESTTDAADNKLSTARVEQSGPAKTNLSPVEQLPGDVLRSIFELLSPADLASVSRVCRTFLSIAFDPALWRRHCLEAWGDRESLTRLTAAACGYGGWRRMLRSRAHLQFHGLYIQKQQYLRIGGDDGTGSRR--VFFISFYRYLRFFPGGKVVGMTTPEDPLVSRARLQSTRWEASHQSWHHENNAGPGAGTDQVVPAVGDYQFDEKTRMVSVTLPIYQPRYAEMQGALACYVLELSDADGRPRGANDMLRLLEHSTLSADGSA 298          
BLAST of Gchil7209.t1 vs. uniprot
Match: A0A7J7IFV3_9RHOD (F-box domain-containing protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IFV3_9RHOD)

HSP 1 Score: 89.7 bits (221), Expect = 1.020e-16
Identity = 68/232 (29.31%), Postives = 106/232 (45.69%), Query Frame = 0
Query:   62 LPGEVLSTICSHLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTW-PSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVRDL-CGKPVSSDR-----------DEVRPVVGSYTFDEIRRGVSVVLPMQHPKFPNMRGGHNVMEFTLSSTVD---GAFDRLHLVNHFAVM-DGSS 276
            LP ++L  I   L    L+T+++V     + +++P  WRR     W   E    L      Y  WR +   R  +  + L++ + Q+ +          +  VF V++YR+LRF+  G V+G+TTPE P  +  R++      P+ S R           D+V PV G Y  DE  R V+V LP+  P++  M+G        LS       GA D L L+ H  +  DGS+
Sbjct:   22 LPVDLLRRIFQLLSPADLATVSRVCRTFFTVSFEPALWRRHCLDAWGDKEPLVDLTARACRYGGWRRMYRSRSHLHFHGLYIQKQQYLRIGGDDGTGTRR--VFFVSFYRYLRFFPGGKVLGMTTPEDPLASRARLQTTRWDTPMQSQRSEIAAGGVACSDQVVPVAGEYLLDEQSRIVTVTLPIHQPRYAEMQGALVCYVLALSDADGRPRGANDLLKLLEHSTLSADGSA 251          
BLAST of Gchil7209.t1 vs. uniprot
Match: A0A6G4ZYX0_RHIMP (Putative f-box only protein 9 n=8 Tax=Ixodidae TaxID=6939 RepID=A0A6G4ZYX0_RHIMP)

HSP 1 Score: 74.3 bits (181), Expect = 3.630e-11
Identity = 48/164 (29.27%), Postives = 76/164 (46.34%), Query Frame = 0
Query:   39 RLPTSESSTDEQEQQQPKLDILSLPGEVLS-----TICSHLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVR 197
            ++ TS ++      +Q    I  LP EV        + S LD   L  +++V  G    A DP+ W      TW     Q     L  Y +WR +   RPR+  N +++ R  + +            P FLV Y+R+LRF+T G V+ LTTP+ P+++  ++R
Sbjct:  104 KMETSSANVCSVALEQKATHISDLPREVFMFILRWVVSSDLDILSLEAVSKVCRGFYLCARDPELWHTACIRTWGEGCGQ-----LNQYDSWREMYICRPRICHNGVYINRTTYVRHGESSFQDSSYRPCFLVEYFRYLRFFTDGVVLMLTTPDNPYVSLGKLR 262          
BLAST of Gchil7209.t1 vs. uniprot
Match: UPI0018957EA4 (F-box only protein 9-like isoform X1 n=5 Tax=Rhipicephalus TaxID=34630 RepID=UPI0018957EA4)

