Gchil7391.t1 (mRNA) Gracilaria chilensis NLEC103_M9 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameGchil7391.t1
Unique NameGchil7391.t1
TypemRNA
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length333
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00000007_piloncontigtig00000007_pilon:839789..840787 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7391Gchil7391Gracilaria chilensis NLEC103_M9 malegenetig00000007_pilon 839789..840787 +


The following start_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7391.t1.start1Gchil7391.t1.start1Gracilaria chilensis NLEC103_M9 malestart_codontig00000007_pilon 839789..839791 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7391.t1.CDS1Gchil7391.t1.CDS1Gracilaria chilensis NLEC103_M9 maleCDStig00000007_pilon 839789..840787 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7391.t1.exon1Gchil7391.t1.exon1Gracilaria chilensis NLEC103_M9 maleexontig00000007_pilon 839789..840787 +


The following stop_codon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7391.t1.stop1Gchil7391.t1.stop1Gracilaria chilensis NLEC103_M9 malestop_codontig00000007_pilon 840785..840787 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
Gchil7391.t1Gchil7391.t1Gracilaria chilensis NLEC103_M9 malepolypeptidetig00000007_pilon 839789..840787 +


Sequences
The following sequences are available for this feature:

mRNA sequence

>Gchil7391.t1 ID=Gchil7391.t1|Name=Gchil7391.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=333bp
MRRSSSKLITRARSLRNVSKVPFKFKFDLLIETVDKLAAQGDIVVIWERS
NNKVHCTKAVRIDKNTRKATFNNETIATDITLFKSQPSERRFQEKVVKLA
VKQNNSDGKTLGKIHLNLADYAEVPSGSKRISAELTNGAILIATVQCQFL
SMGKTIQVKAGKSETNENSHDEEDLDDDMESECNSVAADETPTGFLKNKL
KMSRASSKKLVGRSTGKNKAEEENSMQAANTVDPQSFEQLRKENQRLRKQ
LEEAGCNAAMTGDPKRTDVTKSLRNEVRELRSALAREPIYADVVKELKEA
KMALALLHLEKEEVLFELMKYQRGENTPRNSV*
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spliced messenger RNA

>Gchil7391.t1 ID=Gchil7391.t1|Name=Gchil7391.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=999bp|location=Sequence derived from alignment at tig00000007_pilon:839789..840787+ (Gracilaria chilensis NLEC103_M9 male)|Notes=Excludes all bases but those of type(s): exon.  
ATGAGGCGTTCGTCGTCAAAGCTAATAACTCGCGCAAGAAGTTTGCGCAA
TGTGAGCAAAGTTCCTTTCAAGTTCAAGTTCGACTTGCTCATCGAAACTG
TGGATAAACTCGCCGCCCAAGGGGACATCGTTGTCATCTGGGAAAGATCC
AACAACAAGGTCCACTGCACAAAGGCCGTCAGAATTGACAAGAACACGAG
AAAGGCCACTTTCAACAATGAAACGATTGCCACTGACATCACCTTGTTCA
AGAGTCAGCCGTCGGAACGTCGCTTCCAAGAAAAGGTTGTCAAACTAGCA
GTGAAGCAGAACAACTCTGATGGTAAGACGCTTGGAAAAATTCATCTAAA
TCTTGCCGACTATGCCGAAGTGCCCTCAGGGTCGAAGAGAATCAGCGCCG
AGCTGACGAATGGAGCCATCCTCATCGCCACCGTGCAGTGCCAGTTTCTA
TCAATGGGAAAGACAATTCAGGTGAAGGCAGGAAAATCAGAAACCAACGA
GAATTCGCATGACGAAGAAGACCTCGACGATGACATGGAAAGCGAGTGCA
ACTCCGTAGCGGCCGACGAAACTCCCACTGGTTTCTTGAAGAACAAACTC
AAGATGTCCCGTGCCAGCTCCAAAAAACTAGTTGGGCGCTCCACAGGCAA
GAATAAGGCAGAAGAAGAGAATAGTATGCAAGCAGCAAACACTGTTGACC
CACAAAGTTTTGAGCAACTGCGAAAGGAAAACCAACGGCTTAGGAAACAA
CTAGAAGAGGCGGGATGTAACGCCGCAATGACGGGCGACCCCAAACGGAC
TGATGTCACCAAGTCGCTTAGGAACGAGGTCCGGGAGCTTCGAAGCGCGC
TTGCAAGAGAGCCAATCTATGCTGACGTCGTCAAGGAACTAAAAGAGGCA
AAGATGGCGCTAGCGCTGCTTCACCTCGAGAAGGAAGAAGTTCTGTTCGA
GCTAATGAAATACCAAAGAGGAGAAAACACTCCTAGGAACTCAGTATGA
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protein sequence of Gchil7391.t1

>Gchil7391.t1 ID=Gchil7391.t1|Name=Gchil7391.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=333bp
MRRSSSKLITRARSLRNVSKVPFKFKFDLLIETVDKLAAQGDIVVIWERS
NNKVHCTKAVRIDKNTRKATFNNETIATDITLFKSQPSERRFQEKVVKLA
VKQNNSDGKTLGKIHLNLADYAEVPSGSKRISAELTNGAILIATVQCQFL
SMGKTIQVKAGKSETNENSHDEEDLDDDMESECNSVAADETPTGFLKNKL
KMSRASSKKLVGRSTGKNKAEEENSMQAANTVDPQSFEQLRKENQRLRKQ
LEEAGCNAAMTGDPKRTDVTKSLRNEVRELRSALAREPIYADVVKELKEA
KMALALLHLEKEEVLFELMKYQRGENTPRNSV*
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mRNA from alignment at tig00000007_pilon:839789..840787+

Legend: start_codonpolypeptideCDSexonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gchil7391.t1 ID=Gchil7391.t1|Name=Gchil7391.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=mRNA|length=999bp|location=Sequence derived from alignment at tig00000007_pilon:839789..840787+ (Gracilaria chilensis NLEC103_M9 male)
ATGAGGCGTTCGTCGTCAAAGCTAATAACTCGCGCAAGAAGTTTGCGCAA
TGTGAGCAAAGTTCCTTTCAAGTTCAAGTTCGACTTGCTCATCGAAACTG
TGGATAAACTCGCCGCCCAAGGGGACATCGTTGTCATCTGGGAAAGATCC
AACAACAAGGTCCACTGCACAAAGGCCGTCAGAATTGACAAGAACACGAG
AAAGGCCACTTTCAACAATGAAACGATTGCCACTGACATCACCTTGTTCA
AGAGTCAGCCGTCGGAACGTCGCTTCCAAGAAAAGGTTGTCAAACTAGCA
GTGAAGCAGAACAACTCTGATGGTAAGACGCTTGGAAAAATTCATCTAAA
TCTTGCCGACTATGCCGAAGTGCCCTCAGGGTCGAAGAGAATCAGCGCCG
AGCTGACGAATGGAGCCATCCTCATCGCCACCGTGCAGTGCCAGTTTCTA
TCAATGGGAAAGACAATTCAGGTGAAGGCAGGAAAATCAGAAACCAACGA
GAATTCGCATGACGAAGAAGACCTCGACGATGACATGGAAAGCGAGTGCA
ACTCCGTAGCGGCCGACGAAACTCCCACTGGTTTCTTGAAGAACAAACTC
AAGATGTCCCGTGCCAGCTCCAAAAAACTAGTTGGGCGCTCCACAGGCAA
GAATAAGGCAGAAGAAGAGAATAGTATGCAAGCAGCAAACACTGTTGACC
CACAAAGTTTTGAGCAACTGCGAAAGGAAAACCAACGGCTTAGGAAACAA
CTAGAAGAGGCGGGATGTAACGCCGCAATGACGGGCGACCCCAAACGGAC
TGATGTCACCAAGTCGCTTAGGAACGAGGTCCGGGAGCTTCGAAGCGCGC
TTGCAAGAGAGCCAATCTATGCTGACGTCGTCAAGGAACTAAAAGAGGCA
AAGATGGCGCTAGCGCTGCTTCACCTCGAGAAGGAAGAAGTTCTGTTCGA
GCTAATGAAATACCAAAGAGGAGAAAACACTCCTAGGAACTCAGTATGA
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Coding sequence (CDS) from alignment at tig00000007_pilon:839789..840787+

>Gchil7391.t1 ID=Gchil7391.t1|Name=Gchil7391.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=CDS|length=999bp|location=Sequence derived from alignment at tig00000007_pilon:839789..840787+ (Gracilaria chilensis NLEC103_M9 male)
ATGAGGCGTTCGTCGTCAAAGCTAATAACTCGCGCAAGAAGTTTGCGCAA
TGTGAGCAAAGTTCCTTTCAAGTTCAAGTTCGACTTGCTCATCGAAACTG
TGGATAAACTCGCCGCCCAAGGGGACATCGTTGTCATCTGGGAAAGATCC
AACAACAAGGTCCACTGCACAAAGGCCGTCAGAATTGACAAGAACACGAG
AAAGGCCACTTTCAACAATGAAACGATTGCCACTGACATCACCTTGTTCA
AGAGTCAGCCGTCGGAACGTCGCTTCCAAGAAAAGGTTGTCAAACTAGCA
GTGAAGCAGAACAACTCTGATGGTAAGACGCTTGGAAAAATTCATCTAAA
TCTTGCCGACTATGCCGAAGTGCCCTCAGGGTCGAAGAGAATCAGCGCCG
AGCTGACGAATGGAGCCATCCTCATCGCCACCGTGCAGTGCCAGTTTCTA
TCAATGGGAAAGACAATTCAGGTGAAGGCAGGAAAATCAGAAACCAACGA
GAATTCGCATGACGAAGAAGACCTCGACGATGACATGGAAAGCGAGTGCA
ACTCCGTAGCGGCCGACGAAACTCCCACTGGTTTCTTGAAGAACAAACTC
AAGATGTCCCGTGCCAGCTCCAAAAAACTAGTTGGGCGCTCCACAGGCAA
GAATAAGGCAGAAGAAGAGAATAGTATGCAAGCAGCAAACACTGTTGACC
CACAAAGTTTTGAGCAACTGCGAAAGGAAAACCAACGGCTTAGGAAACAA
CTAGAAGAGGCGGGATGTAACGCCGCAATGACGGGCGACCCCAAACGGAC
TGATGTCACCAAGTCGCTTAGGAACGAGGTCCGGGAGCTTCGAAGCGCGC
TTGCAAGAGAGCCAATCTATGCTGACGTCGTCAAGGAACTAAAAGAGGCA
AAGATGGCGCTAGCGCTGCTTCACCTCGAGAAGGAAGAAGTTCTGTTCGA
GCTAATGAAATACCAAAGAGGAGAAAACACTCCTAGGAACTCAGTATGA
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