Gchil7192.t1 (polypeptide) Gracilaria chilensis NLEC103_M9 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameGchil7192.t1
Unique NameGchil7192.t1
Typepolypeptide
OrganismGracilaria chilensis NLEC103_M9 male (Gracilaria chilensis NLEC103_M9 male)
Sequence length99
Homology
BLAST of Gchil7192.t1 vs. uniprot
Match: A0A2V3INA0_9FLOR (Photosystem I subunit O n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3INA0_9FLOR)

HSP 1 Score: 173 bits (439), Expect = 6.350e-54
Identity = 78/98 (79.59%), Postives = 90/98 (91.84%), Query Frame = 0
Query:    1 MQFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNGRKSRSS 98
            M+FEIS+G++FELNPIV ALAF GWV+PSSIPT+IPLTNGTGL+QAFFAS+QENLA WPKGPA+DDPFWLL  LWH GMFAT+IFGTIGYN  K+RS+
Sbjct:   49 MEFEISEGMDFELNPIVIALAFFGWVLPSSIPTTIPLTNGTGLSQAFFASMQENLARWPKGPAIDDPFWLLLLLWHVGMFATLIFGTIGYNLSKNRSA 146          
BLAST of Gchil7192.t1 vs. uniprot
Match: A0A1X6NRI2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NRI2_PORUM)

HSP 1 Score: 144 bits (362), Expect = 3.140e-42
Identity = 62/95 (65.26%), Postives = 75/95 (78.95%), Query Frame = 0
Query:    1 MQFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNGRKS 95
            M+FEIS+   FE+NP++  LA +GW+VPSS+P  I LT GTGLTQAF AS+  NLA WPKGPA DDPFW L  +WH G+FAT+IFGTIG NGRK+
Sbjct:   46 MKFEISENTPFEINPVIIVLAMVGWIVPSSLPAPIALTGGTGLTQAFLASMNANLAAWPKGPAGDDPFWTLMFIWHAGLFATLIFGTIGVNGRKT 140          
BLAST of Gchil7192.t1 vs. uniprot
Match: A0A7S3A279_9RHOD (Hypothetical protein n=2 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A279_9RHOD)

HSP 1 Score: 142 bits (359), Expect = 7.260e-42
Identity = 64/97 (65.98%), Postives = 78/97 (80.41%), Query Frame = 0
Query:    1 MQFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNGRKSRS 97
            M+FEISDG +F+ N IV  L+ I WVVPSSIP  IPL NG+GLTQA++ASI +NL+ +PKGPALDDP+W L  +WH GMFA +IFGTIGYNG K +S
Sbjct:   41 MKFEISDGEDFDNNGIVIPLSIIAWVVPSSIPAGIPLFNGSGLTQAYWASIMDNLSRYPKGPALDDPYWTLMVMWHIGMFACLIFGTIGYNGSKRKS 137          
BLAST of Gchil7192.t1 vs. uniprot
Match: A0A7S3A276_9RHOD (Hypothetical protein n=1 Tax=Rhodosorus marinus TaxID=101924 RepID=A0A7S3A276_9RHOD)

HSP 1 Score: 140 bits (354), Expect = 1.270e-41
Identity = 63/96 (65.62%), Postives = 77/96 (80.21%), Query Frame = 0
Query:    2 QFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNGRKSRS 97
            +FEISDG +F+ N IV  L+ I WVVPSSIP  IPL NG+GLTQA++ASI +NL+ +PKGPALDDP+W L  +WH GMFA +IFGTIGYNG K +S
Sbjct:    3 RFEISDGEDFDNNGIVIPLSIIAWVVPSSIPAGIPLFNGSGLTQAYWASIMDNLSRYPKGPALDDPYWTLMVMWHIGMFACLIFGTIGYNGSKRKS 98          
BLAST of Gchil7192.t1 vs. uniprot
Match: A0A5J4YUC8_PORPP (Photosystem I subunit O n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YUC8_PORPP)

HSP 1 Score: 137 bits (344), Expect = 1.480e-39
Identity = 59/92 (64.13%), Postives = 74/92 (80.43%), Query Frame = 0
Query:    3 FEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNGRK 94
            +EIS+G  F+ NP+V  LA IGWVVPSS+P++IPL +G GLT AF ASI +NL+ WP+GP L DPFWLL  +WH G+FAT+IFGT+GYN RK
Sbjct:   46 YEISEGSSFDANPLVIGLALIGWVVPSSVPSNIPLLDGKGLTPAFVASISDNLSRWPQGPQLADPFWLLMGMWHVGLFATLIFGTVGYNLRK 137          
BLAST of Gchil7192.t1 vs. uniprot
Match: M2XWX3_GALSU (Photosystem I subunit O n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XWX3_GALSU)

HSP 1 Score: 136 bits (342), Expect = 3.900e-39
Identity = 57/95 (60.00%), Postives = 73/95 (76.84%), Query Frame = 0
Query:    2 QFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNGRKSR 96
            +F+IS+   F+ NP+V  +A +GW +P+SIP++IP+ +GTGLTQAFF SIQ NLA WPKGPALDDPFWL   LWH G+F  + FGTIGY   K+R
Sbjct:   54 EFQISEDTPFDANPLVIIVALLGWTLPASIPSNIPILHGTGLTQAFFTSIQSNLAEWPKGPALDDPFWLYMVLWHVGLFIVLFFGTIGYGISKNR 148          
BLAST of Gchil7192.t1 vs. uniprot
Match: A0A7S1HK96_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1HK96_HEMAN)

