Gchil7142.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7142.t1
Unique NameGchil7142.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length189
Homology
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BLAST of Gchil7142.t1 vs. uniprot
Match: A0A2V3IP30_9FLOR (Mitotic spindle assembly checkpoint protein MAD2B n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IP30_9FLOR)

HSP 1 Score: 122 bits (306), Expect = 2.580e-31
Identity = 76/193 (39.38%), Postives = 107/193 (55.44%), Query Frame = 0 
Query:    1 MFEMREKYGVGTFRSTHPRVNDYVARTMGALRGWLECDAVRSVAVVVLQGEQHRVIARYTFETRVVARHAHDVSDVALAALDDALRAQLCRVL-HHGAEELSLAAACSPAELQQQQQQRTFDVIVSTSGVHADARWMRA-------------SAREQHSVSSPV-------LTVALKDADEVACTARVQSWLQ 172
            MFE+REKYGVGTF S H  VN Y+  T+ +L  W   D +  +A+ V + +  + IARY FET VVAR+  DV+  +LA +D+A RA LCRVL + GA ++   +A    E +  Q + +FD +V T GVH D  WM A             +A E    + PV       + + LKDAD  + T R++S L+
Sbjct:   37 MFELREKYGVGTFYSKHEAVNTYIKDTVQSLHAWFMKDLIEWIAIAVYECQSQKSIARYVFETSVVARNEEDVNAASLACVDNAFRAHLCRVLSNRGATDVRDESA---DEKRGDQSELSFDYVVGTKGVHTDENWMPADGGERREPRWRSGTAEEGGPTAPPVAVPPAHAVCIPLKDADLASATLRLRSRLE 226
The following BLAST results are available for this feature:
BLAST of Gchil7142.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2V3IP30_9FLOR2.580e-3139.38Mitotic spindle assembly checkpoint protein MAD2B ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036570HORMA domain superfamilyGENE3D3.30.900.10HORMA domaincoord: 1..184
e-value: 1.7E-18
score: 68.8
IPR036570HORMA domain superfamilySUPERFAMILY56019The spindle assembly checkpoint protein mad2coord: 2..141
IPR045091Mad2-likePANTHERPTHR11842MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2coord: 2..145

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:341127..341693 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7142.t1Gchil7142.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 341127..341693 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7142.t1 ID=Gchil7142.t1|Name=Gchil7142.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=189bp
MFEMREKYGVGTFRSTHPRVNDYVARTMGALRGWLECDAVRSVAVVVLQG
EQHRVIARYTFETRVVARHAHDVSDVALAALDDALRAQLCRVLHHGAEEL
SLAAACSPAELQQQQQQRTFDVIVSTSGVHADARWMRASAREQHSVSSPV
LTVALKDADEVACTARVQSWLQLPSRASSSHARSTRDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036570HORMA_dom_sf
IPR045091Mad2-like