Gchil7246.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7246.t1
Unique NameGchil7246.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length180
Homology
BLAST of Gchil7246.t1 vs. uniprot
Match: A0A2V3J4L8_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J4L8_9FLOR)

HSP 1 Score: 216 bits (549), Expect = 7.590e-69
Identity = 110/176 (62.50%), Postives = 135/176 (76.70%), Query Frame = 0
Query:    4 EVCAFTSFCPLGKRSFIPVIITSSKSSPLAHEKRVRRVRAPSWRASGIPEPERTGSSADDERLNKELQAKVRELFGSRNNVTIDINRDSDVQFMVQKEDPVAEARQRKSAWTVVWSVGVLSLTAGILFTALYYSGAVHGSLDSDKRYEMPMYGSRSYIDPYQLLEEGRRAQDSTAQ 179
            E  AF    P+  RS        S++SP  + KR   VRA SWRASGIPEPE TGSSADDERL++ELQAKV ELFGSRNN+TID+N DSDVQF+VQ+     EARQ+++AW+V+ SV V+S+ AG+LFTA+YY+GAVHGS DSD RYEMP YG++SYIDPY+LLEE R+ Q+S  Q
Sbjct:    2 EYYAFAGAVPVLPRSNRLKSAIVSEASPFTYRKRPHIVRASSWRASGIPEPESTGSSADDERLSQELQAKVTELFGSRNNITIDMNTDSDVQFIVQRSVASTEARQKRAAWSVIISVAVISVAAGVLFTAMYYAGAVHGSEDSDGRYEMPTYGTQSYIDPYRLLEEDRQIQESKTQ 177          
BLAST of Gchil7246.t1 vs. uniprot
Match: R7Q2I8_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7Q2I8_CHOCR)

HSP 1 Score: 154 bits (390), Expect = 9.370e-45
Identity = 80/149 (53.69%), Postives = 108/149 (72.48%), Query Frame = 0
Query:   27 SKSSPLAHEKRVRRVRAPSWRASGIPEPERTGSSADDERLNKELQAKVRELFGSRNNVTIDINRDSDVQFMVQKEDPVAEARQRKSAWTVVWSVGVLSLTAGILFTALYYSGAVHGSLDSDKRYEMPMYGSRSYIDPYQLLEEGRRAQD 175
            SK++ + H  RV+  R   W AS IPEPE+ G++ADD+ LN EL+ KV ELFGSR NV+I++  DS+VQF V+K +   E RQ K+AW+V+ SV  LS+ AGI F  LY +GAVHGS  +++RY+MP +G+ SYIDPY+LLEE  + QD
Sbjct:   23 SKTTRVYHANRVKVSRR--WHASSIPEPEQGGNTADDDALNLELRNKVNELFGSRQNVSIEMEADSNVQFRVRKREVEYEYRQTKAAWSVIGSVAALSVAAGIAFIVLYATGAVHGS-PNERRYDMPTFGTTSYIDPYELLEEESQFQD 168          
BLAST of Gchil7246.t1 vs. uniprot
Match: A0A7S3ECR1_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3ECR1_9RHOD)

HSP 1 Score: 79.0 bits (193), Expect = 2.190e-15
Identity = 46/116 (39.66%), Postives = 70/116 (60.34%), Query Frame = 0
Query:   58 GSSADDERLNKELQAKVRELFGSRNNVTID---INRDSDVQFMVQKE-DPV-AEAR-QRKSAWTVVWSVGVLSLTAGILFTALYYSGAVHGSLDSDKRYEMPMYGSRSYIDPYQLL 167
            G+  DD++LN ELQ +V+ELFGS    +++     ++ +  F  Q   DP+ A +R  R+ A   + S+ V+S+ AGILFT L+ SG +H +      Y MP YG+ SYI+P +LL
Sbjct:   30 GNDMDDQQLNAELQRRVKELFGSSRRESVNGAADRKEGEYSFEPQNSRDPLRAPSRGSRQDALFTLTSIAVMSVIAGILFTFLFESGYIHDASQDRPYYNMPTYGTTSYIEPVELL 145          
BLAST of Gchil7246.t1 vs. uniprot
Match: A0A7S0BVD9_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S0BVD9_9RHOD)

HSP 1 Score: 63.2 bits (152), Expect = 8.800e-10
Identity = 37/101 (36.63%), Postives = 58/101 (57.43%), Query Frame = 0
Query:   73 KVRELFGSRNNVTID---INRDSDVQFMVQ-KEDPVAEARQ--RKSAWTVVWSVGVLSLTAGILFTALYYSGAVHGSLDSDKRYEMPMYGSRSYIDPYQLL 167
            +V+ELFG     +++     R+ +  F  Q K DP++   +  R+ A   + S+ V+S+ AGILFT L+ SG +H +      Y MP YG+ SYI+P +LL
Sbjct:    2 RVKELFGGAQRESLNGAADRREGEYSFEPQNKRDPLSAPSRGSRQDALFTLTSIAVMSVIAGILFTFLFESGYIHDASQERPYYNMPTYGTTSYIEPVELL 102          
BLAST of Gchil7246.t1 vs. uniprot
Match: M1VA14_CYAM1 (Uncharacterized protein n=1 Tax=Cyanidioschyzon merolae (strain 10D) TaxID=280699 RepID=M1VA14_CYAM1)

HSP 1 Score: 63.2 bits (152), Expect = 4.820e-9
Identity = 46/139 (33.09%), Postives = 76/139 (54.68%), Query Frame = 0
Query:   47 RASG-IPEPERTGSSADDE------RLNKELQAKVRELFGSRNNVT---IDINRDSDVQFMVQKEDP-------VAEARQRKSAWTVVWSVGVLSLTAGILFTALYYSGAVHGSLDSDKRYEMPMYGSRSYIDPYQLLE 168
            RASG  P+      S DD+       L + L+ +VR+L+GS        +   +DS ++  +++E         V   ++R  A  VV S+  LS+ +G+LF  +Y +GAVHG   S  +++ P+YG+ SY++PY+LLE
Sbjct:   57 RASGPFPDGPENPISPDDQPDGSDSALLESLRRRVRDLYGSEEAPVAGRVPPTKDSALEAPLRRERGGRTVRTYVRAQQERSQALFVVGSIFFLSILSGVLFVFIYGAGAVHGGGHS-VQHKPPIYGTDSYVNPYELLE 194          
The following BLAST results are available for this feature:
BLAST of Gchil7246.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A2V3J4L8_9FLOR7.590e-6962.50Uncharacterized protein n=1 Tax=Gracilariopsis cho... [more]
R7Q2I8_CHOCR9.370e-4553.69Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7S3ECR1_9RHOD2.190e-1539.66Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A7S0BVD9_9RHOD8.800e-1036.63Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
M1VA14_CYAM14.820e-933.09Uncharacterized protein n=1 Tax=Cyanidioschyzon me... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 44..65
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..115
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 137..179
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 116..136
NoneNo IPR availableTMHMMTMhelixcoord: 114..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:851129..851668 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7246.t1Gchil7246.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 851129..851668 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7246.t1 ID=Gchil7246.t1|Name=Gchil7246.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=180bp
MVWEVCAFTSFCPLGKRSFIPVIITSSKSSPLAHEKRVRRVRAPSWRASG
IPEPERTGSSADDERLNKELQAKVRELFGSRNNVTIDINRDSDVQFMVQK
EDPVAEARQRKSAWTVVWSVGVLSLTAGILFTALYYSGAVHGSLDSDKRY
EMPMYGSRSYIDPYQLLEEGRRAQDSTAQ*
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