HSP 1 Score: 72.4 bits (176), Expect = 1.720e-10
Identity = 50/167 (29.94%), Postives = 77/167 (46.11%), Query Frame = 0
Query:   39 RLPTSESSTDEQEQQQPKLDILSLPGEVLS-----TICSHLDA---EHLSTLAQVNSGLISHAYDPKHWRRIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVR 197
            ++ TS ++      +Q    I  LP EV        + S LD    E +S   QV  G    A DP+ W      TW  +  Q     L  Y +WR +   RPR+  N +++ R  + +            P FLV Y+R+LRF+T G V+ LTTP+ P+++  ++R
Sbjct:  117 KMRTSSANVCSVALEQKATHISDLPREVFMFILRWVVSSDLDILSLEAVSKSMQVCRGFYLCARDPELWHTACVRTWGEDCGQ-----LNQYDSWREMYICRPRICYNGVYINRTTYVRHGESSFQDSSYRPCFLVEYFRYLRFFTDGVVLMLTTPDNPYVSLGKLR 278          
BLAST of Gchil7209.t1 vs. uniprot
Match: UPI001CFBAE94 (F-box only protein 9 n=1 Tax=Protopterus annectens TaxID=7888 RepID=UPI001CFBAE94)

HSP 1 Score: 70.5 bits (171), Expect = 8.630e-10
Identity = 47/144 (32.64%), Postives = 70/144 (48.61%), Query Frame = 0
Query:   59 ILSLPGEVLS-----TICSHLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVR 197
            I  LP EV++      + S LD   L  L+ V  G    A DP+ WR I    W   SN+     L  Y +WR +  +RPR+R + +++ +  + +          +A    V YYR+LRF++ G V+ LTTPE P     R+R
Sbjct:  177 ISDLPWEVVAYIFRWVVSSELDVRSLEQLSLVCRGFYICARDPEIWRLICLKVWGRSSNK-----LLPYTSWRQMFLERPRVRFDGVYISKTTYIRQGEESLDGFYRA-WHQVEYYRYLRFFSDGQVMMLTTPEEPQTIVGRLR 314          
BLAST of Gchil7209.t1 vs. uniprot
Match: UPI000E1E0E81 (F-box only protein 9 isoform X3 n=2 Tax=Aves TaxID=8782 RepID=UPI000E1E0E81)

HSP 1 Score: 68.6 bits (166), Expect = 3.280e-9
Identity = 48/154 (31.17%), Postives = 74/154 (48.05%), Query Frame = 0
Query:   54 QPKLDILS-----LPGEVLS-----TICSHLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVR 197
            QP+LD+       LP EVL       + S LD   L  L+ V  G    A DP+ W ++    W    N+     L  Y +WR +  +RPR+R + +++ +  + +   +      +A    V YYR+LRF++ G V+ LTTPE P     R+R
Sbjct:  165 QPELDVSQTHISVLPMEVLMYIFRWVVSSDLDLRSLEQLSLVCRGFYICARDPEIWHQVCLKVWGRSCNK-----LVPYASWREMFLERPRVRFDGVYISKTTYIRQGEQSLDGFYRA-WHQVEYYRYLRFFSDGQVMMLTTPEDPQSIVPRLR 312          
BLAST of Gchil7209.t1 vs. uniprot
Match: A0A7I8VFN7_9ANNE (DgyrCDS4115 n=1 Tax=Dimorphilus gyrociliatus TaxID=2664684 RepID=A0A7I8VFN7_9ANNE)

HSP 1 Score: 68.6 bits (166), Expect = 3.510e-9
Identity = 41/134 (30.60%), Postives = 64/134 (47.76%), Query Frame = 0
Query:   61 SLPGEVLSTICS-----HLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAP 189
            +LP E+++ I       HLD E L  L  V  GL   + D K WR I +  W    +      +  Y  WR +   RP +R N +++ +  + +     +      P  +V YYR++RFY+ G V+ LT+PE P
Sbjct:  160 NLPPEIIAHIIKWVVGKHLDVESLENLGMVCRGLFVSSRDEKIWRGICQQIWGINCSS-----VKKYGCWRNMYIHRPHLRYNGVYISKMSYLRQG-EVSLDGLYNPFHIVEYYRYVRFYSDGRVVHLTSPEHP 287          
BLAST of Gchil7209.t1 vs. uniprot
Match: A0A5E4QA60_9NEOP (FBO_C domain-containing protein n=1 Tax=Leptidea sinapis TaxID=189913 RepID=A0A5E4QA60_9NEOP)

