Gchil7294.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	Gchil7294.t1
Unique Name	Gchil7294.t1
Type	polypeptide
Organism	Gracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length	262

Homology

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BLAST of Gchil7294.t1 vs. uniprot
Match: A0A2V3J3M2_9FLOR (Uncharacterized protein n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3M2_9FLOR)

HSP 1 Score: 311 bits (798), Expect = 4.150e-104
Identity = 167/261 (63.98%), Postives = 207/261 (79.31%), Query Frame = 0

Query:    1 MLVMLGTMYLLRKVDQEEPIVLFYARLAFVAYILVVTSLYSLLHWRITSRCDVTPVTVPLKPKSPSLREAMEQAQKSAEDQSETTEASETTDDKGNKAGEDKKEDSNSEEPKTETITVMEYDLRMLAGARKSWAMNCLILAAINYKTESVSAIVMSPFMTLMKLVTEDPLFLIHVCGAPAVEKLKRPFPVAENPLAAMFKDMAPKDPSQTGQPKNDKPVVEELHGESESEEEDSGPTKLTDLADDHIKSDFDEEEEPKKTK 261
            MLVM+GTMY+LRKVDQEEP+VL YARLAFVAY++VVTSLYSLLHWRITSRCD++PVTVPL  K+PS +EAM+Q +K+AE+Q   +  ++T  +                     TIT MEYDLR L+ AR+SW MNCLILAA+NYKTESVSAIV+SP MTL++ VTEDPLFLIHV G+PAV+KLKRPF  +E+P A + K+MAPK+P++  + K DK  VE+LH + ESEEED+GPT+LT+L DDHIKSDFDE++EPKKTK
Sbjct:    6 MLVMVGTMYMLRKVDQEEPVVLLYARLAFVAYLIVVTSLYSLLHWRITSRCDLSPVTVPLNAKAPSFQEAMDQMKKAAEEQQPQSSEAKTESEXXXXXX-----XXXXXXXXXXTITTMEYDLRTLSSARRSWVMNCLILAAVNYKTESVSAIVISPLMTLLRFVTEDPLFLIHVAGSPAVDKLKRPFTPSESPFATLLKEMAPKEPTEDQKKKKDKQPVEDLHDDGESEEEDNGPTRLTELKDDHIKSDFDEDDEPKKTK 261

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BLAST of Gchil7294.t1 vs. uniprot
Match: A0A5J4YJI0_PORPP (Uncharacterized protein n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YJI0_PORPP)

HSP 1 Score: 77.0 bits (188), Expect = 5.460e-13
Identity = 60/201 (29.85%), Postives = 98/201 (48.76%), Query Frame = 0

Query:    1 MLVMLGTMYLLRKVDQEEPIVLFYARLAFVAYILVVTSLYSLLHWRITSRCDVTPVTVPL--KPKSPSLREAMEQAQKSAEDQSETTEASETTDDKGNKAGEDKKEDSNSEEPKTETITVMEYDLRMLAGARKSWAMNCLILAAINYKTESVSAIVMSPFMTLMKLVTEDPLFLIHVCGAPAVEKLKRPFPVAENPLAAMF 199
            M+++LG M  ++ +DQE+P  L   R  ++ Y L++ + +  LH  +T + D   + VP+   P S +  +A                AS                      P+ E  TV +YD+ +L   RK+   N  ++A +++K  SVS +V+S  M ++K V+++ LF +HV GA    KL+RPFP   NPL AM 
Sbjct:   11 MVIVLGVMSYMKNLDQEDPKTLLLCRGVYLVYALLMLAYHLYLHTVVTKKNDQRKIKVPVVANPWSQAQAQAXXXXXXDXXRXXXXXXAS----------------------PEEEEKTVRDYDMGILVAQRKALLTNMAMMAFVHFKMGSVSPLVVSSVMGILK-VSDEHLFKLHVLGAAEEGKLERPFPTEPNPLMAML 188

The following BLAST results are available for this feature:

BLAST of Gchil7294.t1 vs. uniprot

BLAST of Gchil7294.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A2V3J3M2_9FLOR	4.150e-104	63.98	Uncharacterized protein n=1 Tax=Gracilariopsis cho...	[more]
A0A5J4YJI0_PORPP	5.460e-13	29.85	Uncharacterized protein n=1 Tax=Porphyridium purpu...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012098	SRP-independent targeting protein 3	PFAM	PF10032	Pho88	coord: 1..72 e-value: 5.3E-9 score: 35.6 coord: 102..222 e-value: 5.8E-14 score: 51.8
IPR012098	SRP-independent targeting protein 3	PANTHER	PTHR28112	SRP-INDEPENDENT TARGETING PROTEIN 3	coord: 107..212 coord: 1..80
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 199..261
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 64..114
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 217..261
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 44..261
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 20..43
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..19
None	No IPR available	TMHMM	TMhelix		coord: 20..42

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
tig00004441_pilon	contig	tig00004441_pilon:977042..977827 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-06-01
Diamond blastp: OGS1.0 vs UniRef90	2022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.0	2022-05-09

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
Gchil7294.t1	Gchil7294.t1	Gracilaria chilensis NLEC103_M9 male	mRNA	tig00004441_pilon 977042..977827 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Gchil7294.t1 ID=Gchil7294.t1|Name=Gchil7294.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=262bp
MLVMLGTMYLLRKVDQEEPIVLFYARLAFVAYILVVTSLYSLLHWRITSR
CDVTPVTVPLKPKSPSLREAMEQAQKSAEDQSETTEASETTDDKGNKAGE
DKKEDSNSEEPKTETITVMEYDLRMLAGARKSWAMNCLILAAINYKTESV
SAIVMSPFMTLMKLVTEDPLFLIHVCGAPAVEKLKRPFPVAENPLAAMFK
DMAPKDPSQTGQPKNDKPVVEELHGESESEEEDSGPTKLTDLADDHIKSD
FDEEEEPKKTK*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012098	SND3_fun