Gchil7245.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7245.t1
Unique NameGchil7245.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length255
Homology
BLAST of Gchil7245.t1 vs. uniprot
Match: A0A2V3J428_9FLOR (Ribosome maturation protein SDO1-like n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J428_9FLOR)

HSP 1 Score: 356 bits (913), Expect = 7.560e-122
Identity = 183/228 (80.26%), Postives = 204/228 (89.47%), Query Frame = 0
Query:    1 MPEMLVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSFQTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVYLDGCPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYRDKAKYDVEIHSYELLMSDLARVTKGDFEFNLITNAAA 228
            MP+MLVRLKKGK TYEV+V EGMVAKYRDGTVKRIEDVVVTP+VFTN +KG+KASSEQL+ SFQT DVM++I+ IL+KGEAQESAGERKSKMDAKR EI+S IQKNY+  DG PLP+VRIENAL QIRPRIDVDVDA RQV AMY KLSAVMPMKK   G+EGTVIV T +AGQVSG++RKH TVLRE+Y DKAKYDV+IHSY+LLM DLARVTKGDFEF+L TNAAA
Sbjct:    1 MPDMLVRLKKGKKTYEVLVVEGMVAKYRDGTVKRIEDVVVTPIVFTNSTKGSKASSEQLSDSFQTSDVMEVIKLILQKGEAQESAGERKSKMDAKRQEIISVIQKNYIAPDGRPLPVVRIENALEQIRPRIDVDVDAERQVTAMYSKLSAVMPMKKNSGGMEGTVIVSTALAGQVSGIIRKHATVLRESYSDKAKYDVDIHSYDLLMKDLARVTKGDFEFSLATNAAA 228          
BLAST of Gchil7245.t1 vs. uniprot
Match: A0A7S3A2T3_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A2T3_9RHOD)

HSP 1 Score: 188 bits (478), Expect = 7.550e-56
Identity = 106/226 (46.90%), Postives = 144/226 (63.72%), Query Frame = 0
Query:    1 MPEMLVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSFQTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVY-LDGCPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYRDKAK---YDVEIHSYELLMSDLARVTKGDFEFNL 222
            MP+MLVR KKGKT +E++ +EG V++YRDGT+K  +DVVV  V+FTN SKG +AS EQL S+F TDD+ Q +E+IL  GE Q S  ERK+K++ KR EIV   +K YV      PLP  RI+ AL Q + R+D D  A RQ      K+ AVMPM K  S L+GT+ +P    G   G V K+C V+++ Y  +       V    Y++L+SDL + TKG+F F++
Sbjct:    1 MPDMLVRYKKGKTNFEIVTKEGKVSQYRDGTIKNTDDVVVANVIFTNHSKGERASDEQLRSAFDTDDLSQCLEKILLTGEPQLSVAERKAKVEQKRKEIVDYFRKYYVEPRTKLPLPAQRIDAALTQAKIRVDPDTPAARQAADAASKVVAVMPMSK--STLDGTIKIPHQYIGSAMGSVSKYCQVVKDGYTSEGSSITVSVAPGDYDMLISDLTKATKGNFTFDI 224          
BLAST of Gchil7245.t1 vs. uniprot
Match: M2W0Y8_GALSU (Uncharacterized protein n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2W0Y8_GALSU)

HSP 1 Score: 173 bits (439), Expect = 5.220e-50
Identity = 97/223 (43.50%), Postives = 145/223 (65.02%), Query Frame = 0
Query:    4 MLVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSFQTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVY-LDGCPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYRDKA-KYDVEI--HSYELLMSDLARVTKGDFEFNL 222
            MLVR + GKTT+E++ +EG V KYR G +K +EDV+++  +FT+++K  KA + +L ++FQTD +   +E IL+KGE Q S+ ERK K++ ++ EIV+ I K Y+      P P+ RIENAL + + R+D D+   RQ+  +  KL  V+P+KK  + LEG + VP    G  S V+ K+ TV RE+Y      YD+ I    Y+L MS++ RVTKG+FEFN+
Sbjct:    1 MLVRYRVGKTTFELVTKEGTVQKYRKGEIKSLEDVLLSDTIFTSYAKREKAGTNELKAAFQTDSLQSCVETILQKGEVQISSAERKEKLEKRKKEIVNFIHKYYIDPAKKLPHPMSRIENALEECKIRVDADIPVERQIPDIVSKLVNVIPLKK--TTLEGQLKVPHSSIGAASSVIAKYVTVERESYSSHGCTYDIGIIPGEYDLFMSEINRVTKGNFEFNV 221          
BLAST of Gchil7245.t1 vs. uniprot
Match: M1VF53_CYAM1 (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=M1VF53_CYAM1)