HSP 1 Score: 122 bits (307), Expect = 1.180e-33
Identity = 54/91 (59.34%), Postives = 68/91 (74.73%), Query Frame = 0
Query:    2 QFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNG 92
            +FEIS+G EF+LNPIV  LA +GW VP  +P+ IPL  G GLT A FA I E+L  +P  PA+ DPFW++  +WH+G+FATMIF TIGYNG
Sbjct:   63 KFEISEGQEFDLNPIVLVLAMLGWAVPGLLPSQIPLYGGKGLTTALFAEIGEHLQTFPVPPAMSDPFWVILFIWHSGLFATMIFATIGYNG 153          
BLAST of Gchil7192.t1 vs. uniprot
Match: A0A7S0MBX0_9CRYP (Hypothetical protein n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0MBX0_9CRYP)

HSP 1 Score: 121 bits (304), Expect = 4.210e-33
Identity = 56/94 (59.57%), Postives = 74/94 (78.72%), Query Frame = 0
Query:    2 QFEISDGVEFELNPIVFALAFIGWVVPSS-IPTSIPL--TNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNG 92
             FEISDGV++ELNP V A +F GWV+P++ IP++IPL  + G GLTQA +  I E+LA +P  PA+ DPFW++  +WH+G+FATMIFGTIGYNG
Sbjct:   69 DFEISDGVKYELNPFVLAASFYGWVLPTALIPSNIPLYGSKGVGLTQALYNEITEHLATFPTPPAISDPFWVILFIWHSGLFATMIFGTIGYNG 162          
BLAST of Gchil7192.t1 vs. uniprot
Match: A0A7J7IMB0_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IMB0_9RHOD)

HSP 1 Score: 115 bits (289), Expect = 5.170e-31
Identity = 51/91 (56.04%), Postives = 65/91 (71.43%), Query Frame = 0
Query:    2 QFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNG 92
             FEISDG ++ LNP V  +A IGW   +++P++IP+  GTGLTQAF ASIQ  LA +P GP LDDPFW    ++H G+FA +IFG IGY G
Sbjct:   55 MFEISDGEQYPLNPAVILIAIIGWSAAAAVPSNIPVLGGTGLTQAFLASIQRLLAQYPTGPKLDDPFWFYLVVYHVGLFALLIFGQIGYAG 145          
BLAST of Gchil7192.t1 vs. uniprot
Match: M1VFJ4_CYAM1 (Uncharacterized protein n=4 Tax=cellular organisms TaxID=131567 RepID=M1VFJ4_CYAM1)

HSP 1 Score: 113 bits (283), Expect = 4.190e-30
Identity = 51/91 (56.04%), Postives = 64/91 (70.33%), Query Frame = 0
Query:    2 QFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFASIQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNG 92
             FE+SDG  + LNP V  +A IGW   ++IP++IP+  GTGLTQAF ASIQ  LA +P GP LDDPFW    ++H G+FA +IFG IGY G
Sbjct:   55 MFEVSDGEPYPLNPAVIFIALIGWSAVAAIPSNIPVLGGTGLTQAFLASIQRLLAQYPTGPKLDDPFWFYLIVYHVGLFALLIFGQIGYAG 145          
The following BLAST results are available for this feature:
BLAST of Gchil7192.t1 vs. uniprot
Analysis Date: 2022-06-02 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 21
Match NameE-valueIdentityDescription
A0A2V3INA0_9FLOR6.350e-5479.59Photosystem I subunit O n=1 Tax=Gracilariopsis cho... [more]
A0A1X6NRI2_PORUM3.140e-4265.26Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S3A279_9RHOD7.260e-4265.98Hypothetical protein n=2 Tax=Rhodosorus marinus Ta... [more]
A0A7S3A276_9RHOD1.270e-4165.63Hypothetical protein n=1 Tax=Rhodosorus marinus Ta... [more]
A0A5J4YUC8_PORPP1.480e-3964.13Photosystem I subunit O n=1 Tax=Porphyridium purpu... [more]
M2XWX3_GALSU3.900e-3960.00Photosystem I subunit O n=1 Tax=Galdieria sulphura... [more]
A0A7S1HK96_HEMAN1.180e-3359.34Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A7S0MBX0_9CRYP4.210e-3359.57Hypothetical protein n=1 Tax=Cryptomonas curvata T... [more]
A0A7J7IMB0_9RHOD5.170e-3156.04Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1VFJ4_CYAM14.190e-3056.04Uncharacterized protein n=4 Tax=cellular organisms... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-06-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR36311:SF1PHOTOSYSTEM I SUBUNIT Ocoord: 16..95
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 68..90
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 32..67
NoneNo IPR availableTMHMMTMhelixcoord: 68..90
NoneNo IPR availableTMHMMTMhelixcoord: 13..35
IPR017498Photosystem I PsaOPANTHERPTHR36311PHOTOSYSTEM I SUBUNIT Ocoord: 16..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
tig00004441_piloncontigtig00004441_pilon:477337..477633 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-06-01
Diamond blastp: OGS1.0 vs UniRef902022-06-02
Gracilaria chilensis NLEC103_M9 male OGS1.02022-05-09
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
Gchil7192.t1Gchil7192.t1Gracilaria chilensis NLEC103_M9 malemRNAtig00004441_pilon 477337..477633 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Gchil7192.t1 ID=Gchil7192.t1|Name=Gchil7192.t1|organism=Gracilaria chilensis NLEC103_M9 male|type=polypeptide|length=99bp
MQFEISDGVEFELNPIVFALAFIGWVVPSSIPTSIPLTNGTGLTQAFFAS
IQENLAHWPKGPALDDPFWLLFTLWHTGMFATMIFGTIGYNGRKSRSS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR017498PSI_PsaO