HSP 1 Score: 67.8 bits (164), Expect = 6.960e-9
Identity = 46/150 (30.67%), Postives = 69/150 (46.00%), Query Frame = 0
Query:   62 LPGEVLSTIC-----SHLDAEHLSTLAQVNSGLISHAYDPKHWRRIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKTATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAP-----HIAYRRVRDLCG 201
            LP EV+  I      S LDA  L  +A V  GL   A +   WR I   TW  +         + + +WR +  +RPR+  N  ++ +  + +            P +LV YYR+LRF++ G V+ LTT E P     H+ +R  R+  G
Sbjct:  200 LPYEVIQLIVRWVVSSDLDAVSLERVAGVCRGLYVTAREQDIWRSICVKTWGIDCGSP---RAHNFASWRQMYIERPRLNLNGCYISKTTYLRHGENSFQDHFYRPWYLVEYYRYLRFFSDGLVLMLTTAEEPTSALPHLKHRLARNNLG 346          
The following BLAST results are available for this feature:
BLAST of Gchil7209.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J0C4_9FLOR9.500e-15365.10F-box only protein 9 n=1 Tax=Gracilariopsis chorda... [more]
R7QL31_CHOCR5.020e-11555.18F-box domain-containing protein n=1 Tax=Chondrus c... [more]
A0A7V5M4I4_9BACT8.600e-2328.91F-box protein n=2 Tax=cellular organisms TaxID=131... [more]
A0A7J7IFV3_9RHOD1.020e-1629.31F-box domain-containing protein n=1 Tax=Cyanidioco... [more]
A0A6G4ZYX0_RHIMP3.630e-1129.27Putative f-box only protein 9 n=8 Tax=Ixodidae Tax... [more]
UPI0018957EA41.720e-1029.94F-box only protein 9-like isoform X1 n=5 Tax=Rhipi... [more]
UPI001CFBAE948.630e-1032.64F-box only protein 9 n=1 Tax=Protopterus annectens... [more]
UPI000E1E0E813.280e-931.17F-box only protein 9 isoform X3 n=2 Tax=Aves TaxID... [more]
A0A7I8VFN7_9ANNE3.510e-930.60DgyrCDS4115 n=1 Tax=Dimorphilus gyrociliatus TaxID... [more]
A0A5E4QA60_9NEOP6.960e-930.67FBO_C domain-containing protein n=1 Tax=Leptidea s... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001810F-box domainPFAMPF12937F-box-likecoord: 59..103
e-value: 7.1E-6
score: 25.8
IPR001810F-box domainPROSITEPS50181FBOXcoord: 56..102
score: 11.00765
NoneNo IPR availableGENE3D1.20.1280.50coord: 45..140
e-value: 1.6E-7
score: 33.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 33..56
NoneNo IPR availablePANTHERPTHR12874:SF9F-BOX ONLY PROTEIN 9coord: 38..191
IPR045464F-box protein Hrt3/FBXO9, C-terminalPFAMPF19270FBO_Ccoord: 123..270
e-value: 3.1E-16
score: 59.7
IPR045118F-box only protein FBXO9/FBXO48PANTHERPTHR12874F-BOX ONLY PROTEIN 48-RELATEDcoord: 38..191
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 48..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:543743..544765 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7209.t1Gchil7209.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 543743..544765 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7209.t1 ID=Gchil7209.t1|Name=Gchil7209.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=341bp
MVAAETEPKPWLQLYQTDFANLRSLYNNKHNLHDQPLSRLPTSESSTDEQ
EQQQPKLDILSLPGEVLSTICSHLDAEHLSTLAQVNSGLISHAYDPKHWR
RIARSTWPSESNQQLEKHLYAYKTWRVLCTQRPRMRTNALFVLRHQFTKT
ATRFAASEPQAPVFLVTYYRFLRFYTSGTVIGLTTPEAPHIAYRRVRDLC
GKPVSSDRDEVRPVVGSYTFDEIRRGVSVVLPMQHPKFPNMRGGHNVMEF
TLSSTVDGAFDRLHLVNHFAVMDGSSDSGNSLVSYTGDSYIEKPFRLIPL
LGFRDRVYREFPTDDALDLAQWYEMKKAARAEQKNKRSHR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001810F-box_dom
IPR045464Hrt3/FBXO9_C
IPR045118FBXO9/FBXO48
IPR036047F-box-like_dom_sf