HSP 1 Score: 164 bits (415), Expect = 2.200e-46
Identity = 97/231 (41.99%), Postives = 148/231 (64.07%), Query Frame = 0
Query:    3 EMLVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSF-QTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVY-LDGCPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYRDK-AKYDVEIH--SYELLMSDLARVTKGDFEFNLITNAAA 228
            EMLVR + GK T+EV    G V KYR+GT+K +++V+V+ VVFT++ K  +AS  +L S F +  +  +++++IL+KG+ Q SA ER+ K++ KR+EI+  + KN+V      P+P +RIE AL  +RPRID+D  A RQV  M  KLSA MPMKK++  +EGT+ VP  + G  + V+R +CTV RE Y  + A  ++ I    Y+  +  L   +KG+F  ++   AA+
Sbjct:    4 EMLVRYRSGKETFEVATHPGAVTKYREGTLKSLDEVLVSDVVFTDYHKRLRASELELKSVFGENYNKEEVLDKILRKGDFQLSAAERRQKLEQKRNEIIEYVHKNFVDPKTHLPIPRMRIEQALETVRPRIDMDQSADRQVALMMSKLSACMPMKKHQ--VEGTLRVPHGVLGASNAVIRSYCTVAREHYTSEGAVLEIMISPGDYDAFIKALNNASKGNFHLDIAGAAAS 232          
BLAST of Gchil7245.t1 vs. uniprot
Match: A0A1X6NJU9_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NJU9_PORUM)

HSP 1 Score: 164 bits (414), Expect = 9.020e-46
Identity = 103/224 (45.98%), Postives = 137/224 (61.16%), Query Frame = 0
Query:    4 MLVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSFQTDDV-MQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVYLD-GCPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYR-DKAKYDVEI--HSYELLMSDLARVTKGDFEFNL 222
            MLVR K GKTT+E++  EG  AKYR G +  I+DVVVT  VFTN SKG +AS +QL ++F  D     I++ I+ KG+ Q SA ER +K D +R E++  + K YV      P+PL R ENAL QI+ RID D  A RQ   + +KL  VMPM+K    +EG + VP    G  +GV+ KH  + RE +     KYD+ +   +Y+ LMS LA+ TKGDF F L
Sbjct:    1 MLVRRKVGKTTFELLTHEGAAAKYRAGDLSSIDDVVVTDTVFTNQSKGQRASQDQLTAAFGEDATPASILKAIISKGDLQTSAAERTAKADQRRREVLEHLTKYYVDPSRNLPIPLTRFENALTQIKARID-DRPADRQAEELVRKLVDVMPMRKLT--MEGVLRVPHAHLGAAAGVIIKHAKINREGHEAGGVKYDISVVPGAYDGLMSALAKATKGDFTFEL 221          
BLAST of Gchil7245.t1 vs. uniprot
Match: A0A7J7IF00_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IF00_9RHOD)

HSP 1 Score: 158 bits (400), Expect = 3.890e-44
Identity = 92/225 (40.89%), Postives = 144/225 (64.00%), Query Frame = 0
Query:    3 EMLVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSF-QTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVYLDG-CPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYRDK-AKYDVEIH--SYELLMSDLARVTKGDFEFNL 222
            EMLVR +  K  +EV    G V KYR+G ++ +EDV+VT V+FT++ KG +AS ++L S+F +     +++E+I+++G+ Q SA ER+ K++ KR+EI+  I KN+V      PLP +R+E AL  I PRID+D+ A RQV  +  KL   MPMKK++  +EGT+ +P  + G  + +VR +CTV RE Y  + A  D+ I    Y+  +  L + +KG+F F++
Sbjct:    4 EMLVRFRHNKYNFEVATVPGTVTKYREGLLRSLEDVLVTDVIFTDYHKGARASDKELQSAFGEGFKKEEVLERIVRRGDFQLSASERRQKLEQKRNEIIEYIHKNFVDPKSRLPLPRMRVEQALETIHPRIDMDLPADRQVAQLMSKLVVCMPMKKHQ--VEGTLRLPHSVLGASNAIVRSYCTVSREHYTGEGAVLDIMIAPGDYDAFIKALNQASKGNFHFDV 226          
BLAST of Gchil7245.t1 vs. uniprot
Match: A0A6T6PBS1_9RHOD (Hypothetical protein (Fragment) n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A6T6PBS1_9RHOD)

HSP 1 Score: 129 bits (324), Expect = 3.120e-34
Identity = 70/135 (51.85%), Postives = 95/135 (70.37%), Query Frame = 0
Query:    1 MPEMLVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSFQTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVY-LDGCPLPLVRIENALNQIRPRIDVD 134
            MP+MLVR KKGKT +E++ +EG V++YR+GT+K  +DVVV  V+FTN SKG +AS EQL S+F TD++ + +E+IL  GE Q S  ERK+K++ KR EIV   +K YV      PLP  RI+ AL Q + R+D D
Sbjct:    1 MPDMLVRYKKGKTNFEIITKEGSVSQYREGTIKNTDDVVVANVIFTNHSKGERASDEQLRSAFDTDNLSKCLEKILFTGEPQLSVAERKAKVEQKRKEIVDYFRKYYVEPRTKLPLPPQRIDAALTQAKIRVDPD 135          
BLAST of Gchil7245.t1 vs. uniprot
Match: L8HCP3_ACACA (rRNA metabolism protein, SBDS family n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HCP3_ACACA)

HSP 1 Score: 126 bits (317), Expect = 1.200e-31
Identity = 78/224 (34.82%), Postives = 131/224 (58.48%), Query Frame = 0
Query:    5 LVRLKKGKT-TYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSFQTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVY-LDGCPLPLVRIENALNQIRPRIDVDVDALRQVNA-MYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYRDKA---KYDVEIHSYELLMSDLARVTKGDFEFNL 222
            +VR K G T T+EV+ ++G   ++R+G +    +V+    ++TN SKG +A    L  +F T ++    + +++KGE Q +A ER+ K++ ++ E+++ I K Y+      P P+VRIENA  Q++  +D DV A RQV   + +KL  ++P+K  RS + GT+ +PT + GQ  G V+K+  V  E Y   A   +  +    Y+  M+DL  VTKG+F F++
Sbjct:    7 VVRYKAGDTGTFEVLTKKGAALQFREGKLG-FSNVLFADEIYTNHSKGERAKEADLLKAFGTSNIEDCAKVVVEKGELQLTAAERREKVNKRKAEMINYIHKYYIDPRTKTPHPVVRIENAFEQMKVNVDPDVPAERQVQEKVLKKLPEILPIK--RSEMSGTLSIPTKVIGQAMGTVKKYAQVSGENYSSGAATMQVSIVPGDYDAFMTDLRNVTKGEFTFDV 227          
BLAST of Gchil7245.t1 vs. uniprot
Match: A0A6A7G9A2_9CRUS (Shwachman-Bodian-Diamond protein-like protein (Fragment) n=1 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G9A2_9CRUS)

HSP 1 Score: 124 bits (310), Expect = 1.550e-30
Identity = 78/229 (34.06%), Postives = 137/229 (59.83%), Query Frame = 0
Query:    5 LVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSFQTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVY-LDGCPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYRDKA-KYDVEIH--SYELLMSDLARVTKGDFEFNLITNAAAV 229
            LVRLK  +  +EV  + G V K+R+G +  +++V+VT V+F+NF+KG +A +  + S+F+T+D+ + +E+IL++G  Q SA E++ ++  K+  IV  I KN++      P P VRIE AL+  + R+D   +  +QV+   + L  V+ +KK  S +EGT+++     G  S +V    ++LRE Y  +  K+ +E+    ++   S L +VTKGD+++   +   AV
Sbjct:   28 LVRLKTKQHNFEVATKPGTVKKWREGKLG-LDNVLVTDVIFSNFTKGDRARTADVTSAFETEDLNECMERILREGTVQVSAAEKREEIVKKKKNIVYLIHKNFINPKTNQPHPTVRIETALDGSKFRVDPMKEPEQQVSGAVKALIGVLTLKK--STIEGTLVLTHKYVGSCSNIVHSKASILREDYTSEGIKWRLELSPGDFDDFQSGLNKVTKGDYQWIPSSGGVAV 253          
BLAST of Gchil7245.t1 vs. uniprot
Match: A0A6B2L9Q9_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L9Q9_9EUKA)

HSP 1 Score: 115 bits (289), Expect = 4.920e-27
Identity = 71/221 (32.13%), Postives = 127/221 (57.47%), Query Frame = 0
Query:    5 LVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSKGTKASSEQLNSSFQTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIVSAIQKNYVY-LDGCPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSAVMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETY--RDKAKYDVEI--HSYELLMSDLARVTKGDFEF 220
            +VR K+GK T+EV  + G V KYR     ++ D+++T  ++ +  K  +AS  +L  SF      ++++ IL+KG  Q + GERK  ++ KR+EI++ I K Y+       +P+ RI+NALN+++ RID D+    QV  + +KL  V+ +K  R+ + G V         V+GV +++   +R+ +   + A++ + +    Y+ ++SDL   TKG+F+F
Sbjct:    3 VVRYKQGKHTFEVGCKVGSVMKYRKTGQGQLNDILITKDIWKDIKKADRASEHELEDSFGKIPHDEMLKAILEKGHLQLTDGERKEILEKKRNEIINYIHKYYIDPKTKTMIPVARIDNALNEVKARIDPDIATETQVQEILKKLPGVLTLK--RAEITGVVKTTHQFIANVTGVFKRYNIAIRQEHFSSEGAEFSISMVPGDYDKVISDLNTATKGEFDF 221          
The following BLAST results are available for this feature:
BLAST of Gchil7245.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2V3J428_9FLOR7.560e-12280.26Ribosome maturation protein SDO1-like n=1 Tax=Grac... [more]
A0A7S3A2T3_9RHOD7.550e-5646.90Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
M2W0Y8_GALSU5.220e-5043.50Uncharacterized protein n=1 Tax=Galdieria sulphura... [more]
M1VF53_CYAM12.200e-4641.99Uncharacterized protein n=2 Tax=cellular organisms... [more]
A0A1X6NJU9_PORUM9.020e-4645.98Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7J7IF00_9RHOD3.890e-4440.89Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
A0A6T6PBS1_9RHOD3.120e-3451.85Hypothetical protein (Fragment) n=1 Tax=Rhodosorus... [more]
L8HCP3_ACACA1.200e-3134.82rRNA metabolism protein, SBDS family n=1 Tax=Acant... [more]
A0A6A7G9A2_9CRUS1.550e-3034.06Shwachman-Bodian-Diamond protein-like protein (Fra... [more]
A0A6B2L9Q9_9EUKA4.920e-2732.13Uncharacterized protein n=1 Tax=Arcella intermedia... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilyGENE3D1.10.10.900coord: 84..155
e-value: 7.4E-12
score: 46.9
IPR037188Ribosome maturation protein Sdo1/SBDS, central domain superfamilySUPERFAMILY109728Hypothetical protein AF0491, middle domaincoord: 77..148
IPR019783Ribosome maturation protein Sdo1/SBDS, N-terminalPFAMPF01172SBDScoord: 5..89
e-value: 3.4E-23
score: 81.5
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilyGENE3D3.30.1250.10coord: 4..82
e-value: 1.7E-22
score: 81.2
IPR036786Ribosome maturation protein SBDS, N-terminal domain superfamilySUPERFAMILY89895FYSH domaincoord: 4..82
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 234..254
IPR039100Ribosome maturation protein Sdo1/SBDS-likePANTHERPTHR10927RIBOSOME MATURATION PROTEIN SBDScoord: 5..226

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:850203..850967 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7245.t1Gchil7245.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 850203..850967 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7245.t1 ID=Gchil7245.t1|Name=Gchil7245.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=255bp
MPEMLVRLKKGKTTYEVMVEEGMVAKYRDGTVKRIEDVVVTPVVFTNFSK
GTKASSEQLNSSFQTDDVMQIIEQILKKGEAQESAGERKSKMDAKRHEIV
SAIQKNYVYLDGCPLPLVRIENALNQIRPRIDVDVDALRQVNAMYQKLSA
VMPMKKYRSGLEGTVIVPTHMAGQVSGVVRKHCTVLRETYRDKAKYDVEI
HSYELLMSDLARVTKGDFEFNLITNAAAVASSSNSTGAAASSSAKKGKGK
KKRK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037188Sdo1/SBDS_central_sf
IPR019783Ribosome_mat_Sdo1/SBDS_N
IPR036786Ribosome_mat_SBDS_N_sf
IPR039100Sdo1/SBDS-like